BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026121
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   171   4e-41
emb|CBI22720.3| unnamed protein product [Vitis vinifera]              171   4e-41
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]   147   9e-34
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   129   3e-28
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   129   3e-28

>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/132 (63%), Positives = 106/132 (80%)
 Frame = -3

Query: 462 KTGKLMGTDKIADTLIMENMEALKILYSLWKDDYVHMEKLVSHGSAQSQYLLWRVNKRTV 283
           K+ +L+ TDKI+DT  +E  +  KILY LWKD+Y+ MEKL  HGS QSQ+LLW+V K T+
Sbjct: 380 KSCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTL 439

Query: 282 REHVFDETCHAALNLRLKLAYELEQEREIIQLPKDKRIGAQGKRFERSRQVNILLESSLM 103
             HV +E  H+ALNL L++AYELEQE+EIIQLP++KR+GA G RFER R+V ILLESSLM
Sbjct: 440 WGHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLM 499

Query: 102 KLDEALMLFYDF 67
           KLD+A+MLF DF
Sbjct: 500 KLDDAIMLFNDF 511


>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/132 (63%), Positives = 106/132 (80%)
 Frame = -3

Query: 462 KTGKLMGTDKIADTLIMENMEALKILYSLWKDDYVHMEKLVSHGSAQSQYLLWRVNKRTV 283
           K+ +L+ TDKI+DT  +E  +  KILY LWKD+Y+ MEKL  HGS QSQ+LLW+V K T+
Sbjct: 393 KSCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTL 452

Query: 282 REHVFDETCHAALNLRLKLAYELEQEREIIQLPKDKRIGAQGKRFERSRQVNILLESSLM 103
             HV +E  H+ALNL L++AYELEQE+EIIQLP++KR+GA G RFER R+V ILLESSLM
Sbjct: 453 WGHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLM 512

Query: 102 KLDEALMLFYDF 67
           KLD+A+MLF DF
Sbjct: 513 KLDDAIMLFNDF 524


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/144 (54%), Positives = 98/144 (68%), Gaps = 21/144 (14%)
 Frame = -3

Query: 435  KIADTLIMENMEALKILYSLWKDDYVHME---------------------KLVSHGSAQS 319
            +I+DT  +E  +  KILY LWKD+Y+ M                      KL  HGS QS
Sbjct: 578  EISDTTFVEKKDTAKILYQLWKDEYLQMGGNLFKXIEEDILAIYMIPSVLKLNLHGSRQS 637

Query: 318  QYLLWRVNKRTVREHVFDETCHAALNLRLKLAYELEQEREIIQLPKDKRIGAQGKRFERS 139
            Q+LLW+V K T+  HV +E  H+ALNL L++AYELEQE+EIIQLP++KR+GA G RFER 
Sbjct: 638  QFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERL 697

Query: 138  RQVNILLESSLMKLDEALMLFYDF 67
            R+V ILLESSLMKLD+A+MLF DF
Sbjct: 698  RKVRILLESSLMKLDDAIMLFNDF 721


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Cucumis sativus]
          Length = 518

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/132 (49%), Positives = 91/132 (68%)
 Frame = -3

Query: 462 KTGKLMGTDKIADTLIMENMEALKILYSLWKDDYVHMEKLVSHGSAQSQYLLWRVNKRTV 283
           KTG L+ T+KI+D+  ++  EA KILY LWKD+Y++MEK+       S  LLWRV++  +
Sbjct: 387 KTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNL 446

Query: 282 REHVFDETCHAALNLRLKLAYELEQEREIIQLPKDKRIGAQGKRFERSRQVNILLESSLM 103
            EHV DE  HA+LNL+L+LA+E+E+ +E++ LPKD       K+      V  LL SSL+
Sbjct: 447 WEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLV 506

Query: 102 KLDEALMLFYDF 67
           KLD+ALMLF+DF
Sbjct: 507 KLDDALMLFHDF 518


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Cucumis sativus]
          Length = 518

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/132 (49%), Positives = 91/132 (68%)
 Frame = -3

Query: 462 KTGKLMGTDKIADTLIMENMEALKILYSLWKDDYVHMEKLVSHGSAQSQYLLWRVNKRTV 283
           KTG L+ T+KI+D+  ++  EA KILY LWKD+Y++MEK+       S  LLWRV++  +
Sbjct: 387 KTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNL 446

Query: 282 REHVFDETCHAALNLRLKLAYELEQEREIIQLPKDKRIGAQGKRFERSRQVNILLESSLM 103
            EHV DE  HA+LNL+L+LA+E+E+ +E++ LPKD       K+      V  LL SSL+
Sbjct: 447 WEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLV 506

Query: 102 KLDEALMLFYDF 67
           KLD+ALMLF+DF
Sbjct: 507 KLDDALMLFHDF 518