BLASTX nr result

ID: Coptis24_contig00026189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026189
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protei...   248   8e-97
ref|XP_002522320.1| conserved hypothetical protein [Ricinus comm...   228   4e-90
ref|XP_003527666.1| PREDICTED: ASTRA-associated protein 1-like [...   213   4e-86
ref|XP_002313556.1| predicted protein [Populus trichocarpa] gi|2...   218   1e-85
ref|XP_004142532.1| PREDICTED: guanine nucleotide-binding protei...   205   1e-82

>ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protein subunit beta-like
           protein 1 homolog [Vitis vinifera]
           gi|302142603|emb|CBI19806.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  248 bits (634), Expect(2) = 8e-97
 Identities = 117/199 (58%), Positives = 153/199 (76%), Gaps = 1/199 (0%)
 Frame = +3

Query: 282 QGRDGTVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDS 461
           QGRDGTVKYWDI++GGLSR P +TI+TN+YHFCKLSL+KKP  C  Q+E           
Sbjct: 81  QGRDGTVKYWDIEEGGLSRSPSLTIKTNAYHFCKLSLMKKPCACARQAEG---------- 130

Query: 462 STEYNYNLKSRETIDAELCEGAHREAGQD-GQLEDFVPTEGTQYIAIAGEKSSEVEIWDL 638
             ++ +++  ++T+DAE+   +  +A +   +  D    EG +Y+AIAGE+SSEVEIWDL
Sbjct: 131 -PKHYHDMDVKDTVDAEMLNDSSGKAQESLTECSDAAHAEGPKYVAIAGEQSSEVEIWDL 189

Query: 639 NSAERLVRLPQSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIR 818
           N+AER+ +LPQ C G S ++ TK+RGMCMAVQAF+PSESQGFLN+L+GYEDGTMVWWDIR
Sbjct: 190 NTAERIAQLPQKCLGGSSNYCTKSRGMCMAVQAFLPSESQGFLNILSGYEDGTMVWWDIR 249

Query: 819 NPGVPLAAVKFHSEPVLSI 875
           NPG+P+ +VKFH EP+LSI
Sbjct: 250 NPGIPITSVKFHLEPILSI 268



 Score =  132 bits (332), Expect(2) = 8e-97
 Identities = 58/79 (73%), Positives = 70/79 (88%)
 Frame = +2

Query: 56  RPPPDPVAVLRGHRASVTDVCFHHSKPLLFTGAADGELRIWDSIQHRTLSSSWVHSAAHG 235
           RPPPDPVAVLRGHRASVTDVCFH S  +LFTG++DGELRIWD++QHRT+SS+WVHSAAHG
Sbjct: 4   RPPPDPVAVLRGHRASVTDVCFHPSNSILFTGSSDGELRIWDTVQHRTVSSAWVHSAAHG 63

Query: 236 IISVATSSSIGENKISGKG 292
           ++ VA S  IG+NK+  +G
Sbjct: 64  VVCVAASPLIGDNKLVSQG 82


>ref|XP_002522320.1| conserved hypothetical protein [Ricinus communis]
           gi|223538398|gb|EEF40004.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  228 bits (582), Expect(2) = 4e-90
 Identities = 116/210 (55%), Positives = 148/210 (70%), Gaps = 5/210 (2%)
 Frame = +3

Query: 267 EKTKFQGRDGTVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVD 446
           +K   QG+DGTVK WDIQ+GGLSR+P VTIRTNSYHFCKLSLVKKP   +V         
Sbjct: 77  DKVISQGKDGTVKLWDIQEGGLSRVPVVTIRTNSYHFCKLSLVKKPGDKVVH-------- 128

Query: 447 SQLDSSTEYNYNLKSRETIDAELC---EGAHREAGQ--DGQLEDFVPTEGTQYIAIAGEK 611
              D    + + +++ ET+D  +    E  H E         E+    +  + +AIAGE+
Sbjct: 129 ---DKGPNHQHEIEALETVDTNVSYDRENRHNENSSKCSSDSEEDKHIDVLKCVAIAGEQ 185

Query: 612 SSEVEIWDLNSAERLVRLPQSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYED 791
           SSEVEIWDLN+AER+ RL Q+C+G S    T+ RGMCMAVQAF+PSESQGFLN+LAGYED
Sbjct: 186 SSEVEIWDLNTAERISRLAQNCSGGSSSITTQKRGMCMAVQAFLPSESQGFLNLLAGYED 245

