BLASTX nr result

ID: Coptis24_contig00026262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026262
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532015.1| ATP-binding cassette transporter, putative [...   205   3e-51
ref|XP_003625777.1| Pleiotropic drug resistance protein [Medicag...   204   6e-51
ref|XP_003633488.1| PREDICTED: pleiotropic drug resistance prote...   202   3e-50
ref|XP_003633487.1| PREDICTED: pleiotropic drug resistance prote...   202   3e-50
ref|XP_002267345.2| PREDICTED: pleiotropic drug resistance prote...   202   3e-50

>ref|XP_002532015.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223528327|gb|EEF30370.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1211

 Score =  205 bits (522), Expect = 3e-51
 Identities = 93/144 (64%), Positives = 112/144 (77%)
 Frame = +1

Query: 1   LMESSIWVSLTYFTIGYAPSASRFFRQLLALFSVHQMALSLFRFIAAVGRIQVVAXXXXX 180
           L+ES IW+ LTY+TIG+AP+ASRFF+Q LA FSVHQMALSLFRFIAA+GR +VVA     
Sbjct: 418 LLESGIWILLTYYTIGFAPAASRFFKQFLAFFSVHQMALSLFRFIAAIGRTEVVANTLGT 477

Query: 181 XXXXXXXXXXXXXXSKNNIEPWMIWGFYISPMMYGQNAIAINEFLDNRWSTPTNDPTTHE 360
                         ++++IEPWMIWG+YISPMMYGQNAI INEFLD RWS P NDPT  +
Sbjct: 478 FTLLVVFVLGGFIVARDDIEPWMIWGYYISPMMYGQNAIVINEFLDERWSAPNNDPTFSQ 537

Query: 361 PTVGKILLRSRGMFVEDYWYWICI 432
           PTVGK+LL+ RGMF+E+YWYWI +
Sbjct: 538 PTVGKVLLKMRGMFLEEYWYWISV 561


>ref|XP_003625777.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500792|gb|AES81995.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1699

 Score =  204 bits (519), Expect = 6e-51
 Identities = 94/144 (65%), Positives = 110/144 (76%)
 Frame = +1

Query: 4    MESSIWVSLTYFTIGYAPSASRFFRQLLALFSVHQMALSLFRFIAAVGRIQVVAXXXXXX 183
            MES+IW+ LTYFTIG+APSASRFFRQ LALF +HQMALSLFRF+AAVGR  VV+      
Sbjct: 761  MESAIWIVLTYFTIGFAPSASRFFRQFLALFGIHQMALSLFRFVAAVGRTPVVSNSLSML 820

Query: 184  XXXXXXXXXXXXXSKNNIEPWMIWGFYISPMMYGQNAIAINEFLDNRWSTPTNDPTTHEP 363
                         +K++I+PWMIWG+YISP+MYGQNAIAINEFLD RWS P  D     P
Sbjct: 821  IFVVVFVLGGFIIAKDDIKPWMIWGYYISPIMYGQNAIAINEFLDKRWSKPNTDTRIDAP 880

Query: 364  TVGKILLRSRGMFVEDYWYWICIG 435
            TVGK+LL++RG+F EDYWYWICIG
Sbjct: 881  TVGKVLLKARGLFTEDYWYWICIG 904


>ref|XP_003633488.1| PREDICTED: pleiotropic drug resistance protein 2-like isoform 4
            [Vitis vinifera]
          Length = 1438

 Score =  202 bits (513), Expect = 3e-50
 Identities = 94/145 (64%), Positives = 109/145 (75%)
 Frame = +1

Query: 1    LMESSIWVSLTYFTIGYAPSASRFFRQLLALFSVHQMALSLFRFIAAVGRIQVVAXXXXX 180
            LMES IW+ LTY+TIG+APSASRFFRQLLA F VHQMALSLFRFIAA+GR Q+VA     
Sbjct: 626  LMESGIWIILTYYTIGFAPSASRFFRQLLAFFGVHQMALSLFRFIAALGRTQIVANTLGT 685

Query: 181  XXXXXXXXXXXXXXSKNNIEPWMIWGFYISPMMYGQNAIAINEFLDNRWSTPTNDPTTHE 360
                          +K++IEPWMIWG+Y SPM YGQNA+ INEFLD+RWS P  D    E
Sbjct: 686  FTLLLVFVLGGFIVAKDDIEPWMIWGYYASPMTYGQNALVINEFLDDRWSAPNIDQRIPE 745

Query: 361  PTVGKILLRSRGMFVEDYWYWICIG 435
            PTVGK LL++RGMFV+ YWYWIC+G
Sbjct: 746  PTVGKALLKARGMFVDGYWYWICVG 770


>ref|XP_003633487.1| PREDICTED: pleiotropic drug resistance protein 2-like isoform 3
            [Vitis vinifera]
          Length = 1437

 Score =  202 bits (513), Expect = 3e-50
 Identities = 94/145 (64%), Positives = 109/145 (75%)
 Frame = +1

Query: 1    LMESSIWVSLTYFTIGYAPSASRFFRQLLALFSVHQMALSLFRFIAAVGRIQVVAXXXXX 180
            LMES IW+ LTY+TIG+APSASRFFRQLLA F VHQMALSLFRFIAA+GR Q+VA     
Sbjct: 631  LMESGIWIILTYYTIGFAPSASRFFRQLLAFFGVHQMALSLFRFIAALGRTQIVANTLGT 690

Query: 181  XXXXXXXXXXXXXXSKNNIEPWMIWGFYISPMMYGQNAIAINEFLDNRWSTPTNDPTTHE 360
                          +K++IEPWMIWG+Y SPM YGQNA+ INEFLD+RWS P  D    E
Sbjct: 691  FTLLLVFVLGGFIVAKDDIEPWMIWGYYASPMTYGQNALVINEFLDDRWSAPNIDQRIPE 750

Query: 361  PTVGKILLRSRGMFVEDYWYWICIG 435
            PTVGK LL++RGMFV+ YWYWIC+G
Sbjct: 751  PTVGKALLKARGMFVDGYWYWICVG 775


>ref|XP_002267345.2| PREDICTED: pleiotropic drug resistance protein 2-like isoform 1
            [Vitis vinifera]
          Length = 1449

 Score =  202 bits (513), Expect = 3e-50
 Identities = 94/145 (64%), Positives = 109/145 (75%)
 Frame = +1

Query: 1    LMESSIWVSLTYFTIGYAPSASRFFRQLLALFSVHQMALSLFRFIAAVGRIQVVAXXXXX 180
            LMES IW+ LTY+TIG+APSASRFFRQLLA F VHQMALSLFRFIAA+GR Q+VA     
Sbjct: 631  LMESGIWIILTYYTIGFAPSASRFFRQLLAFFGVHQMALSLFRFIAALGRTQIVANTLGT 690

Query: 181  XXXXXXXXXXXXXXSKNNIEPWMIWGFYISPMMYGQNAIAINEFLDNRWSTPTNDPTTHE 360
                          +K++IEPWMIWG+Y SPM YGQNA+ INEFLD+RWS P  D    E
Sbjct: 691  FTLLLVFVLGGFIVAKDDIEPWMIWGYYASPMTYGQNALVINEFLDDRWSAPNIDQRIPE 750

Query: 361  PTVGKILLRSRGMFVEDYWYWICIG 435
            PTVGK LL++RGMFV+ YWYWIC+G
Sbjct: 751  PTVGKALLKARGMFVDGYWYWICVG 775


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