BLASTX nr result

ID: Coptis24_contig00026137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026137
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    69   3e-10
ref|XP_002451072.1| hypothetical protein SORBIDRAFT_05g023780 [S...    68   9e-10
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    67   2e-09
ref|XP_002451074.1| hypothetical protein SORBIDRAFT_05g023790 [S...    67   2e-09
gb|EEC82234.1| hypothetical protein OsI_26396 [Oryza sativa Indi...    67   2e-09

>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = +3

Query: 174 EGEDRISSLPDEILHLIFSFMPTVDAVRSCVLSTRWKYLWTSIPYLDF 317
           E EDR+S +PD I+H I SFM T DA+++CVLS RW+YLW S+P L+F
Sbjct: 53  ESEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNF 100


>ref|XP_002451072.1| hypothetical protein SORBIDRAFT_05g023780 [Sorghum bicolor]
           gi|241936915|gb|EES10060.1| hypothetical protein
           SORBIDRAFT_05g023780 [Sorghum bicolor]
          Length = 303

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 156 GGQSCAEGEDRISSLPDEILHLIFSFMPTVDAVRSCVLSTRWKYLWTSIPYLD 314
           GG S  + +DR+S+LPD +LH I SF+    AV++CVL TRW++LW S+P LD
Sbjct: 27  GGSSAGDLDDRLSALPDSLLHTIMSFLKARQAVQTCVLGTRWRHLWRSVPCLD 79


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = +3

Query: 174 EGEDRISSLPDEILHLIFSFMPTVDAVRSCVLSTRWKYLWTSIPYLDF 317
           E +DR+S +PD ++H I SFM T DA+++CVLS RW+YLW S+P L F
Sbjct: 53  ESQDRLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSF 100


>ref|XP_002451074.1| hypothetical protein SORBIDRAFT_05g023790 [Sorghum bicolor]
           gi|241936917|gb|EES10062.1| hypothetical protein
           SORBIDRAFT_05g023790 [Sorghum bicolor]
          Length = 467

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +3

Query: 171 AEGEDRISSLPDEILHLIFSFMPTVDAVRSCVLSTRWKYLWTSIPYLD 314
           A G DR+SSLPD +LH+I SF+    AV++C+LSTRW++LW S+P LD
Sbjct: 22  AGGPDRLSSLPDSLLHIIMSFLKARQAVQTCLLSTRWRHLWRSVPCLD 69


>gb|EEC82234.1| hypothetical protein OsI_26396 [Oryza sativa Indica Group]
          Length = 369

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/52 (57%), Positives = 37/52 (71%)
 Frame = +3

Query: 156 GGQSCAEGEDRISSLPDEILHLIFSFMPTVDAVRSCVLSTRWKYLWTSIPYL 311
           GG +  EG DRISSL D +LH I  F+P V+A+R+CVLS RW  +WT IP L
Sbjct: 23  GGDAAYEGPDRISSLADALLHHILVFLPVVEAIRTCVLSRRWARVWTGIPRL 74


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