BLASTX nr result
ID: Coptis24_contig00026118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026118 (610 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare] 94 2e-17 ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|2... 94 3e-17 emb|CBI29005.3| unnamed protein product [Vitis vinifera] 93 3e-17 ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat... 92 6e-17 emb|CBI24015.3| unnamed protein product [Vitis vinifera] 92 6e-17 >dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 628 Score = 94.0 bits (232), Expect = 2e-17 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = +2 Query: 2 VKNLRVCRDCHDVSKLISKVYDREIIVRDRNRFHHFKNGRCSCMDYW 142 VKNLRVC+DCHD +KLISKV+DREI++RDRNRFHHFK+G CSC DYW Sbjct: 582 VKNLRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628 >ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa] Length = 617 Score = 93.6 bits (231), Expect = 3e-17 Identities = 39/47 (82%), Positives = 42/47 (89%) Frame = +2 Query: 2 VKNLRVCRDCHDVSKLISKVYDREIIVRDRNRFHHFKNGRCSCMDYW 142 VKNLRVC DCH +KLISKVY+RE+IVRDRNRFHHFK G CSCMDYW Sbjct: 571 VKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617 >emb|CBI29005.3| unnamed protein product [Vitis vinifera] Length = 587 Score = 93.2 bits (230), Expect = 3e-17 Identities = 39/47 (82%), Positives = 44/47 (93%) Frame = +2 Query: 2 VKNLRVCRDCHDVSKLISKVYDREIIVRDRNRFHHFKNGRCSCMDYW 142 VKNLRVCRDCH V+KLISKVY REIIVRDRNRFHHF++G CSC+D+W Sbjct: 541 VKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 587 >ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405-like [Cucumis sativus] Length = 614 Score = 92.4 bits (228), Expect = 6e-17 Identities = 37/47 (78%), Positives = 44/47 (93%) Frame = +2 Query: 2 VKNLRVCRDCHDVSKLISKVYDREIIVRDRNRFHHFKNGRCSCMDYW 142 VKNLR+C DCHDVSK+ISK+++REIIVRDRNRFHHFK+G CSC D+W Sbjct: 568 VKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614 >emb|CBI24015.3| unnamed protein product [Vitis vinifera] Length = 569 Score = 92.4 bits (228), Expect = 6e-17 Identities = 38/46 (82%), Positives = 41/46 (89%) Frame = +2 Query: 5 KNLRVCRDCHDVSKLISKVYDREIIVRDRNRFHHFKNGRCSCMDYW 142 KNLR+CRDCH SKLISKVYDREII+RDRNRFHHF+ G CSC DYW Sbjct: 524 KNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569