BLASTX nr result

ID: Coptis24_contig00026148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026148
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB62040.1| CjMDR1 [Coptis japonica]                              129   2e-28
ref|XP_003535294.1| PREDICTED: ABC transporter B family member 4...   124   8e-27
ref|XP_003591310.1| ABC transporter B family member [Medicago tr...   124   8e-27
dbj|BAM11098.1| ABC protein [Coptis japonica]                         124   1e-26
ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4...   123   1e-26

>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/91 (72%), Positives = 70/91 (76%)
 Frame = -3

Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94
           ILRQDVAFFDKETNTGEVVGRM+GDTVLIQD++GEKVGKFIQLFSTF GGF IAF KGW 
Sbjct: 156 ILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAIGEKVGKFIQLFSTFIGGFLIAFVKGWL 215

Query: 93  XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1
                          GALM I +SKMASRGQ
Sbjct: 216 LTLVMLTSIPPLVFCGALMTITISKMASRGQ 246


>ref|XP_003535294.1| PREDICTED: ABC transporter B family member 4-like [Glycine max]
          Length = 1282

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/91 (67%), Positives = 70/91 (76%)
 Frame = -3

Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94
           ILRQDVAFFDKETNTGEV+GRM+GDTVLIQD+MGEKVGKF+QL +TF GGF IAF KGW 
Sbjct: 144 ILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFIKGWL 203

Query: 93  XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1
                         SGA MA+++ +MASRGQ
Sbjct: 204 LTVVMLSTLPLLALSGATMAVIIGRMASRGQ 234


>ref|XP_003591310.1| ABC transporter B family member [Medicago truncatula]
           gi|355480358|gb|AES61561.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1289

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/91 (67%), Positives = 70/91 (76%)
 Frame = -3

Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94
           ILRQDV FFDKETNTGEVVGRM+GDTVLIQD+MGEKVGKF+QL +TF GGF IAFTKGW 
Sbjct: 151 ILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFTKGWL 210

Query: 93  XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1
                         SGA MA+++ +MAS+GQ
Sbjct: 211 LTVVMMSTLPFLVVSGAAMAVIIGRMASKGQ 241


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/91 (70%), Positives = 69/91 (75%)
 Frame = -3

Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94
           ILRQDVAFFDKETNTGEVVGRM+GD V IQD+MGEKVGKFIQLFSTF GGF +AF +GW 
Sbjct: 159 ILRQDVAFFDKETNTGEVVGRMSGDIVRIQDAMGEKVGKFIQLFSTFIGGFIVAFVRGWL 218

Query: 93  XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1
                         SGA + IVVSKMASRGQ
Sbjct: 219 LTLIMLSSIPVLVISGAFVTIVVSKMASRGQ 249


>ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4-like [Glycine max]
          Length = 1282

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/91 (65%), Positives = 70/91 (76%)
 Frame = -3

Query: 273 ILRQDVAFFDKETNTGEVVGRMAGDTVLIQDSMGEKVGKFIQLFSTFTGGFTIAFTKGWX 94
           ILRQDVAFFDKETNTGEV+GRM+GDTVLIQD+MGEKVGKF+QL +TF GGF IAF +GW 
Sbjct: 144 ILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFVRGWL 203

Query: 93  XXXXXXXXXXXXXXSGALMAIVVSKMASRGQ 1
                         SGA MA+++ +MASRGQ
Sbjct: 204 LTVVMLSTLPLLALSGATMAVIIGRMASRGQ 234


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