BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026161
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY70770.1| photosystem II core 34 kDa protein (chloroplast) ...   134   1e-29
ref|YP_007475870.1| photosystem II protein D2 [Calamus caryotoid...   134   1e-29
gb|AFY03537.1| psbD protein, partial (chloroplast) [Lagenaria si...   134   1e-29
gb|AEX32547.1| photosystem II protein D2 [Dunaliella tertiolecta]     134   1e-29
emb|CCO65891.1| Photosystem II D2 protein [Bathycoccus prasinos]      134   1e-29

>gb|AEY70770.1| photosystem II core 34 kDa protein (chloroplast) [Euglena viridis]
          Length = 352

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +2

Query: 2   NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 181
           NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL
Sbjct: 230 NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 289

Query: 182 ALN 190
           ALN
Sbjct: 290 ALN 292


>ref|YP_007475870.1| photosystem II protein D2 [Calamus caryotoides]
           gi|449326352|gb|AGE92935.1| photosystem II protein D2
           [Calamus caryotoides]
          Length = 353

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +2

Query: 2   NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 181
           NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL
Sbjct: 231 NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 290

Query: 182 ALN 190
           ALN
Sbjct: 291 ALN 293


>gb|AFY03537.1| psbD protein, partial (chloroplast) [Lagenaria siceraria]
          Length = 303

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +2

Query: 2   NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 181
           NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL
Sbjct: 231 NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 290

Query: 182 ALN 190
           ALN
Sbjct: 291 ALN 293


>gb|AEX32547.1| photosystem II protein D2 [Dunaliella tertiolecta]
          Length = 352

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +2

Query: 2   NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 181
           NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL
Sbjct: 230 NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 289

Query: 182 ALN 190
           ALN
Sbjct: 290 ALN 292


>emb|CCO65891.1| Photosystem II D2 protein [Bathycoccus prasinos]
          Length = 352

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +2

Query: 2   NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 181
           NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL
Sbjct: 230 NTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGL 289

Query: 182 ALN 190
           ALN
Sbjct: 290 ALN 292