BLASTX nr result

ID: Coptis24_contig00026227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026227
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic su...    98   6e-37
emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]    99   8e-37
emb|CBI26389.3| unnamed protein product [Vitis vinifera]               97   2e-36
ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G...    97   2e-36
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...    92   2e-36

>ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like, partial [Vitis vinifera]
          Length = 550

 Score = 97.8 bits (242), Expect(2) = 6e-37
 Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
 Frame = -3

Query: 497 MEARLPFHVSHVKQPRATINRIHTVFLIVAILALLYYRFSVIFKSNGKIS----IFPWLF 330
           ME  LP H+ HV++  A INR H +    A++AL+YYR S + ++   IS    I PWL 
Sbjct: 1   MEGSLPRHLCHVQKSSAIINRFHALIHSTALIALIYYRASFLLQNTDTISGHTPIIPWLL 60

Query: 329 ITVSELLLWLFWFLGQAYRWKPITRTVFPERLPGDEKL 216
           +   EL+L   W L QA+RW+P+TR+VFPERLP D++L
Sbjct: 61  VFAGELVLSFIWLLEQAFRWRPVTRSVFPERLPEDKQL 98



 Score = 82.4 bits (202), Expect(2) = 6e-37
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = -2

Query: 225 RKATPIDVFIFTCDPTREPTIGVMNTVISAMCLDYPTDKLSVYLSDDAGAPITLHAIKEA 46
           ++  PIDVFI T DP +EPT+ VMNTVISAM LDY  +KL VY+SDD G+ +TL+ +KEA
Sbjct: 96  KQLPPIDVFICTVDPKKEPTLEVMNTVISAMALDYRPEKLHVYVSDDGGSSLTLYGMKEA 155

Query: 45  YSFLAS 28
           + F  S
Sbjct: 156 WEFARS 161


>emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]
          Length = 643

 Score = 99.0 bits (245), Expect(2) = 8e-37
 Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
 Frame = -3

Query: 497 MEARLPFHVSHVKQPRATINRIHTVFLIVAILALLYYRFSVIFKSN----GKISIFPWLF 330
           ME  LP H+ HV++  A INR H +    A++AL+YYR S + ++N    G   I PWL 
Sbjct: 1   MEGSLPRHLCHVQKSSAIINRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLL 60

Query: 329 ITVSELLLWLFWFLGQAYRWKPITRTVFPERLPGDEKL 216
           +   EL+L   W L QA+RW+P+TR VFPERLP D++L
Sbjct: 61  VFAGELVLSFIWLLDQAFRWRPVTRAVFPERLPEDKQL 98



 Score = 80.9 bits (198), Expect(2) = 8e-37
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = -2

Query: 210 IDVFIFTCDPTREPTIGVMNTVISAMCLDYPTDKLSVYLSDDAGAPITLHAIKEAYSFLA 31
           ID FI T DP +EPT+ VMNTVISAM LDYP +KL VY+SDD G+ +TL+ +KEA+ F  
Sbjct: 101 IDXFICTVDPKKEPTLEVMNTVISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEFAR 160

Query: 30  S 28
           S
Sbjct: 161 S 161


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score = 96.7 bits (239), Expect(2) = 2e-36
 Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
 Frame = -3

Query: 497 MEARLPFHVSHVKQPRATINRIHTVFLIVAILALLYYRFSVIFKSN----GKISIFPWLF 330
           ME  LP H+ HV++  A I+R H +    A++AL+YYR S + ++N    G   I PWL 
Sbjct: 50  MEGSLPRHLCHVQKSSAIIHRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLL 109

Query: 329 ITVSELLLWLFWFLGQAYRWKPITRTVFPERLPGDEKL 216
           +   EL+L   W L QA+RW+P+TR VFPERLP D++L
Sbjct: 110 VFAGELVLSFIWLLEQAFRWRPVTRAVFPERLPEDKQL 147



 Score = 82.0 bits (201), Expect(2) = 2e-36
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = -2

Query: 210 IDVFIFTCDPTREPTIGVMNTVISAMCLDYPTDKLSVYLSDDAGAPITLHAIKEAYSF 37
           IDVFI T DP +EPT+ VMNTVISAM LDYP +KL VY+SDD G+ +TL+ +KEA+ F
Sbjct: 150 IDVFICTVDPKKEPTLEVMNTVISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEF 207


>ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 678

 Score = 96.7 bits (239), Expect(2) = 2e-36
 Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
 Frame = -3

Query: 497 MEARLPFHVSHVKQPRATINRIHTVFLIVAILALLYYRFSVIFKSN----GKISIFPWLF 330
           ME  LP H+ HV++  A I+R H +    A++AL+YYR S + ++N    G   I PWL 
Sbjct: 1   MEGSLPRHLCHVQKSSAIIHRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLL 60

Query: 329 ITVSELLLWLFWFLGQAYRWKPITRTVFPERLPGDEKL 216
           +   EL+L   W L QA+RW+P+TR VFPERLP D++L
Sbjct: 61  VFAGELVLSFIWLLEQAFRWRPVTRAVFPERLPEDKQL 98



 Score = 82.0 bits (201), Expect(2) = 2e-36
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = -2

Query: 210 IDVFIFTCDPTREPTIGVMNTVISAMCLDYPTDKLSVYLSDDAGAPITLHAIKEAYSF 37
           IDVFI T DP +EPT+ VMNTVISAM LDYP +KL VY+SDD G+ +TL+ +KEA+ F
Sbjct: 101 IDVFICTVDPKKEPTLEVMNTVISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEF 158


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score = 92.4 bits (228), Expect(2) = 2e-36
 Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
 Frame = -3

Query: 497 MEARLPFHVSHVKQPRATINRIHTVFLIVAILALLYYRFSVIFKS---NGKISIFPWLFI 327
           M++ LP  + +V++  A INR +T+    A++AL+YYR S +F++          PWL +
Sbjct: 1   MDSSLPLQLCYVRKSTAIINRWYTLIHSTALMALVYYRASFLFQNPENRAHTPTSPWLLV 60

Query: 326 TVSELLLWLFWFLGQAYRWKPITRTVFPERLPGDEKL 216
              EL+L   W LGQAYRW+P+TRT+FPERLP D+ L
Sbjct: 61  FAGELILSFIWLLGQAYRWRPVTRTLFPERLPEDKHL 97



 Score = 85.9 bits (211), Expect(2) = 2e-36
 Identities = 40/61 (65%), Positives = 49/61 (80%)
 Frame = -2

Query: 210 IDVFIFTCDPTREPTIGVMNTVISAMCLDYPTDKLSVYLSDDAGAPITLHAIKEAYSFLA 31
           IDVFI T DP REPT GVMNTVISAM LDYP ++L VY+SDD G+ +TL+ +KEA++F  
Sbjct: 100 IDVFICTADPKREPTFGVMNTVISAMALDYPPERLHVYVSDDGGSSLTLYGMKEAWAFAR 159

Query: 30  S 28
           S
Sbjct: 160 S 160


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