BLASTX nr result

ID: Coptis24_contig00026097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026097
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66330.1| hypothetical protein VITISV_000598 [Vitis vinifera]    69   4e-10
emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]    69   5e-10
emb|CAN65707.1| hypothetical protein VITISV_020730 [Vitis vinifera]    67   1e-09
emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]    67   2e-09
emb|CAN74004.1| hypothetical protein VITISV_006235 [Vitis vinifera]    67   2e-09

>emb|CAN66330.1| hypothetical protein VITISV_000598 [Vitis vinifera]
          Length = 2691

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +2

Query: 23   RVRISHLQFADDTLIFLGAEVGQVRWLRGILCCFEAVSGLRVNLAKSKMYGVG-NVPFLS 199
            R R+SHLQFADDT++F      +V+ L+ +L  F  +SGL+VNL KS ++G+  +   LS
Sbjct: 2199 RCRVSHLQFADDTILFASPREDEVQTLKSLLLVFGQISGLKVNLDKSNLFGINLDQNHLS 2258

Query: 200  RFASVLDCQA 229
            R AS+LDC+A
Sbjct: 2259 RLASLLDCKA 2268


>emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = +2

Query: 23   RVRISHLQFADDTLIFLGAEVGQVRWLRGILCCFEAVSGLRVNLAKSKMYGVG-NVPFLS 199
            R+R+SHLQFADDT+ F       +  L+ +L  FE +SGL+VNL KS +YG+      LS
Sbjct: 1380 RIRVSHLQFADDTIFFSSTREEDMMTLKNVLLVFEHISGLKVNLDKSNIYGINLEQNHLS 1439

Query: 200  RFASVLDCQA 229
            R A +LDC+A
Sbjct: 1440 RLAEMLDCKA 1449


>emb|CAN65707.1| hypothetical protein VITISV_020730 [Vitis vinifera]
          Length = 350

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +2

Query: 23  RVRISHLQFADDTLIFLGAEVGQVRWLRGILCCFEAVSGLRVNLAKSKMYGVG-NVPFLS 199
           R R+SHLQFADDT+ F  +   +++ L+ +L  F  +SGL+VNL KS +YG+  +   LS
Sbjct: 10  RTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQALLS 69

Query: 200 RFASVLDCQA 229
           R A +LDC+A
Sbjct: 70  RLAEMLDCKA 79


>emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]
          Length = 1750

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +2

Query: 23   RVRISHLQFADDTLIFLGAEVGQVRWLRGILCCFEAVSGLRVNLAKSKMYGVG-NVPFLS 199
            R R+SHLQFADDT+ F  +   +++ L+ +L  F  +SGL+VNL KS +YG+  +   LS
Sbjct: 1280 RTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLS 1339

Query: 200  RFASVLDCQA 229
            R A +LDC+A
Sbjct: 1340 RLAEMLDCKA 1349


>emb|CAN74004.1| hypothetical protein VITISV_006235 [Vitis vinifera]
          Length = 1768

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +2

Query: 23   RVRISHLQFADDTLIFLGAEVGQVRWLRGILCCFEAVSGLRVNLAKSKMYGVG-NVPFLS 199
            R R+SHLQFADDT+ F  +   +++ L+ +L  F  +SGL+VNL KS +YG+  +   LS
Sbjct: 1254 RTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIYGINLDQAHLS 1313

Query: 200  RFASVLDCQA 229
            R A +LDC+A
Sbjct: 1314 RLAEMLDCKA 1323


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