BLASTX nr result

ID: Coptis24_contig00026278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026278
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461803.1| hypothetical protein SORBIDRAFT_02g008365 [S...    62   5e-08
ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [S...    61   8e-08
ref|XP_003575819.1| PREDICTED: uncharacterized protein LOC100832...    61   1e-07
ref|XP_002466964.1| hypothetical protein SORBIDRAFT_01g017470 [S...    61   1e-07
gb|EEC75162.1| hypothetical protein OsI_11378 [Oryza sativa Indi...    58   9e-07

>ref|XP_002461803.1| hypothetical protein SORBIDRAFT_02g008365 [Sorghum bicolor]
           gi|241925180|gb|EER98324.1| hypothetical protein
           SORBIDRAFT_02g008365 [Sorghum bicolor]
          Length = 611

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = -1

Query: 251 SYCEVVENNVCECFNEQIIDGRKMPIIGMFEWIRHYMIKTMNKRRTTMSNWT*KLCP 81
           S+C+ V+NN+CECFN  I+  R +PII M + IR  +I  +++ RT +  WT  +CP
Sbjct: 79  SFCDSVDNNMCECFNHWILKARFLPIISMLDGIRRQVIVRIHENRTKVEKWTSPICP 135


>ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor]
           gi|241915111|gb|EER88255.1| hypothetical protein
           SORBIDRAFT_10g010620 [Sorghum bicolor]
          Length = 981

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = -1

Query: 251 SYCEVVENNVCECFNEQIIDGRKMPIIGMFEWIRHYMIKTMNKRRTTMSNWT*KLCP--- 81
           S C+ V+NN+CE FN  I++ R  P+I M E IR  ++  + + R   +NWT  +CP   
Sbjct: 642 SNCDSVDNNICESFNNSIMEARFYPVISMCEHIRKKLMVRIQENRARAANWTGTICPNVF 701

Query: 80  -RLKM*LEENKKSYRYW 33
            +LKM +E + + Y  W
Sbjct: 702 KKLKMNIEWSGRCYVLW 718


>ref|XP_003575819.1| PREDICTED: uncharacterized protein LOC100832575 [Brachypodium
           distachyon]
          Length = 886

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/66 (39%), Positives = 40/66 (60%)
 Frame = -1

Query: 251 SYCEVVENNVCECFNEQIIDGRKMPIIGMFEWIRHYMIKTMNKRRTTMSNWT*KLCPRLK 72
           S C+ V+NN+CE FN  I+  R +PI+ M EWIR  M+  + + R+  S W   +CP + 
Sbjct: 633 SNCDSVDNNMCESFNNMILGSRYLPIVSMLEWIRRKMMVRIQECRSKTSKWKGTICPNVF 692

Query: 71  M*LEEN 54
             L++N
Sbjct: 693 KKLKQN 698


>ref|XP_002466964.1| hypothetical protein SORBIDRAFT_01g017470 [Sorghum bicolor]
           gi|241920818|gb|EER93962.1| hypothetical protein
           SORBIDRAFT_01g017470 [Sorghum bicolor]
          Length = 763

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
 Frame = -1

Query: 251 SYCEVVENNVCECFNEQIIDGRKMPIIGMFEWIRHYMIKTMNKRRTTMSNWT*KLCP--- 81
           S C+ V+N++CE FN  I++ R  P+I M E IR  ++  + + RT  SNWT  +CP   
Sbjct: 572 SNCDSVDNSICESFNNSIMEARFYPVISMCEHIRKKLMVRIQENRTRASNWTGLICPNIF 631

Query: 80  -RLKM*LEENKKSYRYW 33
            +LK+ +E + + Y  W
Sbjct: 632 KKLKINIELSARCYVLW 648


>gb|EEC75162.1| hypothetical protein OsI_11378 [Oryza sativa Indica Group]
          Length = 755

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = -1

Query: 251 SYCEVVENNVCECFNEQIIDGRKMPIIGMFEWIRHYMIKTMNKRRTTMSNWT*KLCP--- 81
           S C+ V+NN+CE FN  I+D R  P+I M E IR  ++  +   RT    W   +CP   
Sbjct: 495 SNCDSVDNNMCESFNNSIMDSRFFPVISMNEAIRCKVMVRIANNRTKADKWQGTICPNIF 554

Query: 80  -RLKM*LEENKKSYRYWAAQY 21
            +LK+ +E + + Y  W  Q+
Sbjct: 555 KKLKLNIERSGQCYVLWNGQH 575


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