BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026201
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   451   e-124
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              451   e-124
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   449   e-124
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   422   e-116
ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223...   421   e-115

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  451 bits (1161), Expect = e-124
 Identities = 225/282 (79%), Positives = 252/282 (89%)
 Frame = +3

Query: 6    SLNVPVLSTLSGDNEMPQISQTYNDAVEYYKEQRNKVSRLKKKIARTEGFREYKKIIDMA 185
            SLNVPVLS+LS D+E+ ++SQ Y +AVE YKEQRNKVSRLKKKIARTEGF+EYKKIIDM+
Sbjct: 893  SLNVPVLSSLSEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMS 952

Query: 186  TFTREKIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHVIFPLGETAA 365
             FT EKI+RLKARS RL  RI+QIEPSGWKEFLQ+S VIHE RALDINTH+IFPLGETAA
Sbjct: 953  KFTEEKIKRLKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAA 1012

Query: 366  AIRGENELWLAIVLHNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 545
            AIRGENELWLA+VL +K+LL LKPAQLA VCGSLVSEGIK+RP KN+SYIYE ST V+N+
Sbjct: 1013 AIRGENELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINV 1072

Query: 546  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 725
            +  LD+QR+S + LQEKH V+I C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL
Sbjct: 1073 ISLLDEQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 1132

Query: 726  LRRTIDLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 851
            LRRTID+L QIPKLPDI P+LQ  A+ ASNVMDRPPISELAG
Sbjct: 1133 LRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1174


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  451 bits (1161), Expect = e-124
 Identities = 225/282 (79%), Positives = 252/282 (89%)
 Frame = +3

Query: 6    SLNVPVLSTLSGDNEMPQISQTYNDAVEYYKEQRNKVSRLKKKIARTEGFREYKKIIDMA 185
            SLNVPVLS+LS D+E+ ++SQ Y +AVE YKEQRNKVSRLKKKIARTEGF+EYKKIIDM+
Sbjct: 783  SLNVPVLSSLSEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMS 842

Query: 186  TFTREKIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHVIFPLGETAA 365
             FT EKI+RLKARS RL  RI+QIEPSGWKEFLQ+S VIHE RALDINTH+IFPLGETAA
Sbjct: 843  KFTEEKIKRLKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAA 902

Query: 366  AIRGENELWLAIVLHNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 545
            AIRGENELWLA+VL +K+LL LKPAQLA VCGSLVSEGIK+RP KN+SYIYE ST V+N+
Sbjct: 903  AIRGENELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINV 962

Query: 546  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 725
            +  LD+QR+S + LQEKH V+I C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL
Sbjct: 963  ISLLDEQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 1022

Query: 726  LRRTIDLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 851
            LRRTID+L QIPKLPDI P+LQ  A+ ASNVMDRPPISELAG
Sbjct: 1023 LRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1064


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  449 bits (1155), Expect = e-124
 Identities = 222/282 (78%), Positives = 254/282 (90%)
 Frame = +3

Query: 6    SLNVPVLSTLSGDNEMPQISQTYNDAVEYYKEQRNKVSRLKKKIARTEGFREYKKIIDMA 185
            SLNVPVLS+LS ++E+ Q+SQ YNDAVE YK QRNKVSRLKK+IARTEGF+EYKKIID A
Sbjct: 878  SLNVPVLSSLSEEDEVLQLSQAYNDAVECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSA 937

Query: 186  TFTREKIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHVIFPLGETAA 365
             FT+EKI RLK RS RL+GRI+QIEP+GWKEFLQ+S VIHE+RALDINTHVIFPLGETAA
Sbjct: 938  KFTQEKIRRLKVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAA 997

Query: 366  AIRGENELWLAIVLHNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 545
            AIRGENELWLA+VL NK+LLDLKPAQLA VCGSLVSEGI++RP KN+S++YEPST V+N+
Sbjct: 998  AIRGENELWLAMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTTVLNV 1057

Query: 546  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 725
            ++ L++ +SS + LQEKH V+I C LDSQFSGMVEAWASGLTW+EIMMDCAMDEGDLARL
Sbjct: 1058 IDLLEETKSSILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARL 1117

