BLASTX nr result
ID: Coptis24_contig00026246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026246 (1750 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus... 373 e-100 ref|XP_003589079.1| U-box domain-containing protein [Medicago tr... 369 1e-99 ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4... 366 9e-99 ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4... 363 6e-98 emb|CBI19404.3| unnamed protein product [Vitis vinifera] 363 8e-98 >ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis] gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis] Length = 352 Score = 373 bits (957), Expect = e-100 Identities = 197/309 (63%), Positives = 237/309 (76%) Frame = +2 Query: 344 GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523 GEF + S S LI A+E+ DD I QLV L S SID KNK ENRL Sbjct: 37 GEFPTASSESRRLLIACAAENSDDFIRQLVLDLESCSIDEQKQAAMEIRLLAKNKPENRL 96 Query: 524 KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703 KI +AGA++P EYGVTAILNLSLCDENKE++ GAIKPLV+AL+TG+ Sbjct: 97 KIVKAGALKPLISLISCSDSQLQEYGVTAILNLSLCDENKEVIASSGAIKPLVRALKTGT 156 Query: 704 TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883 +T+KEN+ACAL RLSQ+EENK+ IGRSG+IPLLVNLL+ G RGKKD++TALYSLCS+KE Sbjct: 157 STAKENAACALLRLSQVEENKVAIGRSGSIPLLVNLLETGGFRGKKDAATALYSLCSVKE 216 Query: 884 NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063 NK+RA++AGIMKPL++LMADFES MVDK+A VL++LVS E + ALV E GIPVLVEI+E Sbjct: 217 NKMRAVQAGIMKPLVELMADFESNMVDKSAFVLSLLVSVTEARTALVEEGGIPVLVEIIE 276 Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243 VGS RQKEIA AILLQICE+NL+ ++V EGAIPPLI+L +SGT+RAK+KAE+LI LLR Sbjct: 277 VGSQRQKEIAVAILLQICEDNLMRRAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLR 336 Query: 1244 QPRPNTARA 1270 QPR A A Sbjct: 337 QPRSGNAAA 345 >ref|XP_003589079.1| U-box domain-containing protein [Medicago truncatula] gi|355478127|gb|AES59330.1| U-box domain-containing protein [Medicago truncatula] Length = 336 Score = 369 bits (947), Expect = 1e-99 Identities = 195/303 (64%), Positives = 234/303 (77%) Frame = +2 Query: 344 GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523 GEF+ + S S + ASE+ DDLI QLVS LHS SI+ KNK ENR+ Sbjct: 28 GEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRLLAKNKPENRI 87 Query: 524 KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703 KIA+AGA++P EYGVTAILNLSLCDENKEL+ GAIKPLV+AL +G+ Sbjct: 88 KIAKAGAIKPLISLVTSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNSGT 147 Query: 704 TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883 +T+KEN+ACAL RLSQ+EENK IGRSGAIPLLVNLL +G RGKKD+STALY+LCS+KE Sbjct: 148 STAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCSVKE 207 Query: 884 NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063 NK+RA++AGIMK L++LMADFES MVDK+A VL++LVS E K ALV E G+PVLVEIVE Sbjct: 208 