BLASTX nr result

ID: Coptis24_contig00026159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026159
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853...   372   e-100
ref|XP_002514989.1| conserved hypothetical protein [Ricinus comm...   355   1e-95
ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|2...   341   1e-91
ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_003531184.1| PREDICTED: uncharacterized protein LOC100813...   291   1e-76

>ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853782 [Vitis vinifera]
          Length = 359

 Score =  372 bits (954), Expect = e-100
 Identities = 202/329 (61%), Positives = 230/329 (69%), Gaps = 15/329 (4%)
 Frame = +3

Query: 3   LGKPTPSKWDDAQKWLVGLSRGVERSSHATTKPRNSNADDRRLIAPVPQKEDXXXXXXDE 182
           LGKPTPSKWDDAQKWLVGLS G E++  + TKPRNSNADDRRLIAPVPQKE       DE
Sbjct: 44  LGKPTPSKWDDAQKWLVGLSGGGEKNQ-SKTKPRNSNADDRRLIAPVPQKEKDYSSCEDE 102

Query: 183 AIQDEG-------------ETKKIDSNESFWRINKTSEESSSAIKSICVRDMGTEMTPIA 323
             ++               ETKK+D +ESFW+INK SE+SSSA++SICVRDMGTEMTPI+
Sbjct: 103 GEEEANGCPGPASSNQYQVETKKVDCDESFWQINKASEDSSSAVRSICVRDMGTEMTPIS 162

Query: 324 SQEPSRTGTPLRATTPAVRSPISSRSSTPGRCPQGGQSTESYQTGLTSLGNRCVPVPFCR 503
           SQEPSRT TP+RATTP  RSPISS SSTPGRC         YQTGL+S  +R    P  R
Sbjct: 163 SQEPSRTATPIRATTPVARSPISSGSSTPGRC---------YQTGLSSTESRGEAAPVGR 213

Query: 504 ASGETRWTNREEDESNASKMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVK 683
             G     + + +ESNA KM ENKN E A  PNPL+ RA AWDEAERAK++ARYKREEVK
Sbjct: 214 GHGRF---SSDGEESNACKMPENKNSEHARKPNPLDTRATAWDEAERAKYLARYKREEVK 270

Query: 684 IQAWENHEKRKAEMEMKRIEVKAERLKSRAQEKLSNXXXXXXXXXXXXXXXXXXXXXXXX 863
           IQAWENHEKRKAEMEMKR+EVKA++LK+ AQEKL+N                        
Sbjct: 271 IQAWENHEKRKAEMEMKRMEVKADKLKAWAQEKLANKIAATRRIAEEKRASAEAKLNEKA 330

Query: 864 XXTSERADYMRRTGHLPSS--FKIPSLCW 944
             TSERADY+RRTG LPSS  FK+PSLCW
Sbjct: 331 ARTSERADYIRRTGRLPSSFYFKLPSLCW 359


>ref|XP_002514989.1| conserved hypothetical protein [Ricinus communis]
           gi|223546040|gb|EEF47543.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score =  355 bits (910), Expect = 1e-95
 Identities = 196/327 (59%), Positives = 228/327 (69%), Gaps = 13/327 (3%)
 Frame = +3

Query: 3   LGKPTPSKWDDAQKWLVGLSRGVERSSHATTKPRNSNADDRRLIAPVPQKEDXXXXXXDE 182
           LGKPTPSKWDDAQKWLVGLSRG +++    +KPRNSNADDRRLIAPVPQ+E       D+
Sbjct: 44  LGKPTPSKWDDAQKWLVGLSRGGDKNQ---SKPRNSNADDRRLIAPVPQQERDYLSGGDD 100

Query: 183 AIQDEG-------ETKKIDSNESFWRINKTSEESS-SAIKSICVRDMGTEMTPIASQEPS 338
              +E        ETKK+D +E  WRINKT + S+ SA++SICVRDMGTEMTPIASQEPS
Sbjct: 101 VEGEEANGWPDSTETKKVDCDEPIWRINKTVQNSTASAVRSICVRDMGTEMTPIASQEPS 160

Query: 339 RTGTPLRATTPAVRSPISSRSSTPGRCPQGGQSTES-YQTGLTSLGNRCVPVPFCRASGE 515
           RT TP+RA TP  RSPISS SSTP RC  G Q T+  YQ GL S  +R          GE
Sbjct: 161 RTATPIRAGTPVARSPISSGSSTPVRCQHGLQCTDQGYQAGLASTESR---------GGE 211

