BLASTX nr result

ID: Coptis24_contig00026199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026199
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    92   6e-17
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    92   6e-17
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002519140.1| sulfotransferase, putative [Ricinus communis...    86   2e-15

>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/116 (42%), Positives = 70/116 (60%)
 Frame = +3

Query: 129 KQQDEPVPKSTRRSSVQNRERATKAAREFTSEYPFCSVIMRASYVRVWFKLGLPTSFVKK 308
           +   E + +  R  + + +ER  +AA  F S+ PF  VI+R SYV   F L +P+SF + 
Sbjct: 180 RNTSETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFART 239

Query: 309 HLEKEVQHLTLQVSDGRTWPVSGSFYNQYYLVTKGWKEFVSDNHLEEDDICIFELV 476
            L      +TLQVSDG+ WPV  SF +    + +GW EFV +N+LEE D+CIFEL+
Sbjct: 240 FLNTVTGFVTLQVSDGKQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELI 295


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
 Frame = +3

Query: 87  RQKTRPRVSLSLPEKQQDE---PVPKSTRRSSVQN--------RERATKAAREFTSEYPF 233
           R++  P  + S P K +DE   P  K++  +S Q         ++RA  AA  F    PF
Sbjct: 242 RKRNEPDANES-PAKHKDEVEMPDLKTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPF 300

Query: 234 CSVIMRASYVRVWFKLGLPTSFVKKHLEKEVQHLTLQVSDGRTWPVSGSFYNQYYLVTKG 413
           C VI+R SYV   F L +P+ F +K+L    + + LQ SDG+ W V          ++KG
Sbjct: 301 CRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKG 360

Query: 414 WKEFVSDNHLEEDDICIFELVD 479
           W EFV DN+LEE D+C+FEL++
Sbjct: 361 WTEFVKDNNLEEGDVCVFELIN 382


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
 Frame = +3

Query: 87  RQKTRPRVSLSLPEKQQDE---PVPKSTRRSSVQN--------RERATKAAREFTSEYPF 233
           R++  P  + S P K +DE   P  K++  +S Q         ++RA  AA  F    PF
Sbjct: 398 RKRNEPDANES-PAKHKDEVEMPDLKTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPF 456

Query: 234 CSVIMRASYVRVWFKLGLPTSFVKKHLEKEVQHLTLQVSDGRTWPVSGSFYNQYYLVTKG 413
           C VI+R SYV   F L +P+ F +K+L    + + LQ SDG+ W V          ++KG
Sbjct: 457 CRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKG 516

Query: 414 WKEFVSDNHLEEDDICIFELVD 479
           W EFV DN+LEE D+C+FEL++
Sbjct: 517 WTEFVKDNNLEEGDVCVFELIN 538


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/109 (41%), Positives = 65/109 (59%)
 Frame = +3

Query: 153 KSTRRSSVQNRERATKAAREFTSEYPFCSVIMRASYVRVWFKLGLPTSFVKKHLEKEVQH 332
           K  R  +++ ++RA  AA  F    PFC VI+R SYV   F L +P+ F +K+L    + 
Sbjct: 222 KRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKF 281

Query: 333 LTLQVSDGRTWPVSGSFYNQYYLVTKGWKEFVSDNHLEEDDICIFELVD 479
           + LQ SDG+ W V          ++KGW EFV DN+LEE D+C+FEL++
Sbjct: 282 IKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELIN 330


>ref|XP_002519140.1| sulfotransferase, putative [Ricinus communis]
           gi|223541803|gb|EEF43351.1| sulfotransferase, putative
           [Ricinus communis]
          Length = 591

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/113 (39%), Positives = 69/113 (61%)
 Frame = +3

Query: 141 EPVPKSTRRSSVQNRERATKAAREFTSEYPFCSVIMRASYVRVWFKLGLPTSFVKKHLEK 320
           E + +  R  + + ++R   AA  F  + PF  VI+R SYV   F L +P+SF +++L  
Sbjct: 223 EALTRRWRAVTPEEKQRTICAAHTFKPDNPFFRVILRPSYVYRGFLLHIPSSFAQRYLTT 282

Query: 321 EVQHLTLQVSDGRTWPVSGSFYNQYYLVTKGWKEFVSDNHLEEDDICIFELVD 479
               +TLQVS+G+ WPV     N+   ++KGW EF  DN+LEE D+C+FEL++
Sbjct: 283 -TGCMTLQVSEGKQWPVRCVCRNRGAKLSKGWTEFAWDNNLEEGDVCVFELIN 334


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