BLASTX nr result
ID: Coptis24_contig00026148
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026148 (275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB62040.1| CjMDR1 [Coptis japonica] 129 2e-28 ref|XP_003535294.1| PREDICTED: ABC transporter B family member 4... 124 8e-27 ref|XP_003591310.1| ABC transporter B family member [Medicago tr... 124 8e-27 dbj|BAM11098.1| ABC protein [Coptis japonica] 124 1e-26 ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4... 123 1e-26 >dbj|BAB62040.1| CjMDR1 [Coptis japonica] Length = 1289 Score = 129 bits (325), Expect = 2e-28 Identities = 66/91 (72%), Positives = 70/91 (76%) Frame = -3 Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94 ILRQDVAFFDKETNTGEVVGRM+GDTVLIQD++GEKVGKFIQLFSTF GGF IAF KGW Sbjct: 156 ILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAIGEKVGKFIQLFSTFIGGFLIAFVKGWL 215 Query: 93 XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1 GALM I +SKMASRGQ Sbjct: 216 LTLVMLTSIPPLVFCGALMTITISKMASRGQ 246 >ref|XP_003535294.1| PREDICTED: ABC transporter B family member 4-like [Glycine max] Length = 1282 Score = 124 bits (311), Expect = 8e-27 Identities = 61/91 (67%), Positives = 70/91 (76%) Frame = -3 Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94 ILRQDVAFFDKETNTGEV+GRM+GDTVLIQD+MGEKVGKF+QL +TF GGF IAF KGW Sbjct: 144 ILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFIKGWL 203 Query: 93 XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1 SGA MA+++ +MASRGQ Sbjct: 204 LTVVMLSTLPLLALSGATMAVIIGRMASRGQ 234 >ref|XP_003591310.1| ABC transporter B family member [Medicago truncatula] gi|355480358|gb|AES61561.1| ABC transporter B family member [Medicago truncatula] Length = 1289 Score = 124 bits (311), Expect = 8e-27 Identities = 61/91 (67%), Positives = 70/91 (76%) Frame = -3 Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94 ILRQDV FFDKETNTGEVVGRM+GDTVLIQD+MGEKVGKF+QL +TF GGF IAFTKGW Sbjct: 151 ILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFTKGWL 210 Query: 93 XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1 SGA MA+++ +MAS+GQ Sbjct: 211 LTVVMMSTLPFLVVSGAAMAVIIGRMASKGQ 241 >dbj|BAM11098.1| ABC protein [Coptis japonica] Length = 1292 Score = 124 bits (310), Expect = 1e-26 Identities = 64/91 (70%), Positives = 69/91 (75%) Frame = -3 Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94 ILRQDVAFFDKETNTGEVVGRM+GD V IQD+MGEKVGKFIQLFSTF GGF +AF +GW Sbjct: 159 ILRQDVAFFDKETNTGEVVGRMSGDIVRIQDAMGEKVGKFIQLFSTFIGGFIVAFVRGWL 218 Query: 93 XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1 SGA + IVVSKMASRGQ Sbjct: 219 LTLIMLSSIPVLVISGAFVTIVVSKMASRGQ 249 >ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4-like [Glycine max] Length = 1282 Score = 123 bits (309), Expect = 1e-26 Identities = 60/91 (65%), Positives = 70/91 (76%) Frame = -3 Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94 ILRQDVAFFDKETNTGEV+GRM+GDTVLIQD+MGEKVGKF+QL +TF GGF IAF +GW Sbjct: 144 ILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFVRGWL 203 Query: 93 XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1 SGA MA+++ +MASRGQ Sbjct: 204 LTVVMLSTLPLLALSGATMAVIIGRMASRGQ 234