BLASTX nr result

ID: Coptis24_contig00026128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026128
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262626.2| PREDICTED: importin-11-like [Vitis vinifera]      187   6e-46
emb|CBI18252.3| unnamed protein product [Vitis vinifera]              187   6e-46
ref|XP_002323597.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002530502.1| importin, putative [Ricinus communis] gi|223...   171   4e-41
ref|XP_003552264.1| PREDICTED: importin-11-like [Glycine max]         171   6e-41

>ref|XP_002262626.2| PREDICTED: importin-11-like [Vitis vinifera]
          Length = 1011

 Score =  187 bits (476), Expect = 6e-46
 Identities = 94/114 (82%), Positives = 105/114 (92%)
 Frame = -2

Query: 344 MALTSSDLPAMYSLLKNSLSGDQTLRKPAEAALSQSENRPGFCSCLMEVITAKDLASQPD 165
           MAL++SDLPAMYSLL NSLS D+++RKPAEAALSQSE+RPGFCSCLMEVITAKDLA+Q D
Sbjct: 1   MALSASDLPAMYSLLTNSLSADESVRKPAEAALSQSESRPGFCSCLMEVITAKDLAAQVD 60

Query: 164 VRLLASVYFKNGVIRYWRHRRDSQGIGHEEKIHLRQKLLSHLREENNKIALQLA 3
           VRL+ASVYFKNGV RYWR+RRDS GI +EEKIHLRQKLL HLREEN +IAL LA
Sbjct: 61  VRLMASVYFKNGVNRYWRNRRDSSGISNEEKIHLRQKLLLHLREENYQIALMLA 114


>emb|CBI18252.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  187 bits (476), Expect = 6e-46
 Identities = 94/114 (82%), Positives = 105/114 (92%)
 Frame = -2

Query: 344 MALTSSDLPAMYSLLKNSLSGDQTLRKPAEAALSQSENRPGFCSCLMEVITAKDLASQPD 165
           MAL++SDLPAMYSLL NSLS D+++RKPAEAALSQSE+RPGFCSCLMEVITAKDLA+Q D
Sbjct: 1   MALSASDLPAMYSLLTNSLSADESVRKPAEAALSQSESRPGFCSCLMEVITAKDLAAQVD 60

Query: 164 VRLLASVYFKNGVIRYWRHRRDSQGIGHEEKIHLRQKLLSHLREENNKIALQLA 3
           VRL+ASVYFKNGV RYWR+RRDS GI +EEKIHLRQKLL HLREEN +IAL LA
Sbjct: 61  VRLMASVYFKNGVNRYWRNRRDSSGISNEEKIHLRQKLLLHLREENYQIALMLA 114


>ref|XP_002323597.1| predicted protein [Populus trichocarpa] gi|222868227|gb|EEF05358.1|
           predicted protein [Populus trichocarpa]
          Length = 962

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/114 (77%), Positives = 99/114 (86%)
 Frame = -2

Query: 344 MALTSSDLPAMYSLLKNSLSGDQTLRKPAEAALSQSENRPGFCSCLMEVITAKDLASQPD 165
           MAL++SDL  +YSLL NS+SGD+++RKPAEAALSQ E+RPGFCSCLMEVITA DLASQ D
Sbjct: 1   MALSASDLGTIYSLLTNSMSGDESVRKPAEAALSQFESRPGFCSCLMEVITAADLASQVD 60

Query: 164 VRLLASVYFKNGVIRYWRHRRDSQGIGHEEKIHLRQKLLSHLREENNKIALQLA 3
           VRLLASVYFKN + RYWR+RRDS  I  EEK HLRQKLLSHLREEN+KIA  LA
Sbjct: 61  VRLLASVYFKNSINRYWRNRRDSAAISSEEKNHLRQKLLSHLREENDKIAGLLA 114


>ref|XP_002530502.1| importin, putative [Ricinus communis] gi|223529959|gb|EEF31886.1|
           importin, putative [Ricinus communis]
          Length = 1011

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/114 (74%), Positives = 98/114 (85%)
 Frame = -2

Query: 344 MALTSSDLPAMYSLLKNSLSGDQTLRKPAEAALSQSENRPGFCSCLMEVITAKDLASQPD 165
           MAL+ SDLP +YS+L NS+SGDQ +R PAE ALS+ E+RPGFCSCLMEVITAKDL SQ D
Sbjct: 1   MALSGSDLPMIYSMLTNSMSGDQRVRGPAETALSEFESRPGFCSCLMEVITAKDLVSQID 60

Query: 164 VRLLASVYFKNGVIRYWRHRRDSQGIGHEEKIHLRQKLLSHLREENNKIALQLA 3
           VRLLASVYFKN + RYWR+RRDS GI  EEK HLRQKLLS+LREEN+KIA+ L+
Sbjct: 61  VRLLASVYFKNSINRYWRNRRDSSGISSEEKNHLRQKLLSYLREENDKIAVMLS 114


>ref|XP_003552264.1| PREDICTED: importin-11-like [Glycine max]
          Length = 1009

 Score =  171 bits (433), Expect = 6e-41
 Identities = 84/114 (73%), Positives = 99/114 (86%)
 Frame = -2

Query: 344 MALTSSDLPAMYSLLKNSLSGDQTLRKPAEAALSQSENRPGFCSCLMEVITAKDLASQPD 165
           MAL++SD+ AMYSLL NS+S D  LR PAE AL+QSE+RPGFCSCL+EVITAKDLASQ D
Sbjct: 1   MALSASDVAAMYSLLSNSMSADHRLRGPAEDALAQSESRPGFCSCLLEVITAKDLASQTD 60

Query: 164 VRLLASVYFKNGVIRYWRHRRDSQGIGHEEKIHLRQKLLSHLREENNKIALQLA 3
           VR++A+VYFKN V RYWRHRRDS GI +EEK+HLRQKLL + REEN++IAL LA
Sbjct: 61  VRMMATVYFKNSVNRYWRHRRDSSGISNEEKMHLRQKLLMYSREENDQIALMLA 114


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