Query: 516 TRWTNREE--DESNASKMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVKIQ 689
               +R    +E N  KM ENK+L++A   NPLE+RA AWDEAERAK+MARYKREEVKIQ
Sbjct: 212 PSSASRGRHGEEPNGCKMSENKDLDEARNLNPLEMRATAWDEAERAKYMARYKREEVKIQ 271

Query: 690 AWENHEKRKAEMEMKRIEVKAERLKSRAQEKLSNXXXXXXXXXXXXXXXXXXXXXXXXXX 869
           AWENHEKRKAEMEMK++EVKAER+K+RAQEKL++                          
Sbjct: 272 AWENHEKRKAEMEMKKMEVKAERIKARAQEKLTSKLATTKRMAEEKRANAEAKLNEKAVR 331

Query: 870 TSERADYMRRTGHLPS--SFKIPSLCW 944
           T+ERADY+RRTGHLPS  SFK+PSLCW
Sbjct: 332 TAERADYIRRTGHLPSSFSFKLPSLCW 358


>ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|222852458|gb|EEE90005.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  341 bits (875), Expect = 1e-91
 Identities = 191/330 (57%), Positives = 218/330 (66%), Gaps = 16/330 (4%)
 Frame = +3

Query: 3    LGKPTPSKWDDAQKWLVGLSRGVERSSHATTKPRNSNADDRRLIAPVPQKEDXXXXXXDE 182
            LGKPTPSKWDDAQKWLVGLSRG        +KPRNSNADDRRLIAPVPQ E       DE
Sbjct: 44   LGKPTPSKWDDAQKWLVGLSRG-GGGDKKESKPRNSNADDRRLIAPVPQMEQEYSSGEDE 102

Query: 183  AI-------------QDEGETKKIDSNESFWRINKTSEESS-SAIKSICVRDMGTEMTPI 320
                           Q E ETK +D +ES WRINK ++ S+ +A++S+CVRDMGTEMTPI
Sbjct: 103  VEGKAENGCSISIINQYEVETKNVDCDESVWRINKPAQNSTMNAVRSVCVRDMGTEMTPI 162

Query: 321  ASQEPSRTGTPLRATTPAVRSPISSRSSTPGRCPQGGQSTESYQTGLTSLGNRCVPVPFC 500
            ASQEPSRT TP+RATTPA RSPISS SSTP R   G Q  E YQTGL    +R       
Sbjct: 163  ASQEPSRTATPIRATTPAARSPISSGSSTPVRGQHGLQGNEGYQTGLAVTESRG------ 216

Query: 501  RASGETRWTNREEDESNASKMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEV 680
               G    T     E N S++ EN + +QA   N LE RA+AWDEAERAK+MARYKREEV
Sbjct: 217  ETPGVVSATRHYGQEFNGSRIPENMDSDQARKMNALEARAMAWDEAERAKYMARYKREEV 276

Query: 681  KIQAWENHEKRKAEMEMKRIEVKAERLKSRAQEKLSNXXXXXXXXXXXXXXXXXXXXXXX 860
            KIQAWENHEKRKAEMEM+++EVKAERLK+RAQE+L+N                       
Sbjct: 277  KIQAWENHEKRKAEMEMRKMEVKAERLKARAQERLANKLASTKRIAEEKRANAEAKLNEK 336

Query: 861  XXXTSERADYMRRTGHLPS--SFKIPSLCW 944
               TSE+AD+MR TGHLPS  SFK+PSLCW
Sbjct: 337  AVKTSEKADHMRTTGHLPSSFSFKLPSLCW 366


>ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|222864665|gb|EEF01796.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  323 bits (828), Expect = 4e-86
 Identities = 183/330 (55%), Positives = 211/330 (63%), Gaps = 16/330 (4%)
 Frame = +3

Query: 3   LGKPTPSKWDDAQKWLVGLSRGVERSSHATTKPRNSNADDRRLIAPVPQKEDXXXXXXDE 182
           LGKPTPSKWDDAQKWLVGLSRG        ++PRNSNADDRRLIAPVPQ E       DE
Sbjct: 41  LGKPTPSKWDDAQKWLVGLSRG-GGGDRKESQPRNSNADDRRLIAPVPQMEHDYSSGEDE 99

