BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026246
         (1750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   373   e-100
ref|XP_003589079.1| U-box domain-containing protein [Medicago tr...   369   1e-99
ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   366   9e-99
ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4...   363   6e-98
emb|CBI19404.3| unnamed protein product [Vitis vinifera]              363   8e-98

>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 352

 Score =  373 bits (957), Expect = e-100
 Identities = 197/309 (63%), Positives = 237/309 (76%)
 Frame = +2

Query: 344  GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523
            GEF  + S S   LI  A+E+ DD I QLV  L S SID             KNK ENRL
Sbjct: 37   GEFPTASSESRRLLIACAAENSDDFIRQLVLDLESCSIDEQKQAAMEIRLLAKNKPENRL 96

Query: 524  KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703
            KI +AGA++P             EYGVTAILNLSLCDENKE++   GAIKPLV+AL+TG+
Sbjct: 97   KIVKAGALKPLISLISCSDSQLQEYGVTAILNLSLCDENKEVIASSGAIKPLVRALKTGT 156

Query: 704  TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883
            +T+KEN+ACAL RLSQ+EENK+ IGRSG+IPLLVNLL+ G  RGKKD++TALYSLCS+KE
Sbjct: 157  STAKENAACALLRLSQVEENKVAIGRSGSIPLLVNLLETGGFRGKKDAATALYSLCSVKE 216

Query: 884  NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063
            NK+RA++AGIMKPL++LMADFES MVDK+A VL++LVS  E + ALV E GIPVLVEI+E
Sbjct: 217  NKMRAVQAGIMKPLVELMADFESNMVDKSAFVLSLLVSVTEARTALVEEGGIPVLVEIIE 276

Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243
            VGS RQKEIA AILLQICE+NL+  ++V  EGAIPPLI+L +SGT+RAK+KAE+LI LLR
Sbjct: 277  VGSQRQKEIAVAILLQICEDNLMRRAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLR 336

Query: 1244 QPRPNTARA 1270
            QPR   A A
Sbjct: 337  QPRSGNAAA 345


>ref|XP_003589079.1| U-box domain-containing protein [Medicago truncatula]
            gi|355478127|gb|AES59330.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 336

 Score =  369 bits (947), Expect = 1e-99
 Identities = 195/303 (64%), Positives = 234/303 (77%)
 Frame = +2

Query: 344  GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523
            GEF+ + S S    +  ASE+ DDLI QLVS LHS SI+             KNK ENR+
Sbjct: 28   GEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRLLAKNKPENRI 87

Query: 524  KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703
            KIA+AGA++P             EYGVTAILNLSLCDENKEL+   GAIKPLV+AL +G+
Sbjct: 88   KIAKAGAIKPLISLVTSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNSGT 147

Query: 704  TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883
            +T+KEN+ACAL RLSQ+EENK  IGRSGAIPLLVNLL +G  RGKKD+STALY+LCS+KE
Sbjct: 148  STAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCSVKE 207

Query: 884  NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063
            NK+RA++AGIMK L++LMADFES MVDK+A VL++LVS  E K ALV E G+PVLVEIVE
Sbjct: 208  NKMRAVKAGIMKVLVELMADFESNMVDKSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVE 267

Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243
            VGS RQKEIA  ILLQICE+++   S+VA EGAIPPL++L +SGT+RAK+KAE LI LLR
Sbjct: 268  VGSQRQKEIAAVILLQICEDSVAVRSMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLR 327

Query: 1244 QPR 1252
            QPR
Sbjct: 328  QPR 330


>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  366 bits (940), Expect = 9e-99
 Identities = 196/310 (63%), Positives = 235/310 (75%)
 Frame = +2

Query: 344  GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523
            GEF  + S S   LI  AS++ D+LI  LV  L S SI+             KNK ENRL
Sbjct: 37   GEFPTASSQSRRLLIACASDNSDELIRHLVLDLESCSIEEQKQAAMEIRLLAKNKPENRL 96

Query: 524  KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703
            KIA+AGAVRP             EYGVTAILNLSLCDENKEL+   GAIKPLV+AL +G+
Sbjct: 97   KIAKAGAVRPLISLISCTDPQLQEYGVTAILNLSLCDENKELIAASGAIKPLVRALMSGT 156

Query: 704  TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883
             T+KEN+ACAL RLSQ+EENKI IGRSGAIPLLVNLL+NG  RGKKD+STALYSLCS+KE
Sbjct: 157  PTAKENAACALLRLSQMEENKIAIGRSGAIPLLVNLLENGGFRGKKDASTALYSLCSVKE 216

Query: 884  NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063
            NKIRA++AGIM+PL++LMADF S MVDK+A VL++LVS  E + ALV E GIPVLVE+VE
Sbjct: 217  NKIRAVKAGIMRPLVELMADFGSNMVDKSAFVLSVLVSMSEARSALVEEGGIPVLVELVE 276

Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243
             G+ RQKEIA  ILLQICE++++Y ++VA EGAIPPL++L +SGT+RAK+KAE LI LLR
Sbjct: 277  DGTQRQKEIAAVILLQICEDSVLYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLR 336

Query: 1244 QPRPNTARAS 1273
            QPR     A+
Sbjct: 337  QPRSGNYAAT 346



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
 Frame = +2

Query: 800  LVNLLQNGSSRGKKDSSTALYSLCSMK-ENKIRAIEAGIMKPLLDLMADFESGMVDKAAS 976
            LV  L++ S   +K ++  +  L   K EN+++  +AG ++PL+ L++  +  + +   +
Sbjct: 65   LVLDLESCSIEEQKQAAMEIRLLAKNKPENRLKIAKAGAVRPLISLISCTDPQLQEYGVT 124

