BLASTX nr result

ID: Coptis24_contig00026232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026232
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30366.3| unnamed protein product [Vitis vinifera]              416   e-114
ref|XP_002275518.1| PREDICTED: UPF0554 protein C2orf43 homolog [...   416   e-114
ref|NP_001239760.1| uncharacterized protein LOC100790552 [Glycin...   408   e-111
gb|AFK48327.1| unknown [Lotus japonicus]                              406   e-111
ref|XP_002884854.1| hypothetical protein ARALYDRAFT_897364 [Arab...   397   e-108

>emb|CBI30366.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  416 bits (1070), Expect = e-114
 Identities = 193/295 (65%), Positives = 240/295 (81%)
 Frame = +3

Query: 24  NFRLCNVSGFTTELLELKAENPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTAIG 203
           NFRLC+VSG+TTELL+L AE P  HVL IPGNPG+VSFYK+FVE +YE+L G  SVTAIG
Sbjct: 68  NFRLCSVSGYTTELLDLHAEEPKLHVLFIPGNPGIVSFYKDFVESLYELLGGSVSVTAIG 127

Query: 204 HIGHTRKNWECRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRSPE 383
           H+ HT+KNWE  RLF+LQDQIDHK+D+I+HE +N + P+LLVGHSIG+YIS+E+ RRSP+
Sbjct: 128 HVSHTKKNWEHGRLFTLQDQIDHKMDFIQHELKNIDAPILLVGHSIGAYISMEMFRRSPD 187

Query: 384 QVKYIIGLYPFLRLNKESLLQKLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKRSI 563
           +V Y +GLYPFL LN ES  Q  IG+ +AS ++   LSS+VA LGL P   S  +V  S+
Sbjct: 188 KVIYYVGLYPFLALNSESRKQTTIGRISASPILCAALSSIVAFLGLLPRWASGFIVSNSL 247

Query: 564 GKSWSATAVEALCSHLLQYHTLRNVLFLTMTEFEKLAEVPDWMFIRGNQDKIAFLFGIDD 743
           GKSWS+TAVEALCSHLL+YHT+RNVL++ MTEF +L+E  DW+F+R  + +IAFLFG+DD
Sbjct: 248 GKSWSSTAVEALCSHLLKYHTIRNVLYMAMTEFTRLSEPLDWVFMREKRSQIAFLFGVDD 307

Query: 744 HWGPLAMFEQISKQVPEVVLTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQFKS 908
           HWGPL M E+ISKQ P+V L+IEREGH+H FCCTEAGS+WVA HV +LIK Q  S
Sbjct: 308 HWGPLQMLEEISKQAPDVALSIEREGHSHAFCCTEAGSLWVAQHVANLIKNQISS 362


>ref|XP_002275518.1| PREDICTED: UPF0554 protein C2orf43 homolog [Vitis vinifera]
          Length = 311

 Score =  416 bits (1070), Expect = e-114
 Identities = 193/295 (65%), Positives = 240/295 (81%)
 Frame = +3

Query: 24  NFRLCNVSGFTTELLELKAENPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTAIG 203
           NFRLC+VSG+TTELL+L AE P  HVL IPGNPG+VSFYK+FVE +YE+L G  SVTAIG
Sbjct: 15  NFRLCSVSGYTTELLDLHAEEPKLHVLFIPGNPGIVSFYKDFVESLYELLGGSVSVTAIG 74

Query: 204 HIGHTRKNWECRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRSPE 383
           H+ HT+KNWE  RLF+LQDQIDHK+D+I+HE +N + P+LLVGHSIG+YIS+E+ RRSP+
Sbjct: 75  HVSHTKKNWEHGRLFTLQDQIDHKMDFIQHELKNIDAPILLVGHSIGAYISMEMFRRSPD 134

Query: 384 QVKYIIGLYPFLRLNKESLLQKLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKRSI 563
           +V Y +GLYPFL LN ES  Q  IG+ +AS ++   LSS+VA LGL P   S  +V  S+
Sbjct: 135 KVIYYVGLYPFLALNSESRKQTTIGRISASPILCAALSSIVAFLGLLPRWASGFIVSNSL 194

