BLASTX nr result
ID: Coptis24_contig00026184
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026184 (1066 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding prote... 133 9e-29 emb|CBI21312.3| unnamed protein product [Vitis vinifera] 133 9e-29 emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera] 133 9e-29 ref|XP_002328932.1| predicted protein [Populus trichocarpa] gi|2... 97 5e-18 ref|XP_002512890.1| double-stranded RNA binding protein, putativ... 86 2e-14 >ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding protein 5 [Vitis vinifera] Length = 484 Score = 133 bits (334), Expect = 9e-29 Identities = 116/344 (33%), Positives = 157/344 (45%), Gaps = 38/344 (11%) Frame = -2 Query: 1065 AAMAAWSALKQMSIVGXXXXXXXXXXXXXXXEHLVVARVLSKFSAKRENRTLRHRNQSQV 886 AA+AAWSALK++ +G +VVARVLS F +K E+R +R +Q+Q Sbjct: 148 AAIAAWSALKRVPNLGSLSHLSKEAESREE--QVVVARVLSNFRSKDESRPIRRWDQNQA 205 Query: 885 RKRLILDH----------RVLQHQQWRTMGLXXXXXXXXSIQQR----TALLPRAXXXXX 748 R+R++ H Q Q+WR M L Q ALLP Sbjct: 206 RRRMVRGHGGSGSSSTSNNSQQFQKWRPMDLLMDSVPEGGTAQNQNCFVALLPPPPPRTA 265 Query: 747 XXXXXXXXTDESNYSSLCSPNKGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKKAII 568 ++ SL + IPVQ S ++ LEEHQ+DE+EWL K+ + Sbjct: 266 SKILPPISPRDT--LSLYPSTRPIPVQAIGRSQVKMPEVPTLLEEHQRDEEEWLDGKSNL 323 Query: 567 TEKPTGKD-PNNANPNSVFRQQPKYLSPF--------NSSFLD-----HTQQNIHPRPYR 430 KPT K+ P+NAN +SV+ Y PF N+S D H Q +I P+ Sbjct: 324 IRKPTEKECPSNANASSVYGANSIY-RPFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFG 382 Query: 429 PATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCAT--PPMRPPSSNSPI 256 T ++ GS R + +GGF H IAPAV IRSVIPVCA PPMR P SN P Sbjct: 383 NPTPSAMK--GSAGIHIPRTMGTGGFQPHRIAPAVQIRSVIPVCAAPPPPMRLPPSNHPT 440 Query: 255 APQ------KKQDLIPSVSDTVLKQAEQEVPTA--SSKLNSLHL 148 + IP+ + LK + E+ + SS+ N L L Sbjct: 441 RNEASPSALSASSSIPAHTGAGLKFNKPELYSTQLSSEFNKLQL 484 >emb|CBI21312.3| unnamed protein product [Vitis vinifera] Length = 481 Score = 133 bits (334), Expect = 9e-29 Identities = 116/344 (33%), Positives = 157/344 (45%), Gaps = 38/344 (11%) Frame = -2 Query: 1065 AAMAAWSALKQMSIVGXXXXXXXXXXXXXXXEHLVVARVLSKFSAKRENRTLRHRNQSQV 886 AA+AAWSALK++ +G +VVARVLS F +K E+R +R +Q+Q Sbjct: 145 AAIAAWSALKRVPNLGSLSHLSKEAESREE--QVVVARVLSNFRSKDESRPIRRWDQNQA 202 Query: 885 RKRLILDH----------RVLQHQQWRTMGLXXXXXXXXSIQQR----TALLPRAXXXXX 748 R+R++ H Q Q+WR M L Q ALLP Sbjct: 203 RRRMVRGHGGSGSSSTSNNSQQFQKWRPMDLLMDSVPEGGTAQNQNCFVALLPPPPPRTA 262 Query: 747 XXXXXXXXTDESNYSSLCSPNKGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKKAII 568 ++ SL + IPVQ S ++ LEEHQ+DE+EWL K+ + Sbjct: 263 SKILPPISPRDT--LSLYPSTRPIPVQAIGRSQVKMPEVPTLLEEHQRDEEEWLDGKSNL 320 Query: 567 TEKPTGKD-PNNANPNSVFRQQPKYLSPF--------NSSFLD-----HTQQNIHPRPYR 430 KPT K+ P+NAN +SV+ Y PF N+S D H Q +I P+ Sbjct: 321 IRKPTEKECPSNANASSVYGANSIY-RPFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFG 379 Query: 429 PATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCAT--PPMRPPSSNSPI 256 T ++ GS R + +GGF H IAPAV IRSVIPVCA PPMR P SN P Sbjct: 380 NPTPSAMK--GSAGIHIPRTMGTGGFQPHRIAPAVQIRSVIPVCAAPPPPMRLPPSNHPT 437 Query: 255 APQ------KKQDLIPSVSDTVLKQAEQEVPTA--SSKLNSLHL 148 + IP+ + LK + E+ + SS+ N L L Sbjct: 438 RNEASPSALSASSSIPAHTGAGLKFNKPELYSTQLSSEFNKLQL 481 >emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera] Length = 552 Score = 133 bits (334), Expect = 9e-29 