Query: 792 GTMVWWDIRNPGVPLAAVKFHSEPVLSITV 881
           G+M+WWD+R+PGVPL +VKFH+EPVLS+ +
Sbjct: 246 GSMLWWDMRSPGVPLTSVKFHTEPVLSLCI 275



 Score =  130 bits (326), Expect(2) = 4e-90
 Identities = 56/78 (71%), Positives = 69/78 (88%)
 Frame = +2

Query: 59  PPPDPVAVLRGHRASVTDVCFHHSKPLLFTGAADGELRIWDSIQHRTLSSSWVHSAAHGI 238
           PPPDP+ VLRGHRASVTD CFH SKP+LFTG+ADGELRIWD++QHRT+SS+WVHSAAHGI
Sbjct: 6   PPPDPITVLRGHRASVTDACFHPSKPILFTGSADGELRIWDTVQHRTISSAWVHSAAHGI 65

Query: 239 ISVATSSSIGENKISGKG 292
           IS+A+ +  G +K+  +G
Sbjct: 66  ISIASCNLNGNDKVISQG 83


>ref|XP_003527666.1| PREDICTED: ASTRA-associated protein 1-like [Glycine max]
          Length = 387

 Score =  213 bits (541), Expect(2) = 4e-86
 Identities = 109/202 (53%), Positives = 140/202 (69%), Gaps = 4/202 (1%)
 Frame = +3

Query: 282 QGRDGTVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDS 461
           QGRDGTVK W++ D GLSR+P +TI+TN+YHFCK S+VKK S           V S+   
Sbjct: 81  QGRDGTVKVWELGDAGLSRIPVLTIKTNTYHFCKFSMVKKHS-----------VWSKEGK 129

Query: 462 STEYNYNLKSRETIDAELCEGAHREAGQDGQLEDF----VPTEGTQYIAIAGEKSSEVEI 629
           ++E +Y  +     D E+ E    EA  +    +     +  EG QY+A++GEKSSEVEI
Sbjct: 130 ASEDSYRSELGGVPDREILEDRREEAYTNQSCSESFGENMYNEGLQYVALSGEKSSEVEI 189

Query: 630 WDLNSAERLVRLPQSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWW 809
           WDL SAE++V+LP S   +S     K RGMCMA+Q F+PSESQGFLNVLAGYEDG+M+WW
Sbjct: 190 WDLKSAEKVVQLPSSNPSNSSSPCNKGRGMCMALQLFLPSESQGFLNVLAGYEDGSMLWW 249

Query: 810 DIRNPGVPLAAVKFHSEPVLSI 875
           D+RNPGVP+ +VKFHSEPVLS+
Sbjct: 250 DVRNPGVPVTSVKFHSEPVLSV 271



 Score =  132 bits (332), Expect(2) = 4e-86
 Identities = 58/79 (73%), Positives = 72/79 (91%)
 Frame = +2

Query: 56  RPPPDPVAVLRGHRASVTDVCFHHSKPLLFTGAADGELRIWDSIQHRTLSSSWVHSAAHG 235
           RPPPDPVAVLRGHRASVTD+ FH SKP+LF+G+ADGE+RIWD++QHRT+SS+W+HSAAHG
Sbjct: 4   RPPPDPVAVLRGHRASVTDISFHPSKPILFSGSADGEVRIWDTLQHRTVSSAWLHSAAHG 63

Query: 236 IISVATSSSIGENKISGKG 292
           I++VA SSS+G NK   +G
Sbjct: 64  IVAVAGSSSLGNNKFVSQG 82


>ref|XP_002313556.1| predicted protein [Populus trichocarpa] gi|222849964|gb|EEE87511.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  218 bits (554), Expect(2) = 1e-85
 Identities = 114/205 (55%), Positives = 141/205 (68%), Gaps = 5/205 (2%)
 Frame = +3

Query: 282 QGRDGTVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDS 461
           QGRDGTVK WDI +GGLSR P +TI+TN+YHFCKLSLVKKP++ + Q E           
Sbjct: 81  QGRDGTVKCWDIDNGGLSREPSLTIKTNAYHFCKLSLVKKPNSSVRQGEG---------- 130