Query: 564 GKSWSATAVEALCSHLLQYHTLRNVLFLTMTEFEKLAEVPDWMFIRGNQDKIAFLFGIDD 743
           GKSWS+TAVEALCSHLL+YHT+RNVL++ MTEF +L+E  DW+F+R  + +IAFLFG+DD
Sbjct: 195 GKSWSSTAVEALCSHLLKYHTIRNVLYMAMTEFTRLSEPLDWVFMREKRSQIAFLFGVDD 254

Query: 744 HWGPLAMFEQISKQVPEVVLTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQFKS 908
           HWGPL M E+ISKQ P+V L+IEREGH+H FCCTEAGS+WVA HV +LIK Q  S
Sbjct: 255 HWGPLQMLEEISKQAPDVALSIEREGHSHAFCCTEAGSLWVAQHVANLIKNQISS 309


>ref|NP_001239760.1| uncharacterized protein LOC100790552 [Glycine max]
           gi|255634927|gb|ACU17822.1| unknown [Glycine max]
          Length = 349

 Score =  408 bits (1049), Expect = e-111
 Identities = 190/294 (64%), Positives = 239/294 (81%)
 Frame = +3

Query: 18  KQNFRLCNVSGFTTELLELKAENPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTA 197
           + NFRLCNVS +T+E+LE++++ P+ HVL +PGNPGV+ FYK+FVE +YE+LEG ASVTA
Sbjct: 50  RANFRLCNVSCYTSEVLEIQSDAPTLHVLFVPGNPGVILFYKDFVEFLYELLEGTASVTA 109

Query: 198 IGHIGHTRKNWECRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRS 377
           IGH+ H+RKN E  R+FSLQ+QIDHK+D+I+ E +N EIP+LLVGHSIGSYIS+E+ ++S
Sbjct: 110 IGHVSHSRKNLEHGRMFSLQEQIDHKIDFIREELENVEIPILLVGHSIGSYISIEMFKKS 169

Query: 378 PEQVKYIIGLYPFLRLNKESLLQKLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKR 557
           PE+VKY IGLYPFL LN  S  Q +IGK A SQV++  LS L A LGL P    R LV++
Sbjct: 170 PEKVKYCIGLYPFLTLNPHSTTQLVIGKIAKSQVLAAALSYLTASLGLLPVQALRFLVRK 229

Query: 558 SIGKSWSATAVEALCSHLLQYHTLRNVLFLTMTEFEKLAEVPDWMFIRGNQDKIAFLFGI 737
           S+GKSWSA AVEA CSHL QYHT+RNVL++ MTEF KL+E PDW+F+R  + ++AFLFG+
Sbjct: 230 SLGKSWSANAVEAACSHLSQYHTMRNVLYMAMTEFRKLSEAPDWIFMRERKAQLAFLFGV 289

Query: 738 DDHWGPLAMFEQISKQVPEVVLTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQ 899
           DDHWGPL + E+ISK VP +   IERE HTHGFCCTEAGS+WVA HVV+LIK Q
Sbjct: 290 DDHWGPLHLLEEISKHVPGMATYIERENHTHGFCCTEAGSLWVAQHVVNLIKNQ 343


>gb|AFK48327.1| unknown [Lotus japonicus]
          Length = 313

 Score =  406 bits (1043), Expect = e-111
 Identities = 190/295 (64%), Positives = 236/295 (80%)
 Frame = +3

Query: 18  KQNFRLCNVSGFTTELLELKAENPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTA 197
           + NFRLCNVSG+T+E+LE++A+ PS HVL IPGNPGV+ FYKEFVE +YE+L G ASVTA
Sbjct: 14  RANFRLCNVSGYTSEILEIQADTPSLHVLFIPGNPGVILFYKEFVEFLYELLAGTASVTA 73

Query: 198 IGHIGHTRKNWECRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRS 377
           IGH+ H+RK+WE  RL SLQ+QIDHK+D+I+ E QN EIP+LLVGHSIGSYIS+E+ ++S
Sbjct: 74  IGHVSHSRKDWEQGRLLSLQEQIDHKIDFIREELQNIEIPILLVGHSIGSYISIEIFKKS 133

Query: 378 PEQVKYIIGLYPFLRLNKESLLQKLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKR 557
           P++VKY +GLYPFL LN  S  Q +I K A S  ++  LS LVA LGL P    R +V++
Sbjct: 134 PQKVKYCVGLYPFLTLNPHSTTQLVIAKIAKSHFVAAALSYLVASLGLLPVQALRFIVRK 193

Query: 558 SIGKSWSATAVEALCSHLLQYHTLRNVLFLTMTEFEKLAEVPDWMFIRGNQDKIAFLFGI 737
           S+GKSWSA+AVEA CSHL QYHT+RNVL++ MTEFEKL+E PDW FIR  + + AFLFG 
Sbjct: 194 SLGKSWSASAVEAACSHLSQYHTMRNVLYMAMTEFEKLSETPDWAFIRERKAQFAFLFGD 253

Query: 738 DDHWGPLAMFEQISKQVPEVVLTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQF 902
           DDHWGPL + E+ISK VP + ++IERE HTHGF CTEAGS+WVA HV  LIK Q+
Sbjct: 254 DDHWGPLHLSEEISKLVPGIPISIERENHTHGFSCTEAGSLWVAQHVADLIKNQW 308


>ref|XP_002884854.1| hypothetical protein ARALYDRAFT_897364 [Arabidopsis lyrata subsp.
           lyrata] gi|297330694|gb|EFH61113.1| hypothetical protein
           ARALYDRAFT_897364 [Arabidopsis lyrata subsp. lyrata]
          Length = 312

 Score =  397 bits (1019), Expect = e-108
 Identities = 188/291 (64%), Positives = 230/291 (79%)
 Frame = +3

Query: 30  RLCNVSGFTTELLELKAENPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTAIGHI 209
           RLC VSG  TE++E++AENP+F+VL IPGNPGVVSFYKEF+E +YE L+G ASV AIG I
Sbjct: 18  RLCRVSGLMTEIMEIQAENPTFYVLFIPGNPGVVSFYKEFLESLYEFLDGNASVIAIGQI 77

Query: 210 GHTRKNWECRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRSPEQV 389
            HT K+WE  RLFS Q+QIDHK+D+I+ E ++ ++P++LVGHSIGSYISLE+LR+  E+V
Sbjct: 78  SHTSKDWESGRLFSFQEQIDHKIDFIRQELESVKLPIILVGHSIGSYISLEMLRKFSEKV 137

Query: 390 KYIIGLYPFLRLNKESLLQKLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKRSIGK 569
            Y IGLYPFL LN++S  Q LIGK AAS ++S   S L+A L L P S +R LV +SIG 
Sbjct: 138 VYCIGLYPFLTLNQQSTKQSLIGKLAASSILSATASFLIASLRLLPMSAARLLVSKSIGA 197

Query: 570 SWSATAVEALCSHLLQYHTLRNVLFLTMTEFEKLAEVPDWMFIRGNQDKIAFLFGIDDHW 749
           SWS TAV+A C+HL QYHT+RNVLF+  +EF +LA  PDW F+R NQ K+AFLFGIDDHW
Sbjct: 198 SWSDTAVQATCTHLRQYHTMRNVLFMAKSEFRELAAEPDWDFMRENQSKLAFLFGIDDHW 257

Query: 750 GPLAMFEQISKQVPEVVLTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQF 902
           GPL +FE+ISKQ P   L IEREGHTHGFCCT AGS WVA HV +LIK +F
Sbjct: 258 GPLQLFEEISKQAPGTSLAIEREGHTHGFCCTVAGSAWVAQHVATLIKNRF 308


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