BLASTX nr result

ID: Coptis24_contig00026111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026111
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...   100   1e-19
gb|ACH87180.1| unknown protein [Camellia sinensis]                    100   1e-19
ref|XP_002299315.1| predicted protein [Populus trichocarpa] gi|1...   100   1e-19
ref|XP_003553165.1| PREDICTED: uncharacterized protein LOC100799...    98   8e-19
ref|XP_002514895.1| conserved hypothetical protein [Ricinus comm...    97   1e-18

>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score =  100 bits (249), Expect = 1e-19
 Identities = 60/123 (48%), Positives = 73/123 (59%), Gaps = 11/123 (8%)
 Frame = -3

Query: 337 QNEQQTNKAFNELCTLVLNILGSPPLNNNTIPSSSH--------RTLSKQVSAAEFASXX 182
           + + Q ++ F EL  LVLN+L SPP   +  P S H        R  + Q+S A FAS  
Sbjct: 3   RQQDQQSRVFCELSALVLNLLRSPP---SPAPFSEHSPEVYTSRRPTTTQISPAGFASLL 59

Query: 181 XXXXXXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRAFLC---PPASSPK 11
                   LCGSVTF IG +LMPWVLGLV++FYFVG+VS LS LGRA +C    PA   K
Sbjct: 60  LGISLALMLCGSVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIICQATAPAKPRK 119

Query: 10  EIP 2
           EIP
Sbjct: 120 EIP 122


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/122 (46%), Positives = 74/122 (60%), Gaps = 10/122 (8%)
 Frame = -3

Query: 337 QNEQQTNKAFNELCTLVLNILGSPPL-------NNNTIPSSSHRTLSKQVSAAEFASXXX 179
           + + Q ++ F EL  L+LN+L SPP        +   +PSS  R  +  +S A FAS   
Sbjct: 3   RRQDQQSRVFCELSALILNLLRSPPTPIQFSDPSPAAVPSSRRRPETPPISPAGFASLLL 62

Query: 178 XXXXXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRAFLC---PPASSPKE 8
                  LCGSVTF IG +LMPWVLGLV++FY VG+VS+LS +GRA LC    PAS  KE
Sbjct: 63  GISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTTSPASPRKE 122

Query: 7   IP 2
           +P
Sbjct: 123 VP 124


>ref|XP_002299315.1| predicted protein [Populus trichocarpa] gi|118486493|gb|ABK95086.1|
           unknown [Populus trichocarpa]
           gi|118489282|gb|ABK96446.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222846573|gb|EEE84120.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 8/120 (6%)
 Frame = -3

Query: 337 QNEQQTNKAFNELCTLVLNILGSP-PLNNNT---IPSSSHRTLSKQVSAAEFASXXXXXX 170
           QN+ Q ++ F EL  LVLN+L SP P++ +    +P++  R    +++ A FAS      
Sbjct: 5   QNQDQQSRVFEELSALVLNLLRSPTPVSFSDQIPMPTTPVRRRLPEITPAGFASLLLGMS 64

Query: 169 XXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRAFLC----PPASSPKEIP 2
               LCGSVTF IG LLMPWVLGLV++FY  G+VST+S LGR+ LC    PP+S  KEIP
Sbjct: 65  LTLMLCGSVTFFIGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKEIP 124


>ref|XP_003553165.1| PREDICTED: uncharacterized protein LOC100799356 [Glycine max]
          Length = 126

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
 Frame = -3

Query: 337 QNEQQTNKAFNELCTLVLNILGSPPLNNNTIPSSSHRTLSKQVSAAEFASXXXXXXXXXX 158
           +++ + ++A  +L +LVLN+L SP   ++ +P +S R    Q+S A FAS          
Sbjct: 7   RHQDEQSRALYDLSSLVLNLLRSPLTFSDEVPPASRRPGQAQISPAGFASLLLGISLALM 66

Query: 157 LCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRAFLC---PPASSPKEIP 2
           LCGSVTF IG +LMPWVLGLV+LFY  G++STLS  GR+ LC    P S  K+IP
Sbjct: 67  LCGSVTFFIGFVLMPWVLGLVMLFYVAGILSTLSVFGRSILCYATSPPSPRKDIP 121


>ref|XP_002514895.1| conserved hypothetical protein [Ricinus communis]
           gi|223545946|gb|EEF47449.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 63/131 (48%), Positives = 77/131 (58%), Gaps = 14/131 (10%)
 Frame = -3

Query: 352 MMRVWQNEQQTNKAFNELCTLVLNILGSPPLN--------NNTIPSSSHRTLS---KQVS 206
           MMR  ++ Q  ++ F EL  LVLN+L SPP +        ++  PS S R       Q+S
Sbjct: 1   MMRSQEDHQ--SRVFYELSALVLNLLRSPPSSPSSSSAHFSDQSPSESQRRRRPSLSQIS 58

Query: 205 AAEFASXXXXXXXXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRAFLC-- 32
            A FAS          LCGSVTF IG +LMPWVLGLV++FY  GVVST+S LGR+FLC  
Sbjct: 59  PAGFASLMLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCHA 118

Query: 31  -PPASSPKEIP 2
             P S  KEIP
Sbjct: 119 MTPPSPRKEIP 129


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