Identities = 116/344 (33%), Positives = 157/344 (45%), Gaps = 38/344 (11%) Frame = -2 Query: 1065 AAMAAWSALKQMSIVGXXXXXXXXXXXXXXXEHLVVARVLSKFSAKRENRTLRHRNQSQV 886 AA+AAWSALK++ +G +VVARVLS F +K E+R +R +Q+Q Sbjct: 216 AAIAAWSALKRVPNLGSLSHLSKEAESREE--QVVVARVLSNFRSKDESRPIRRWDQNQA 273 Query: 885 RKRLILDH----------RVLQHQQWRTMGLXXXXXXXXSIQQR----TALLPRAXXXXX 748 R+R++ H Q Q+WR M L Q ALLP Sbjct: 274 RRRMVRGHGGSGSSSTSNNSQQFQKWRPMDLLMDSVPEGGTAQNQNCFVALLPPPPPRTA 333 Query: 747 XXXXXXXXTDESNYSSLCSPNKGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKKAII 568 ++ SL + IPVQ S ++ LEEHQ+DE+EWL K+ + Sbjct: 334 SKILPPISPRDT--LSLYPSTRPIPVQAIGRSQVKMPEVPTLLEEHQRDEEEWLDGKSNL 391 Query: 567 TEKPTGKD-PNNANPNSVFRQQPKYLSPF--------NSSFLD-----HTQQNIHPRPYR 430 KPT K+ P+NAN +SV+ Y PF N+S D H Q +I P+ Sbjct: 392 IRKPTEKECPSNANASSVYGANSIY-RPFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFG 450 Query: 429 PATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCAT--PPMRPPSSNSPI 256 T ++ GS R + +GGF H IAPAV IRSVIPVCA PPMR P SN P Sbjct: 451 NPTPSAMK--GSAGIHIPRTMGTGGFQPHRIAPAVQIRSVIPVCAAPPPPMRLPPSNHPT 508 Query: 255 APQ------KKQDLIPSVSDTVLKQAEQEVPTA--SSKLNSLHL 148 + IP+ + LK + E+ + SS+ N L L Sbjct: 509 RNEASPSALSASSSIPAHTGAGLKFNKPELYSTQLSSEFNKLQL 552 >ref|XP_002328932.1| predicted protein [Populus trichocarpa] gi|222839362|gb|EEE77699.1| predicted protein [Populus trichocarpa] Length = 234 Score = 97.4 bits (241), Expect = 5e-18 Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 20/162 (12%) Frame = -2 Query: 687 NKGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKKAIITEKPTGKD-PNNANPNSVFR 511 N+ IP+QVK S +I LEEH KDE+EWL K+ + +KP K+ +N+NP+S++ Sbjct: 31 NRPIPLQVKGKSQVQAPEIPVALEEHLKDEEEWLGTKSDVIKKPIEKEGTSNSNPSSLYA 90 Query: 510 QQPKYLS-PFNS------SFLDHTQQNIH----------PRPYRPATSMGIRTNGSNATT 382 Y PF++ S LD+T Q+ P P P S I T + T Sbjct: 91 SSSIYRPFPFSNTGKPVTSLLDNTSQHESTHISSRIFGSPNP-SPMASTSIHTPSN--TH 147 Query: 381 SQRMLNSGGFHVHNIAPAVHIRSVIPVCATP--PMRPPSSNS 262 R + +GGF+ H IAPAV IRSVIPVCA P P+RPP S S Sbjct: 148 IPRPMFTGGFNPHRIAPAVQIRSVIPVCAAPPSPIRPPQSPS 189 >ref|XP_002512890.1| double-stranded RNA binding protein, putative [Ricinus communis] gi|223547901|gb|EEF49393.1| double-stranded RNA binding protein, putative [Ricinus communis] Length = 477 Score = 85.5 bits (210), Expect = 2e-14 Identities = 89/295 (30%), Positives = 132/295 (44%), Gaps = 26/295 (8%) Frame = -2 Query: 1065 AAMAAWSALKQMSIVGXXXXXXXXXXXXXXXEHLVVARVLSKFSAKRE-NRTLRHRNQSQ 889 AA+AAWSALK+M + + VVARVLS F +K E N+ R ++ SQ Sbjct: 148 AAIAAWSALKRMPSL-DYLTNKEVVESREEQDQAVVARVLSNFRSKDEYNKQARKKDCSQ 206 Query: 888 VRKRLILDHR---------------VLQHQQWRTMGLXXXXXXXXSIQQRT---ALLPRA 763 R+RL+ +R L +Q + + L S Q+++ +LLP Sbjct: 207 ARRRLVKGYRDYSSASSSSSSTSSNSLHYQHRKLLDLLLDSALDSSTQKQSSFVSLLPPP 266 Query: 762 XXXXXXXXXXXXXTDESNY---SSLCSPNKGIPVQVKSNSLAMKQDIAPPLEEHQKDEDE 592 ++ Y SS C+P++ +QVK + +EEHQKDE+E Sbjct: 267 PPRTTSKILPPTSPIDNPYSYPSSRCNPHQ---IQVKGKQQTKE------IEEHQKDEEE 317 Query: 591 W--LCKKAIITEKPTGKDPNNANPNSVFRQQPKYLSPFNSSFLDHTQQNIHPRPYRPATS 418 W KK+I E + + +S++RQ P + +I R + P+++ Sbjct: 318 WPGAIKKSIEKESSSS---SVYGSSSLYRQFPH----------QESTSHIGNRIFGPSST 364 Query: 417 MGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCATPP--MRPPSSNSP 259 T S S SG + H IAPAV IRSVIPVCA PP +RP + +P Sbjct: 365 SIKSTPSSIHMCSNSPFYSGMLYPHRIAPAVQIRSVIPVCAAPPAAVRPAPAPAP 419