BLASTX nr result
ID: Coptis24_contig00026109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00026109
(647 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera] 110 3e-38
emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera] 110 6e-38
emb|CBI31929.3| unnamed protein product [Vitis vinifera] 111 2e-37
emb|CAD41225.2| OSJNBa0010H02.12 [Oryza sativa Japonica Group] 124 8e-37
emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera] 110 2e-36
>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
Length = 1266
Score = 110 bits (276), Expect(2) = 3e-38
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Frame = +1
Query: 22 WGIEEKVSSITLDNASSND--VAVTSLLTSFGENLYFGGKIFHVRCCAHIMNLMVQDSLK 195
W ++ K+S+IT+DN SSND + + S S +L GKIFH+RC AH++NL+V++ L
Sbjct: 323 WNMDRKLSTITVDNCSSNDGMIDILSEKLSSSGSLLLNGKIFHMRCAAHVLNLIVKEGLD 382
Query: 196 EIKHVVENIRESVKYVILTPSRLHKFNEIVKQLKLTTTQSLVLDVSTRWNSTYDM 360
I+ +E IRESV Y TPSR+ KF + +QL+L + L LD TRWNSTY M
Sbjct: 383 VIRVEIEKIRESVAYWSATPSRVEKFEDAARQLRLPCNKKLCLDCKTRWNSTYLM 437
Score = 73.9 bits (180), Expect(2) = 3e-38
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +2
Query: 362 MLRYALLFK*VFPRYKVRDSQYEWLPSEDEWARASEVCRFLKIFNDATKTFSGKFYPTSN 541
ML A+ +K VFPR K R+ Y +PSE+EW A E+C LK+F + TK FSG+ YPT+N
Sbjct: 437 MLSIAITYKDVFPRLKQREKLYTTVPSEEEWNLAREICERLKLFYNITKLFSGRNYPTAN 496
Query: 542 LFFLK 556
FF+K
Sbjct: 497 TFFIK 501
>emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]
Length = 1068
Score = 110 bits (276), Expect(2) = 6e-38
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Frame = +1
Query: 22 WGIEEKVSSITLDNASSND--VAVTSLLTSFGENLYFGGKIFHVRCCAHIMNLMVQDSLK 195
W ++ K+S+IT+DN SSND + + S S +L GKIFH+RC AH++NL+V++ L
Sbjct: 295 WNMDRKLSTITVDNCSSNDGMIDILSEKLSSSGSLLLNGKIFHMRCAAHVLNLIVKEGLD 354
Query: 196 EIKHVVENIRESVKYVILTPSRLHKFNEIVKQLKLTTTQSLVLDVSTRWNSTYDM 360
I+ +E IRESV Y TPSR+ KF + +QL+L + L LD TRWNSTY M
Sbjct: 355 VIRVEIEKIRESVAYWSATPSRVEKFEDAARQLRLPCNKKLCLDCKTRWNSTYLM 409
Score = 72.8 bits (177), Expect(2) = 6e-38
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +2
Query: 362 MLRYALLFK*VFPRYKVRDSQYEWLPSEDEWARASEVCRFLKIFNDATKTFSGKFYPTSN 541
ML A+ +K VFPR K R+ Y +PSE+EW A E+C LK+F + TK FSG YPT+N
Sbjct: 409 MLSIAITYKDVFPRLKQREKLYTTVPSEEEWNLAREICERLKLFYNITKLFSGXNYPTAN 468
Query: 542 LFFLK 556
FF+K
Sbjct: 469 TFFIK 473
>emb|CBI31929.3| unnamed protein product [Vitis vinifera]
Length = 276
Score = 111 bits (277), Expect(2) = 2e-37
Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Frame = +1
Query: 22 WGIEEKVSSITLDNASSNDVAVTSLLTSF--GENLYFGGKIFHVRCCAHIMNLMVQDSLK 195