Query: 977  VLNILVSFKEGKEALVNEDGIPVLVEIVEVGSNRQKEIATAILLQIC--EENLVYCSIVA 1150
             +  L    E KE +     I  LV  +  G+   KE A   LL++   EEN +    + 
Sbjct: 125  AILNLSLCDENKELIAASGAIKPLVRALMSGTPTAKENAACALLRLSQMEENKI---AIG 181

Query: 1151 SEGAIPPLISLLESGTSRAKEKAESLIGLLRQPRPNTARASK 1276
              GAIP L++LLE+G  R K+ A + +  L   + N  RA K
Sbjct: 182  RSGAIPLLVNLLENGGFRGKKDASTALYSLCSVKENKIRAVK 223


>ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 352

 Score =  363 bits (933), Expect = 6e-98
 Identities = 189/309 (61%), Positives = 237/309 (76%)
 Frame = +2

Query: 344  GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523
            GEF+ + S +   LI  A+E+ DDLI QLV+ LHS+SID             KNK ENR+
Sbjct: 36   GEFATASSQTRRFLIACATENSDDLIRQLVADLHSSSIDDQKQAAMEIRLLAKNKPENRI 95

Query: 524  KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703
            KIA+AGA++P             EYGVTAILNLSLCDENKE++   GAIKPLV+AL +G+
Sbjct: 96   KIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDENKEVIASSGAIKPLVRALNSGT 155

Query: 704  TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883
             T+KEN+ACAL RLSQ+EENK  IGRSGAIPLLV+LL++G  R KKD+STALYSLC++KE
Sbjct: 156  ATAKENAACALLRLSQVEENKAAIGRSGAIPLLVSLLESGGFRAKKDASTALYSLCTVKE 215

Query: 884  NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063
            NKIRA++AGIMK L++LMADFES MVDK+A V+++LV+  E + ALV E G+PVLVEIVE
Sbjct: 216  NKIRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVAVPEARVALVEEGGVPVLVEIVE 275

Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243
            VG+ RQKEIA  ILLQ+CE+++ Y ++VA EGAIPPL++L +SGT+RAK+KAE LI LLR
Sbjct: 276  VGTQRQKEIAVVILLQVCEDSVTYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLR 335

Query: 1244 QPRPNTARA 1270
            QPR     A
Sbjct: 336  QPRSGNGAA 344



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
 Frame = +2

Query: 800  LVNLLQNGSSRGKKDSSTALYSLCSMK-ENKIRAIEAGIMKPLLDLMADFESGMVDKAAS 976
            LV  L + S   +K ++  +  L   K EN+I+  +AG +KPL+ L++  +  + +   +
Sbjct: 64   LVADLHSSSIDDQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLISSPDLQLQEYGVT 123

Query: 977  VLNILVSFKEGKEALVNEDGIPVLVEIVEVGSNRQKEIATAILLQIC--EENLVYCSIVA 1150
             +  L    E KE + +   I  LV  +  G+   KE A   LL++   EEN    + + 
Sbjct: 124  AILNLSLCDENKEVIASSGAIKPLVRALNSGTATAKENAACALLRLSQVEENK---AAIG 180

Query: 1151 SEGAIPPLISLLESGTSRAKEKAESLIGLLRQPRPNTARASK 1276
              GAIP L+SLLESG  RAK+ A + +  L   + N  RA K
Sbjct: 181  RSGAIPLLVSLLESGGFRAKKDASTALYSLCTVKENKIRAVK 222


>emb|CBI19404.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  363 bits (932), Expect = 8e-98
 Identities = 198/309 (64%), Positives = 233/309 (75%)
 Frame = +2

Query: 344  GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523
            GEF  + S     L+  A+++ DDLI QLVS L+S SID             KNK ENRL
Sbjct: 73   GEFPTTSSQGRRLLLACAADNCDDLIRQLVSDLNSCSIDEQKQAAMEIRLLAKNKPENRL 132

Query: 524  KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703
            KIA AGA++P             E GVTAILNLSLCDENKEL+   GAIKPLV+AL+TG+
Sbjct: 133  KIAGAGAIKPLISLISSSDAQLQENGVTAILNLSLCDENKELIASSGAIKPLVRALKTGT 192

Query: 704  TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883
            +T+KEN+ACAL RLSQIEENKI IG +GAIPLLVNLL  GS RGKKD+ST LYSLCS+KE
Sbjct: 193  STAKENAACALLRLSQIEENKIVIGMAGAIPLLVNLLGYGSFRGKKDASTTLYSLCSVKE 252

Query: 884  NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063
            NKIRAI+AGIMKPL++LMADF S MVDKAA VL+ LVS  EGK +LV EDGIPVLVEI+E
Sbjct: 253  NKIRAIQAGIMKPLVELMADFGSNMVDKAAYVLSQLVSLPEGKTSLVEEDGIPVLVEILE 312

Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243
             GS RQKEIA AILLQICE++L Y ++VA EGAIPPL++L +S  +R+K+KAE+LI LLR
Sbjct: 313  DGSQRQKEIAVAILLQICEDSLAYRNMVAREGAIPPLVALSQSSANRSKQKAEALIDLLR 372

Query: 1244 QPRPNTARA 1270
            QPR     A
Sbjct: 373  QPRSGNVAA 381