Query: 183 A-------------IQDEGETKKIDSNESFWRINKTSEESS-SAIKSICVRDMGTEMTPI 320
                          Q E ETKK+D +ES WR+NK ++ S+ SA++SICVRDMGTEMTPI
Sbjct: 100 VGGEAANGCSISITNQYEVETKKVDCDESVWRVNKPAQNSTMSAVRSICVRDMGTEMTPI 159

Query: 321 ASQEPSRTGTPLRATTPAVRSPISSRSSTPGRCPQGGQSTESYQTGLTSLGNRCVPVPFC 500
           ASQEPSRT TP+RATTPA RSP+SS S TP R             GL   G        C
Sbjct: 160 ASQEPSRTTTPIRATTPAARSPVSSGSCTPVR-------------GLNGRGEAS-----C 201

Query: 501 RASGETRWTNREEDESNASKMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEV 680
              G +   N    ESN S+++EN   +Q    + LE RA+AWD+AERAK+MARYKREEV
Sbjct: 202 APRGVSATRNYYGQESNGSRIHENMESDQVRKVSTLETRAMAWDDAERAKYMARYKREEV 261

Query: 681 KIQAWENHEKRKAEMEMKRIEVKAERLKSRAQEKLSNXXXXXXXXXXXXXXXXXXXXXXX 860
           KIQAWENHEKRKAEME +++EVKAERLK+RAQE+L+N                       
Sbjct: 262 KIQAWENHEKRKAEMEKRKMEVKAERLKARAQERLANKLASTTRIAEEKRSNAEATLNEK 321

Query: 861 XXXTSERADYMRRTGHLPS--SFKIPSLCW 944
              TSE ADY+RRTGHLPS  SFK PSLCW
Sbjct: 322 AVKTSETADYIRRTGHLPSSFSFKFPSLCW 351


>ref|XP_003531184.1| PREDICTED: uncharacterized protein LOC100813335 [Glycine max]
          Length = 367

 Score =  291 bits (746), Expect = 1e-76
 Identities = 167/345 (48%), Positives = 203/345 (58%), Gaps = 31/345 (8%)
 Frame = +3

Query: 3    LGKPTPSKWDDAQKWLVGLSRGVERSSHATTKPRNSNADDRRLIAPVPQKEDXXXXXXDE 182
            +GKPTPSKWDDAQKWLVGLS+G    SH+ +KPRNSNADD RLIAPVPQKE+       E
Sbjct: 47   MGKPTPSKWDDAQKWLVGLSKGGGEKSHSKSKPRNSNADDLRLIAPVPQKENDYSSSEKE 106

Query: 183  ----------------------AIQDEGETKKIDSNESFWRINKTSEESSSA-----IKS 281
                                  A Q E E K+++ +ES WR N  + + SS      ++ 
Sbjct: 107  EEENDACHDFIMTNNIISANATAAQYEAEAKRVECDESNWRSNNNNNKRSSENYTIQVQP 166

Query: 282  ICVRDMGTEMTPIASQEPSRTGTPLRATTPAVRSPISSRSSTPGRCPQGGQSTESYQTGL 461
            IC RDMGTEMTPIASQEPSRTGTP+RATTPA RSPI S +STP R   G Q         
Sbjct: 167  ICFRDMGTEMTPIASQEPSRTGTPIRATTPATRSPIHSGASTPMRGQNGSQHV------- 219

Query: 462  TSLGNRCVPVPFCRASGETRWTNREEDESNASKMYENKNLEQATTPNPLEVRAIAWDEAE 641
                          A    +  N E   S   + +E+    QA   +PLE RA+AWDEAE
Sbjct: 220  --------------AETTRKCGNGEGSTSPCKRTHED---HQARKLSPLESRAMAWDEAE 262

Query: 642  RAKFMARYKREEVKIQAWENHEKRKAEMEMKRIEVKAERLKSRAQEKLSNXXXXXXXXXX 821
            RAK+MAR+KREEVKIQAWENH+ RKAEMEMK++EVKAER+K+ AQE+ +N          
Sbjct: 263  RAKYMARFKREEVKIQAWENHQIRKAEMEMKKMEVKAERMKALAQERFTNKLASTKRIAE 322

Query: 822  XXXXXXXXXXXXXXXXTSERADYMRRTGHLPS----SFKIPSLCW 944
                             +ER +Y+RRTGH+PS    SFK+PS+CW
Sbjct: 323  EKRANAQVKLNDKALRATERVEYIRRTGHVPSSFSLSFKLPSICW 367


Top