Query: 726  LRRTIDLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 851
            LRRTIDLL QIPKLPDI P+LQ  A  AS+VMDRPPISELAG
Sbjct: 1118 LRRTIDLLAQIPKLPDIDPLLQSNAKGASSVMDRPPISELAG 1159


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Glycine max]
          Length = 1162

 Score =  422 bits (1085), Expect = e-116
 Identities = 210/282 (74%), Positives = 239/282 (84%)
 Frame = +3

Query: 6    SLNVPVLSTLSGDNEMPQISQTYNDAVEYYKEQRNKVSRLKKKIARTEGFREYKKIIDMA 185
            SLNVPVLS+LS ++E+   SQ Y DA+E YKEQRNKVSRLKKKI R+EG++EY KIID  
Sbjct: 881  SLNVPVLSSLSENDELLLQSQDYKDAIERYKEQRNKVSRLKKKIVRSEGYKEYFKIIDAV 940

Query: 186  TFTREKIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHVIFPLGETAA 365
             FT EKI+RLK RS RL+ RI+QIEPSGWKEF+Q+S VIHE RALDINTH+IFPLGETAA
Sbjct: 941  KFTEEKIKRLKNRSKRLINRIEQIEPSGWKEFMQVSNVIHEIRALDINTHIIFPLGETAA 1000

Query: 366  AIRGENELWLAIVLHNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 545
            AIRGENELWLA+VL NKILL+LKPAQLA VC SLVS GIK+RP KN+SYIYEPS  V   
Sbjct: 1001 AIRGENELWLAMVLRNKILLELKPAQLAAVCASLVSAGIKVRPGKNNSYIYEPSATVTKF 1060

Query: 546  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 725
            +  LD+QRS+ + +Q+KH V ISC LDSQF GMVEAWASGLTWRE+MMDCAMD+GDLARL
Sbjct: 1061 ITLLDEQRSALLAMQDKHEVTISCCLDSQFCGMVEAWASGLTWRELMMDCAMDDGDLARL 1120

Query: 726  LRRTIDLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 851
            LRRTIDLL QIPKLPDI P+L+  A  AS+VMDRPPISEL G
Sbjct: 1121 LRRTIDLLVQIPKLPDIDPLLKHNAKAASSVMDRPPISELVG 1162


>ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223540689|gb|EEF42252.1|
            helicase, putative [Ricinus communis]
          Length = 1161

 Score =  421 bits (1081), Expect = e-115
 Identities = 209/282 (74%), Positives = 247/282 (87%)
 Frame = +3

Query: 6    SLNVPVLSTLSGDNEMPQISQTYNDAVEYYKEQRNKVSRLKKKIARTEGFREYKKIIDMA 185
            SLNVPVL++LS ++E+   SQ Y+DAVE+YK QR KV+RLKKKIARTEGFREYKKI+D  
Sbjct: 880  SLNVPVLNSLSENDEVLHGSQAYHDAVEHYKGQRTKVARLKKKIARTEGFREYKKILDWK 939

Query: 186  TFTREKIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHVIFPLGETAA 365
            +FT +KI+RLKARS RL+ RI++IEPSGWKEFL+IS V+HE RALDINT VIFPLGETAA
Sbjct: 940  SFTEDKIKRLKARSNRLINRIEEIEPSGWKEFLKISNVVHEIRALDINTQVIFPLGETAA 999

Query: 366  AIRGENELWLAIVLHNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 545
            AIRGENELWLA+VL +KILLDLKPAQLA VC S+VSEGIK+R  +N+SYIYEPS+AV NI
Sbjct: 1000 AIRGENELWLAMVLRSKILLDLKPAQLAAVCASVVSEGIKVRAWENNSYIYEPSSAVFNI 1059

Query: 546  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 725
            +  L++QRSS + LQEKH V+ISC LDSQFSGMVEAWASGL+W+E+MMDCAMD+GDLARL
Sbjct: 1060 IGKLEEQRSSLLQLQEKHGVEISCYLDSQFSGMVEAWASGLSWKEMMMDCAMDDGDLARL 1119

Query: 726  LRRTIDLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 851
            +R+TIDLL QIPKLPDI P LQ  A  A ++MDRPPISEL+G
Sbjct: 1120 IRQTIDLLAQIPKLPDIDPALQSNAKTAYDIMDRPPISELSG 1161