W ++ KVS++T+DN SSND + L+ ++L GKIFH+RC AH++NL+V++ L
Sbjct: 65 WNMDRKVSTVTVDNCSSNDGMINILVEKLCLSDSLLLNGKIFHMRCAAHVLNLIVKEGLD 124
Query: 196 EIKHVVENIRESVKYVILTPSRLHKFNEIVKQLKLTTTQSLVLDVSTRWNSTYDM 360
I+ +E IRESV Y TPSR+ KF + +QL++ + L LD TRWNSTY M
Sbjct: 125 VIEVEIEKIRESVAYWSATPSRMEKFEDAARQLRIPCNKKLSLDCKTRWNSTYLM 179
Score = 70.9 bits (172), Expect(2) = 2e-37
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 362 MLRYALLFK*VFPRYKVRDSQYEWLPSEDEWARASEVCRFLKIFNDATKTFSGKFYPTSN 541
ML A+ +K VFPR K R+ Y +P+E+EW A E+C LK+F + T+ FSG+ YPT+N
Sbjct: 179 MLSIAITYKDVFPRLKQREKYYMVVPTEEEWNMAKEICGRLKLFYNITELFSGRNYPTAN 238
Query: 542 LFFLK 556
FF+K
Sbjct: 239 TFFIK 243
>emb|CAD41225.2| OSJNBa0010H02.12 [Oryza sativa Japonica Group]
Length = 899
Score = 124 bits (310), Expect(2) = 8e-37
Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Frame = +1
Query: 1 IFQCLSVWGIEEKVSSITLDNASSNDVAVTSLLTSFGE--NLYFGGKIFHVRCCAHIMNL 174
I CL+ W IE+K++SIT DNASSND A LL F + +L+F GK H+RCCAHI+NL
Sbjct: 318 ISDCLASWRIEDKIASITFDNASSNDSAANLLLAKFTKRGSLWFYGKFLHIRCCAHILNL 377
Query: 175 MVQDSLKEIKHVVENIRESVKYVILTPSRLHKFNEIVKQLKLTTTQSLVLDVSTRWNSTY 354
+VQD L IKH+++ +R+++KY+ + +R +KF+ + L L + L +D TRW ST+
Sbjct: 378 IVQDGLAVIKHIIDKVRDTIKYIKKSNNRAYKFSADIDSLNLKSDMGLAIDSCTRWGSTF 437
Query: 355 DM 360
M
Sbjct: 438 KM 439
Score = 55.8 bits (133), Expect(2) = 8e-37
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +2
Query: 362 MLRYALLFK*VFPRYKVRDSQYEWLPSEDEWARASEVCRFLKIFNDATKTFSGKFYPTSN 541
ML+ A ++ Y D+ Y WLP+ +EW EV L + + AT+ FSG YPTSN
Sbjct: 439 MLQSAFFYRSALDVYAAGDANYRWLPTPEEWNLYCEVNDALSVIHAATEEFSGSTYPTSN 498
Query: 542 LFF 550
LF+
Sbjct: 499 LFY 501
>emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]
Length = 1368
Score = 110 bits (276), Expect(2) = 2e-36
Identities = 54/115 (46%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Frame = +1
Query: 22 WGIEEKVSSITLDNASSNDVAVTSLLT--SFGENLYFGGKIFHVRCCAHIMNLMVQDSLK 195
W ++ KVS+IT+DN SSND + L+ S +L GKIFH+RC H++NL+V++ L
Sbjct: 245 WNMDRKVSTITVDNCSSNDRMINILVEKLSLSNSLLLNGKIFHMRCATHVLNLIVKEGLD 304
Query: 196 EIKHVVENIRESVKYVILTPSRLHKFNEIVKQLKLTTTQSLVLDVSTRWNSTYDM 360
I+ +E IRESV Y TPSR+ KF + +QL++ + L LD TRWNSTY M
Sbjct: 305 VIEVEIEKIRESVAYWSATPSRMEKFEDAARQLRIPCNKKLSLDCKTRWNSTYLM 359
Score = 67.4 bits (163), Expect(2) = 2e-36
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2
Query: 362 MLRYALLFK*VFPRYKVRDSQYEWLPSEDEWARASEVCRFLKIFNDATKTFSGKFYPTSN 541
ML A+ +K VFP K R+ Y +PS++EW A E+C LK+F + T+ FSG+ YPT+N
Sbjct: 359 MLSIAITYKDVFPCLKQREKYYMVVPSKEEWNMAKEICGRLKLFYNITELFSGRNYPTAN 418
Query: 542 LFFLK 556
FF+K
Sbjct: 419 TFFIK 423