BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026243
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   184   2e-44
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   182   5e-44
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   181   1e-43
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   181   1e-43
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...   180   2e-43

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  184 bits (467), Expect = 2e-44
 Identities = 88/222 (39%), Positives = 135/222 (60%)
 Frame = -1

Query: 715  KIRKRSPSISHLLYADDLIVFSKASFEEASNMKELLEKYCNATGQEVNWHKSSAYFSQNV 536
            K  +  P ISHLL+ADD ++F++A+ +E   + ++L KY  A+GQ++N+ KS   FS+ V
Sbjct: 675  KASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGV 734

Query: 535  HHRHQKILIKRWRVRKFTEKEKYLGVPILLSKKKGEDFEYLVDILQKKVTGWKSKILSQA 356
                ++ LI    +R+    +KYLG+P L  + K   F  L+D + KK+ GWK K+LS+A
Sbjct: 735  SCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRA 794

Query: 355  SRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKSNAWHTLSWEKLCRA 176
             +  L+KAV QA+P Y MGVY LPV+  +++      FWW G       H LSWEK+C+ 
Sbjct: 795  GKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKP 854

Query: 175  KINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY 50
            K  GG+GF+     N A+L K  WR++ + +S+ +R  S+ Y
Sbjct: 855  KCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKY 896


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  182 bits (463), Expect = 5e-44
 Identities = 85/215 (39%), Positives = 133/215 (61%)
 Frame = -1

Query: 691  ISHLLYADDLIVFSKASFEEASNMKELLEKYCNATGQEVNWHKSSAYFSQNVHHRHQKIL 512
            +SH+ +ADDLI+F++AS  +   ++ +LE++C A+GQ+V+  KS  +FS NV    ++++
Sbjct: 539  LSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLI 598

Query: 511  IKRWRVRKFTEKEKYLGVPILLSKKKGEDFEYLVDILQKKVTGWKSKILSQASRTTLVKA 332
             +   +    E  KYLG+PIL  +   E F  +++ +  ++ GWK + LS A R TL KA
Sbjct: 599  SEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKA 658

Query: 331  VGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKSNAWHTLSWEKLCRAKINGGLGF 152
            V  ++P++ M    LPVST + LD+ +R F W    +    H LSW K+C+ K  GG+G 
Sbjct: 659  VLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGL 718

Query: 151  RRARDMNTAMLTKHSWRMIQDADSIWARTFSSLYK 47
            R ARDMN A++ K  WR++QD +S+WAR     YK
Sbjct: 719  RSARDMNKALVAKVGWRLLQDKESLWARVVRKKYK 753


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  181 bits (460), Expect = 1e-43
 Identities = 86/230 (37%), Positives = 140/230 (60%), Gaps = 2/230 (0%)
 Frame = -1

Query: 718  IKIRKRSPSISHLLYADDLIVFSKASFEEASNMKELLEKYCNATGQEVNWHKSSAYFSQN 539
            I+I + +PS+SHLL+ADD ++  +A+  EA  ++ +L+ Y   +GQ +N  KS+  FS N
Sbjct: 923  IRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 982

Query: 538  VHHRHQKILIKRWRVRKFTEKEKYLGVPILLSKKKGEDFEYLVDILQKKVTGWKSKILSQ 359
                 ++ ++    +++ T  E+YLG+P+ + + + + F YL + + +++ GWK K+LS+
Sbjct: 983  TSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSR 1042

Query: 358  ASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKSNAWHTLSWEKLCR 179
            A +  L+KAV QA+P +AMG + L    C+++ ++   +WW+  +K N  H LSW KL  
Sbjct: 1043 AGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTL 1102

Query: 178  AKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY--KWDCF 35
             K  GGLGFR     N AML K  WR+IQD DS+ +R   + Y    DCF
Sbjct: 1103 PKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCF 1152


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  181 bits (459), Expect = 1e-43
 Identities = 87/230 (37%), Positives = 139/230 (60%), Gaps = 2/230 (0%)
 Frame = -1

Query: 718  IKIRKRSPSISHLLYADDLIVFSKASFEEASNMKELLEKYCNATGQEVNWHKSSAYFSQN 539
            I+I + +PS+SHLL+ADD ++  +A+  EA  ++ +L+ Y   +GQ +N  KS+  FS N
Sbjct: 896  IRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 955

Query: 538  VHHRHQKILIKRWRVRKFTEKEKYLGVPILLSKKKGEDFEYLVDILQKKVTGWKSKILSQ 359
                 +  ++    +++ T  EKYLG+P+ + + + + F YL + + +++ GWK K+LS+
Sbjct: 956  TSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSR 1015

Query: 358  ASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKSNAWHTLSWEKLCR 179
            A +  L+KAV QA+P +AMG + L    C+++ ++   +WW+  +K N  H LSW KL  
Sbjct: 1016 AGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTL 1075

Query: 178  AKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY--KWDCF 35
             K  GGLGFR     N AML K  WR+IQD DS+ +R   + Y    DCF
Sbjct: 1076 PKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCF 1125


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score =  180 bits (457), Expect = 2e-43
 Identities = 84/224 (37%), Positives = 139/224 (62%)
 Frame = -1

Query: 718 IKIRKRSPSISHLLYADDLIVFSKASFEEASNMKELLEKYCNATGQEVNWHKSSAYFSQN 539
           I + +  P +SH+ +ADDLI+F++AS  +   ++ +LE++C A+GQ+V+  KS  +FS+N
Sbjct: 192 ISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSEN 251

Query: 538 VHHRHQKILIKRWRVRKFTEKEKYLGVPILLSKKKGEDFEYLVDILQKKVTGWKSKILSQ 359
           V     K++     +    E  KYLG+P+L  +   + F  +++ L  ++ GWK + LS 
Sbjct: 252 VSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSL 311

Query: 358 ASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKSNAWHTLSWEKLCR 179
           A R TL KAV  ++P++ M   +LP ST + LD+++R+F W         H +SW+++C+
Sbjct: 312 AGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCK 371

Query: 178 AKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLYK 47
            +  GGLG R+A+DMN A+L+K  WR+IQD  S+WAR     Y+
Sbjct: 372 PRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYR 415