NKMRAVKAGIMKVLVELMADFESNMVDKSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVE 267 Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243 VGS RQKEIA ILLQICE+++ S+VA EGAIPPL++L +SGT+RAK+KAE LI LLR Sbjct: 268 VGSQRQKEIAAVILLQICEDSVAVRSMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLR 327 Query: 1244 QPR 1252 QPR Sbjct: 328 QPR 330 >ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus] gi|449482708|ref|XP_004156379.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus] Length = 352 Score = 366 bits (940), Expect = 9e-99 Identities = 196/310 (63%), Positives = 235/310 (75%) Frame = +2 Query: 344 GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523 GEF + S S LI AS++ D+LI LV L S SI+ KNK ENRL Sbjct: 37 GEFPTASSQSRRLLIACASDNSDELIRHLVLDLESCSIEEQKQAAMEIRLLAKNKPENRL 96 Query: 524 KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703 KIA+AGAVRP EYGVTAILNLSLCDENKEL+ GAIKPLV+AL +G+ Sbjct: 97 KIAKAGAVRPLISLISCTDPQLQEYGVTAILNLSLCDENKELIAASGAIKPLVRALMSGT 156 Query: 704 TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883 T+KEN+ACAL RLSQ+EENKI IGRSGAIPLLVNLL+NG RGKKD+STALYSLCS+KE Sbjct: 157 PTAKENAACALLRLSQMEENKIAIGRSGAIPLLVNLLENGGFRGKKDASTALYSLCSVKE 216 Query: 884 NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063 NKIRA++AGIM+PL++LMADF S MVDK+A VL++LVS E + ALV E GIPVLVE+VE Sbjct: 217 NKIRAVKAGIMRPLVELMADFGSNMVDKSAFVLSVLVSMSEARSALVEEGGIPVLVELVE 276 Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243 G+ RQKEIA ILLQICE++++Y ++VA EGAIPPL++L +SGT+RAK+KAE LI LLR Sbjct: 277 DGTQRQKEIAAVILLQICEDSVLYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLR 336 Query: 1244 QPRPNTARAS 1273 QPR A+ Sbjct: 337 QPRSGNYAAT 346 Score = 58.5 bits (140), Expect = 5e-06 Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 3/162 (1%) Frame = +2 Query: 800 LVNLLQNGSSRGKKDSSTALYSLCSMK-ENKIRAIEAGIMKPLLDLMADFESGMVDKAAS 976 LV L++ S +K ++ + L K EN+++ +AG ++PL+ L++ + + + + Sbjct: 65 LVLDLESCSIEEQKQAAMEIRLLAKNKPENRLKIAKAGAVRPLISLISCTDPQLQEYGVT 124 Query: 977 VLNILVSFKEGKEALVNEDGIPVLVEIVEVGSNRQKEIATAILLQIC--EENLVYCSIVA 1150 + L E KE + I LV + G+ KE A LL++ EEN + + Sbjct: 125 AILNLSLCDENKELIAASGAIKPLVRALMSGTPTAKENAACALLRLSQMEENKI---AIG 181 Query: 1151 SEGAIPPLISLLESGTSRAKEKAESLIGLLRQPRPNTARASK 1276 GAIP L++LLE+G R K+ A + + L + N RA K Sbjct: 182 RSGAIPLLVNLLENGGFRGKKDASTALYSLCSVKENKIRAVK 223 >ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max] Length = 352 Score = 363 bits (933), Expect = 6e-98 Identities = 189/309 (61%), Positives = 237/309 (76%) Frame = +2 Query: 344 GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523 GEF+ + S + LI A+E+ DDLI QLV+ LHS+SID KNK ENR+ Sbjct: 36 GEFATASSQTRRFLIACATENSDDLIRQLVADLHSSSIDDQKQAAMEIRLLAKNKPENRI 95 Query: 524 KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703 KIA+AGA++P EYGVTAILNLSLCDENKE++ GAIKPLV+AL +G+ Sbjct: 96 KIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDENKEVIASSGAIKPLVRALNSGT 155 Query: 704 TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883 T+KEN+ACAL RLSQ+EENK IGRSGAIPLLV+LL++G R KKD+STALYSLC++KE Sbjct: 156 ATAKENAACALLRLSQVEENKAAIGRSGAIPLLVSLLESGGFRAKKDASTALYSLCTVKE 215 Query: 884 NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063 NKIRA++AGIMK L++LMADFES MVDK+A V+++LV+ E + ALV E G+PVLVEIVE Sbjct: 216 NKIRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVAVPEARVALVEEGGVPVLVEIVE 275 Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243 VG+ RQKEIA ILLQ+CE+++ Y ++VA EGAIPPL++L +SGT+RAK+KAE LI LLR Sbjct: 276 VGTQRQKEIAVVILLQVCEDSVTYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLR 335 Query: 1244 QPRPNTARA 1270 QPR A Sbjct: 336 QPRSGNGAA 344 Score = 65.9 bits (159), Expect = 3e-08 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 3/162 (1%) Frame = +2 Query: 800 LVNLLQNGSSRGKKDSSTALYSLCSMK-ENKIRAIEAGIMKPLLDLMADFESGMVDKAAS 976 LV L + S +K ++ + L K EN+I+ +AG +KPL+ L++ + + + + Sbjct: 64 LVADLHSSSIDDQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLISSPDLQLQEYGVT 123 Query: 977 VLNILVSFKEGKEALVNEDGIPVLVEIVEVGSNRQKEIATAILLQIC--EENLVYCSIVA 1150 + L E KE + + I LV + G+ KE A LL++ EEN + + Sbjct: 124 AILNLSLCDENKEVIASSGAIKPLVRALNSGTATAKENAACALLRLSQVEENK---AAIG 180 Query: 1151 SEGAIPPLISLLESGTSRAKEKAESLIGLLRQPRPNTARASK 1276 GAIP L+SLLESG RAK+ A + + L + N RA K Sbjct: 181 RSGAIPLLVSLLESGGFRAKKDASTALYSLCTVKENKIRAVK 222 >emb|CBI19404.3| unnamed protein product [Vitis vinifera] Length = 388 Score = 363 bits (932), Expect = 8e-98 Identities = 198/309 (64%), Positives = 233/309 (75%) Frame = +2 Query: 344 GEFSVSLSPSSCCLIGSASESPDDLIHQLVSSLHSTSIDVXXXXXXXXXXXXKNKQENRL 523 GEF + S L+ A+++ DDLI QLVS L+S SID KNK ENRL Sbjct: 73 GEFPTTSSQGRRLLLACAADNCDDLIRQLVSDLNSCSIDEQKQAAMEIRLLAKNKPENRL 132 Query: 524 KIARAGAVRPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELVTKLGAIKPLVKALRTGS 703 KIA AGA++P E GVTAILNLSLCDENKEL+ GAIKPLV+AL+TG+ Sbjct: 133 KIAGAGAIKPLISLISSSDAQLQENGVTAILNLSLCDENKELIASSGAIKPLVRALKTGT 192 Query: 704 TTSKENSACALFRLSQIEENKIRIGRSGAIPLLVNLLQNGSSRGKKDSSTALYSLCSMKE 883 +T+KEN+ACAL RLSQIEENKI IG +GAIPLLVNLL GS RGKKD+ST LYSLCS+KE Sbjct: 193 STAKENAACALLRLSQIEENKIVIGMAGAIPLLVNLLGYGSFRGKKDASTTLYSLCSVKE 252 Query: 884 NKIRAIEAGIMKPLLDLMADFESGMVDKAASVLNILVSFKEGKEALVNEDGIPVLVEIVE 1063 NKIRAI+AGIMKPL++LMADF S MVDKAA VL+ LVS EGK +LV EDGIPVLVEI+E Sbjct: 253 NKIRAIQAGIMKPLVELMADFGSNMVDKAAYVLSQLVSLPEGKTSLVEEDGIPVLVEILE 312 Query: 1064 VGSNRQKEIATAILLQICEENLVYCSIVASEGAIPPLISLLESGTSRAKEKAESLIGLLR 1243 GS RQKEIA AILLQICE++L Y ++VA EGAIPPL++L +S +R+K+KAE+LI LLR Sbjct: 313 DGSQRQKEIAVAILLQICEDSLAYRNMVAREGAIPPLVALSQSSANRSKQKAEALIDLLR 372 Query: 1244 QPRPNTARA 1270 QPR A Sbjct: 373 QPRSGNVAA 381