BLASTX nr result

ID: Coptis24_contig00026202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026202
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266781.1| PREDICTED: uncharacterized protein LOC100246...   117   1e-24
ref|XP_002312225.1| predicted protein [Populus trichocarpa] gi|1...   115   3e-24
ref|XP_004139914.1| PREDICTED: uncharacterized protein LOC101217...   114   8e-24
ref|XP_002452117.1| hypothetical protein SORBIDRAFT_04g020040 [S...   114   8e-24
ref|NP_001143598.1| hypothetical protein [Zea mays] gi|194696156...   114   1e-23

>ref|XP_002266781.1| PREDICTED: uncharacterized protein LOC100246650 [Vitis vinifera]
           gi|297736099|emb|CBI24137.3| unnamed protein product
           [Vitis vinifera]
          Length = 127

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/71 (71%), Positives = 62/71 (87%)
 Frame = -3

Query: 215 LLWEKSGTWRWLVTKTRDSKPFFVGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 36
           +LWEKS TWRW+V K+RDSKPFF+ FATICG+VPGVIGY VM +TN+ N +LEAQLR  A
Sbjct: 3   VLWEKSETWRWIVRKSRDSKPFFLAFATICGVVPGVIGYCVMQFTNSRNPELEAQLRSNA 62

Query: 35  RPETLMMGQVN 3
           RP++LMMG+VN
Sbjct: 63  RPDSLMMGKVN 73


>ref|XP_002312225.1| predicted protein [Populus trichocarpa] gi|118487120|gb|ABK95389.1|
           unknown [Populus trichocarpa]
           gi|222852045|gb|EEE89592.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/71 (70%), Positives = 61/71 (85%)
 Frame = -3

Query: 215 LLWEKSGTWRWLVTKTRDSKPFFVGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 36
           +LWEKS  WRW+V KTRDSKPFF  FAT+CG+VPGVIGYFVM  TN+ N +LEA+LR+ A
Sbjct: 3   ILWEKSEAWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYFVMQTTNSRNPELEARLRQNA 62

Query: 35  RPETLMMGQVN 3
           RP++LMMG+VN
Sbjct: 63  RPDSLMMGKVN 73


>ref|XP_004139914.1| PREDICTED: uncharacterized protein LOC101217822 [Cucumis sativus]
          Length = 133

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = -3

Query: 215 LLWEKSGTWRWLVTKTRDSKPFFVGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 36
           +LWEKS TWRW+V KTRDSK FF  FAT+CG+VPG+IGY VM  TN+ NEQLEA+LR+ A
Sbjct: 3   ILWEKSETWRWVVRKTRDSKSFFFTFATVCGLVPGLIGYCVMQATNSTNEQLEARLRQNA 62

Query: 35  RPETLMMGQVN 3
           RPE+LMMGQVN
Sbjct: 63  RPESLMMGQVN 73


>ref|XP_002452117.1| hypothetical protein SORBIDRAFT_04g020040 [Sorghum bicolor]
           gi|241931948|gb|EES05093.1| hypothetical protein
           SORBIDRAFT_04g020040 [Sorghum bicolor]
          Length = 137

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/71 (73%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 LLWEKSGTWRWLVTKTRDSKPFFVGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 36
           +LWEKS  WRWLV +TRDSKPFF  FA +CG+VPGVIGY VM  T++ NEQLEA LR TA
Sbjct: 3   ILWEKSAGWRWLVRRTRDSKPFFFTFAALCGVVPGVIGYGVMQLTSSRNEQLEAHLRSTA 62

Query: 35  RPETLMMGQVN 3
           RPET MMGQVN
Sbjct: 63  RPETTMMGQVN 73


>ref|NP_001143598.1| hypothetical protein [Zea mays] gi|194696156|gb|ACF82162.1| unknown
           [Zea mays] gi|195623092|gb|ACG33376.1| hypothetical
           protein [Zea mays] gi|413936928|gb|AFW71479.1|
           hypothetical protein ZEAMMB73_611161 [Zea mays]
          Length = 138

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/71 (73%), Positives = 57/71 (80%)
 Frame = -3

Query: 215 LLWEKSGTWRWLVTKTRDSKPFFVGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 36
           +LWEKS  WRWLV +TRDSKPFF  FA +CG+VPGVIGY VM  T + NEQLEA LR TA
Sbjct: 3   ILWEKSAGWRWLVRRTRDSKPFFFTFAALCGVVPGVIGYGVMQLTGSRNEQLEAHLRSTA 62

Query: 35  RPETLMMGQVN 3
           RPET MMGQVN
Sbjct: 63  RPETTMMGQVN 73


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