BLASTX nr result

ID: Coptis24_contig00026197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026197
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260...   122   4e-26
ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002535466.1| conserved hypothetical protein [Ricinus comm...   102   4e-20
ref|XP_002301140.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...    93   2e-17

>ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera]
          Length = 604

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/138 (46%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
 Frame = +3

Query: 3   SNKTTYTDCKNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSACT--------DQTQL 158
           S  +++ +C+N+GSS DLN  E  ++H  RHFIDDWPKN+SD +A +        D+TQL
Sbjct: 386 SKSSSFMNCRNFGSSQDLNNHEPDSQHSLRHFIDDWPKNQSDRTAISWPDIDLQSDRTQL 445

Query: 159 XXXXXXXXXXXXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPI 338
                               +K   + L  S EF+PIQM LGVGS  NE  +R AN +PI
Sbjct: 446 SISIPMASSDFMSSTSSPTNDKLTLSPLRLSREFDPIQMGLGVGSVLNEPNQRQANWIPI 505

Query: 339 SWETSMGGPLGEALNKTN 392
           SWETSMGGPLGE L+ TN
Sbjct: 506 SWETSMGGPLGEVLHSTN 523


>ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|222860789|gb|EEE98331.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/134 (44%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
 Frame = +3

Query: 27  CKNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC--------TDQTQLXXXXXXXX 182
           C+N+GSS DL   ES ++H  R F+DDWPK++SD SA         +++TQL        
Sbjct: 72  CRNFGSSQDLTDQESVSQHSLRQFMDDWPKSQSDRSAVSWPELDQQSERTQLSISIPMAP 131

Query: 183 XXXXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSN----PNEQTRRPANLLPISWET 350
                       EK   + L  S EF+PIQM LGVG       NE  +R AN +PISW T
Sbjct: 132 ADFMSSTSSPNNEKVTLSPLRLSREFDPIQMGLGVGGGGGGIANEPNQRQANWIPISWGT 191

Query: 351 SMGGPLGEALNKTN 392
           SMGGPLGE L+ TN
Sbjct: 192 SMGGPLGEVLHNTN 205


>ref|XP_002535466.1| conserved hypothetical protein [Ricinus communis]
           gi|223523019|gb|EEF26917.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 352

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
 Frame = +3

Query: 6   NKTTYTDCKNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSACT--------DQTQLX 161
           N +    C+N+GSS DL   ++ ++H  R F+DDWPK++SD SA +        D+TQL 
Sbjct: 135 NSSPLISCRNFGSSQDLTDQDTVSQHSVRQFMDDWPKSQSDRSAVSWPQLDVQSDRTQLS 194

Query: 162 XXXXXXXXXXXXXXXXXMR-EKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPI 338
                               EK   + L  S + +PIQM LGVGS  N+Q +R AN +PI
Sbjct: 195 ISIPIGHHADYMSSTSSPNNEKVTLSPLRLSRDLDPIQMGLGVGSVINDQNQRQANWIPI 254

Query: 339 SWETSMGGPLGEALNKTNRT 398
           SWETS+GGPLGE L+ T+ +
Sbjct: 255 SWETSIGGPLGEVLHNTSNS 274


>ref|XP_002301140.1| predicted protein [Populus trichocarpa] gi|222842866|gb|EEE80413.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/132 (43%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
 Frame = +3

Query: 27  CKNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC--------TDQTQLXXXXXXXX 182
           C+N+GSS DL   ES ++H  R F+DD PK+ SD SA         +++TQL        
Sbjct: 394 CRNFGSSQDLTDQESVSQHSLRQFMDDCPKSHSDRSAVAWPGLDLQSERTQLSISIPMAP 453

Query: 183 XXXXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNP--NEQTRRPANLLPISWETSM 356
                       EK + + L  S EF+PI+M LGVG+    NE  +R AN +PISWETSM
Sbjct: 454 ADFVSSTSSSNNEKISLSPLRLSREFDPIKMGLGVGAGSVANEPNQRQANWIPISWETSM 513

Query: 357 GGPLGEALNKTN 392
           GGPLGE L+ TN
Sbjct: 514 GGPLGEVLHNTN 525


>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
 Frame = +3

Query: 3   SNKTTYTDCKNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC-------TDQTQLX 161
           S + +Y + +NY   +D +  E+Q +HPFR FIDDWPK++S+ S         +D TQL 
Sbjct: 380 SERGSYMNSRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLS 439

Query: 162 XXXXXXXXXXXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPIS 341
                             +EK   + L  S E +P+QM LGV S+ +  T++  N +PIS
Sbjct: 440 ISIPMSSSDFSSSSSSPTQEKLAFSPLRLSRELDPVQMGLGVSSDLSAPTQKQTNWIPIS 499

Query: 342 WETSMGGPLGEAL 380
           W +SMGGPLGE L
Sbjct: 500 WGSSMGGPLGEVL 512


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