BLASTX nr result

ID: Coptis24_contig00026106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026106
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16325.3| unnamed protein product [Vitis vinifera]              296   4e-78
ref|XP_003541992.1| PREDICTED: uncharacterized protein LOC100812...   271   7e-71
ref|XP_003540187.1| PREDICTED: uncharacterized protein LOC100779...   269   4e-70
ref|XP_002314279.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68
ref|XP_004149918.1| PREDICTED: uncharacterized protein LOC101207...   262   6e-68

>emb|CBI16325.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score =  296 bits (757), Expect = 4e-78
 Identities = 146/198 (73%), Positives = 160/198 (80%)
 Frame = +1

Query: 121 MSGSQKEGRMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSANID 300
           M  SQ +GRMEGWL+LIRSNR GLQYSRKRYF+L+DH LK+FKS P+S  + PVRSA ID
Sbjct: 1   MGVSQNDGRMEGWLFLIRSNRFGLQYSRKRYFVLEDHYLKSFKSVPISKDEVPVRSAIID 60

Query: 301 GCIRVTDNGRESIHRKVLFIFTLYNTSNHNDQLKLGASSPEEAARWIRSLQEAASKECSY 480
            CIR TDNGRESIHRKV FIFTLYNTSNHNDQLKLGASSPEEAARW++S QEAA K    
Sbjct: 61  SCIRATDNGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAARWMQSFQEAALKAGPN 120

Query: 481 PEVNMIGCSKRKWQSFRLNRNKERSRTNSIDWTLCSSINTDLVTADVIAPSPWTIFGCQN 660
                +GCSK KW SFRL  +    RTNSIDWTLCSS + D +T+DVIAPSPWTIFGCQN
Sbjct: 121 TRGGGVGCSKSKWPSFRLICSNRIHRTNSIDWTLCSSTHMDPMTSDVIAPSPWTIFGCQN 180

Query: 661 GLRLFKEAKDRDVHGTKW 714
           GLRLFKEAKDR  HG KW
Sbjct: 181 GLRLFKEAKDRGSHG-KW 197


>ref|XP_003541992.1| PREDICTED: uncharacterized protein LOC100812931 [Glycine max]
          Length = 738

 Score =  271 bits (694), Expect = 7e-71
 Identities = 137/201 (68%), Positives = 155/201 (77%), Gaps = 4/201 (1%)
 Frame = +1

Query: 124 SGSQKEG---RMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSAN 294
           S SQ +G   RMEGWLYLIR NRIGLQ+SRKRYF+LD + L++FKS P+SN QDPVRSA 
Sbjct: 10  SASQSDGISSRMEGWLYLIRFNRIGLQFSRKRYFVLDGNLLRSFKSVPVSNNQDPVRSAI 69

Query: 295 IDGCIRVTDNGRESIHRKVLFIFTLYNTSNHNDQLKLGASSPEEAARWIRSLQEAASKEC 474
           +D CIRV DNGRES++RKV FIFTLYNT NHNDQLK GAS PEEAARWI+S  EA+ K  
Sbjct: 70  VDSCIRVMDNGRESVNRKVFFIFTLYNTLNHNDQLKFGASRPEEAARWIQSFHEASLKGA 129

Query: 475 SYPEVNMIGCSKRKWQSFRLN-RNKERSRTNSIDWTLCSSINTDLVTADVIAPSPWTIFG 651
                + +GCSKR+WQSFRL+  +  RS  NS+DWTL S        ADVIAPSPWTIFG
Sbjct: 130 PDGGDDTVGCSKRRWQSFRLSGSSSSRSHPNSVDWTLSS--------ADVIAPSPWTIFG 181

Query: 652 CQNGLRLFKEAKDRDVHGTKW 714
           CQNGLRLFKEAKDRD  G KW
Sbjct: 182 CQNGLRLFKEAKDRDSSGKKW 202


>ref|XP_003540187.1| PREDICTED: uncharacterized protein LOC100779206 [Glycine max]
          Length = 731

 Score =  269 bits (688), Expect = 4e-70
 Identities = 133/196 (67%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
 Frame = +1

Query: 130 SQKEGRMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSANIDGCI 309
           S    RMEGWLYLIR NRIGLQ+SRKRYF+LD + L++FKS P+SN QDPVRSA +D CI
Sbjct: 13  SDASSRMEGWLYLIRFNRIGLQFSRKRYFVLDGNLLRSFKSVPVSNNQDPVRSAIVDSCI 72