Query: 462 STEYNYNLKSRETIDAELCEGAHREAGQD-----GQLEDFVPTEGTQYIAIAGEKSSEVE 626
              Y +     ET+D            +D       LED +  +G++YIA+AGE+SSEVE
Sbjct: 131 -PNYKHEKDDTETVDTNSLGNKGINYEEDPVECSNPLED-LHADGSKYIAVAGEQSSEVE 188

Query: 627 IWDLNSAERLVRLPQSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVW 806
           IWDLN+AERL RLPQSC G S +  T  RGMCMAVQAF+PSESQGFL +L GYEDG+M+ 
Sbjct: 189 IWDLNTAERLARLPQSCIGGSSNISTNKRGMCMAVQAFLPSESQGFLYILVGYEDGSMLL 248

Query: 807 WDIRNPGVPLAAVKFHSEPVLSITV 881
           WD+RNPG  + +VKFH+EPVLS+ V
Sbjct: 249 WDMRNPGAFVNSVKFHTEPVLSLCV 273



 Score =  125 bits (315), Expect(2) = 1e-85
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = +2

Query: 56  RPPPDPVAVLRGHRASVTDVCFHHSKPLLFTGAADGELRIWDSIQHRTLSSSWVHSAAHG 235
           RP PDPVAVLRGHRASV D  FH SKPLLFTG+ DGELRIWD++QHRT+SSS VHSAAHG
Sbjct: 4   RPAPDPVAVLRGHRASVMDASFHPSKPLLFTGSTDGELRIWDTVQHRTVSSSRVHSAAHG 63

Query: 236 IISVATSSSIGENKISGKG 292
           IISVA S  IG+NK+  +G
Sbjct: 64  IISVAASPLIGDNKVISQG 82


>ref|XP_004142532.1| PREDICTED: guanine nucleotide-binding protein subunit beta-like
           protein 1 homolog [Cucumis sativus]
           gi|449511779|ref|XP_004164051.1| PREDICTED: guanine
           nucleotide-binding protein subunit beta-like protein 1
           homolog [Cucumis sativus]
          Length = 383

 Score =  205 bits (521), Expect(2) = 1e-82
 Identities = 105/200 (52%), Positives = 137/200 (68%)
 Frame = +3

Query: 282 QGRDGTVKYWDIQDGGLSRMPCVTIRTNSYHFCKLSLVKKPSTCLVQSENILSVDSQLDS 461
           QGRDGTVK WDI D  LSR+P V+I+TN+YHFCKLSLVK+PS     ++    ++ + + 
Sbjct: 81  QGRDGTVKCWDIDDRTLSRVPTVSIKTNAYHFCKLSLVKQPSDFSSHNDGPNCINDRDEK 140

Query: 462 STEYNYNLKSRETIDAELCEGAHREAGQDGQLEDFVPTEGTQYIAIAGEKSSEVEIWDLN 641
             E      S +       E ++R              +G +Y+A++GE+SSEVEIWDLN
Sbjct: 141 PVEATILGCSGDKAQGISTEHSYRSE-----------VDGLKYVAVSGEQSSEVEIWDLN 189

Query: 642 SAERLVRLPQSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIRN 821
           + ERL+RLP +  G   +  TK RG+CMAVQAF+PS+SQGFLNVL+GYEDG+M+WWD+RN
Sbjct: 190 AGERLLRLPPNSEGDCPNISTKDRGLCMAVQAFLPSKSQGFLNVLSGYEDGSMLWWDLRN 249

Query: 822 PGVPLAAVKFHSEPVLSITV 881
           P VPLA+VK H EPVLSI V
Sbjct: 250 PRVPLASVKCHVEPVLSICV 269



 Score =  128 bits (322), Expect(2) = 1e-82
 Identities = 60/79 (75%), Positives = 70/79 (88%)
 Frame = +2

Query: 56  RPPPDPVAVLRGHRASVTDVCFHHSKPLLFTGAADGELRIWDSIQHRTLSSSWVHSAAHG 235
           RPPPDPVAVLRGHRASV DV FH S+PLLF+G+ADGELRIWD+ Q+RT+SS+WVHSAAHG
Sbjct: 4   RPPPDPVAVLRGHRASVMDVSFHPSEPLLFSGSADGELRIWDTAQNRTVSSAWVHSAAHG 63

Query: 236 IISVATSSSIGENKISGKG 292
           IISVA S SIG N++  +G
Sbjct: 64  IISVACSRSIGTNRVVSQG 82


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