BLASTX nr result
ID: Coptis24_contig00026206
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026206 (600 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|2... 244 1e-62 emb|CBI20261.3| unnamed protein product [Vitis vinifera] 243 1e-62 ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat... 243 1e-62 emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] 243 1e-62 ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat... 239 3e-61 >ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa] Length = 433 Score = 244 bits (622), Expect = 1e-62 Identities = 120/199 (60%), Positives = 146/199 (73%) Frame = +1 Query: 1 PDMFTYGIFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCVIDSLCFKKRIPQALEI 180 PD+FTYG FI +LT GK+ TA KL+ +M + C PDVVICNCVID+LCFKKR+P+AL + Sbjct: 174 PDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAV 233 Query: 181 FKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXXGSCTPNEITFICLLKA 360 F+ MKERG C PNVATYNSLIKH+CKI R GSC P+EITF LLK+ Sbjct: 234 FEGMKERG-CIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKS 292 Query: 361 AKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQGVQSVWTEMEKNGVGPDQRS 540 KKPEE GVLERMK N C++ DT N++LKL DW+ + V+ W EMEKNG+G D+RS Sbjct: 293 LKKPEEVAGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRS 352 Query: 541 YTIMIHRLHKKGRVEEALK 597 YTIMIH L+ KGRVE+AL+ Sbjct: 353 YTIMIHWLYDKGRVEDALR 371 >emb|CBI20261.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 243 bits (621), Expect = 1e-62 Identities = 120/198 (60%), Positives = 147/198 (74%) Frame = +1 Query: 1 PDMFTYGIFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCVIDSLCFKKRIPQALEI 180 PD FTYGIFINSLTK+GK+STA KLF++M E GC PDV ICNC+ID+LCFKKRIP+ALE+ Sbjct: 255 PDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEV 314 Query: 181 FKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXXGSCTPNEITFICLLKA 360 +EM ER C P+VATYNSLIKHLCKI R C PN T+ LLK+ Sbjct: 315 LREMNERD-CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKS 371 Query: 361 AKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQGVQSVWTEMEKNGVGPDQRS 540 KKPEE G+LERM+RN CR+ D YN+ILKL++DW ++S EME+NG+GPDQR+ Sbjct: 372 TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRT 431 Query: 541 YTIMIHRLHKKGRVEEAL 594 YTIMIH L+ KGR+++AL Sbjct: 432 YTIMIHGLYDKGRMDDAL 449 >ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200-like [Vitis vinifera] Length = 546 Score = 243 bits (621), Expect = 1e-62 Identities = 120/198 (60%), Positives = 147/198 (74%) Frame = +1 Query: 1 PDMFTYGIFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCVIDSLCFKKRIPQALEI 180 PD FTYGIFINSLTK+GK+STA KLF++M E GC PDV ICNC+ID+LCFKKRIP+ALE+ Sbjct: 292 PDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEV 351 Query: 181 FKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXXGSCTPNEITFICLLKA 360 +EM ER C P+VATYNSLIKHLCKI R C PN T+ LLK+ Sbjct: 352 LREMNERD-CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKS 408 Query: 361 AKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQGVQSVWTEMEKNGVGPDQRS 540 KKPEE G+LERM+RN CR+ D YN+ILKL++DW ++S EME+NG+GPDQR+ Sbjct: 409 TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRT 468 Query: 541 YTIMIHRLHKKGRVEEAL 594 YTIMIH L+ KGR+++AL Sbjct: 469 YTIMIHGLYDKGRMDDAL 486 >emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] Length = 546 Score = 243 bits (621), Expect = 1e-62 Identities = 120/198 (60%), Positives = 147/198 (74%) Frame = +1 Query: 1 PDMFTYGIFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCVIDSLCFKKRIPQALEI 180 PD FTYGIFINSLTK+GK+STA KLF++M E GC PDV ICNC+ID+LCFKKRIP+ALE+ Sbjct: 292 PDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEV 351 Query: 181 FKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXXGSCTPNEITFICLLKA 360 +EM ER C P+VATYNSLIKHLCKI R C PN T+ LLK+ Sbjct: 352 LREMNERD-CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKS 408 Query: 361 AKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQGVQSVWTEMEKNGVGPDQRS 540 KKPEE G+LERM+RN CR+ D YN+ILKL++DW ++S EME+NG+GPDQR+ Sbjct: 409 TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRT 468 Query: 541 YTIMIHRLHKKGRVEEAL 594 YTIMIH L+ KGR+++AL Sbjct: 469 YTIMIHGLYDKGRMDDAL 486 >ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200-like [Glycine max] Length = 481 Score = 239 bits (610), Expect = 3e-61 Identities = 115/199 (57%), Positives = 144/199 (72%) Frame = +1 Query: 1 PDMFTYGIFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCVIDSLCFKKRIPQALEI 180 PD+FTY FI +LTK GK+ TA KLFR M + G PDVVICNC+ID+LCFKKRIP+ALEI Sbjct: 240 PDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEI 299 Query: 181 FKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXXGSCTPNEITFICLLKA 360 F +M ERG C PNVATYNSLIK++CKI R GSC PN +T+ LLK+ Sbjct: 300 FCDMSERG-CEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKS 358 Query: 361 AKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQGVQSVWTEMEKNGVGPDQRS 540 K+P E VLERM+RN C + D YNM+L+L++ W+D GV+ W EME+NG GPD+RS Sbjct: 359 LKEPGEVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRS 418 Query: 541 YTIMIHRLHKKGRVEEALK 597 YTIMIH +KGRV++A++ Sbjct: 419 YTIMIHENFEKGRVKDAVR 437