Query: 310 RVTDNGRESIHRKVLFIFTLYNTSNHNDQLKLGASSPEEAARWIRSLQEAASKECSYPEV 489
           RV DNGRES++RKV FIFTLYNTSNHNDQLK GAS PEEAARWI+S  EA+ +       
Sbjct: 73  RVMDNGRESVNRKVFFIFTLYNTSNHNDQLKFGASRPEEAARWIQSFHEASLRGAPDGGD 132

Query: 490 NMIGCSKRKWQSFRLNRNKER-SRTNSIDWTLCSSINTDLVTADVIAPSPWTIFGCQNGL 666
           + +GCSKR+WQSFRL+ +    S  NS+DWTL S        ADVIAPSPWTIFGCQNGL
Sbjct: 133 DAVGCSKRRWQSFRLSGSSSSISHPNSVDWTLSS--------ADVIAPSPWTIFGCQNGL 184

Query: 667 RLFKEAKDRDVHGTKW 714
           RLFKEAKDRD +G KW
Sbjct: 185 RLFKEAKDRDSNGKKW 200


>ref|XP_002314279.1| predicted protein [Populus trichocarpa] gi|222850687|gb|EEE88234.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  263 bits (672), Expect = 3e-68
 Identities = 140/190 (73%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
 Frame = +1

Query: 148 MEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSANIDGCIRVTDNG 327
           MEGWLYLIRSNRIGLQYSRKRYF+L  H L++FKS PLS  QDPVRSA ID CIRVTDNG
Sbjct: 1   MEGWLYLIRSNRIGLQYSRKRYFVLQHHLLQSFKSVPLSKNQDPVRSAIIDSCIRVTDNG 60

Query: 328 RESIHRKVLFIFTLYNTSNHNDQLKLGASSPEEAARWIRSLQEAASKECS-YPEVNMIGC 504
           RESIHRKV FIFT+YNTSNHNDQLKLGASSPEEAARWI S+QEAA K  + +  + + G 
Sbjct: 61  RESIHRKVFFIFTVYNTSNHNDQLKLGASSPEEAARWIHSIQEAALKVANCFCNLQLSGP 120

Query: 505 SKRKWQSFRLNRNKERSRTNSIDWTLCSSINTDLVTADVIAPSPWTIFGCQNGLRLFKEA 684
           S   W    +N NK       IDWT CSS +TDLVT DVIAPSPWTIFGCQNGLRLFKEA
Sbjct: 121 S---W----VNHNK------PIDWTHCSSTHTDLVT-DVIAPSPWTIFGCQNGLRLFKEA 166

Query: 685 KDRDVHGTKW 714
           KDRD HG KW
Sbjct: 167 KDRDSHG-KW 175


>ref|XP_004149918.1| PREDICTED: uncharacterized protein LOC101207368 [Cucumis sativus]
          Length = 733

 Score =  262 bits (669), Expect = 6e-68
 Identities = 127/198 (64%), Positives = 149/198 (75%)
 Frame = +1

Query: 121 MSGSQKEGRMEGWLYLIRSNRIGLQYSRKRYFILDDHCLKNFKSTPLSNKQDPVRSANID 300
           M    ++G+MEGWLYLIRSNR GLQYS+KRYF+L D CLK+FKS P+S  ++P RSA ID
Sbjct: 1   MGAPIEDGKMEGWLYLIRSNRFGLQYSQKRYFVLQDDCLKSFKSVPVSGNEEPNRSAVID 60

Query: 301 GCIRVTDNGRESIHRKVLFIFTLYNTSNHNDQLKLGASSPEEAARWIRSLQEAASKECSY 480
             IRVTDNGRESIHRKV FIFTL+NT N ND+LKLGASSPE+AARWIRSL +   K CS 
Sbjct: 61  SYIRVTDNGRESIHRKVFFIFTLHNTVNQNDRLKLGASSPEDAARWIRSLLDTTLKGCSD 120

Query: 481 PEVNMIGCSKRKWQSFRLNRNKERSRTNSIDWTLCSSINTDLVTADVIAPSPWTIFGCQN 660
           P  N    SKR++   R   +K      SIDWT+CSS+  + +T+DVIAPSPW IFGCQN
Sbjct: 121 PTRNFRDRSKRQYPVLRFRGSKRMDWKASIDWTVCSSVQMEAMTSDVIAPSPWKIFGCQN 180

Query: 661 GLRLFKEAKDRDVHGTKW 714
           GLRLFKEAKD D H  +W
Sbjct: 181 GLRLFKEAKDNDSHRRQW 198


Top