BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026094
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...   175   6e-42
emb|CBI25450.3| unnamed protein product [Vitis vinifera]              175   6e-42
emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]   175   6e-42
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...   156   2e-36
ref|XP_002879856.1| pentatricopeptide repeat-containing protein ...   154   8e-36

>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score =  175 bits (443), Expect = 6e-42
 Identities = 87/183 (47%), Positives = 129/183 (70%)
 Frame = +3

Query: 48  NETNFYPFTKTPKRFDTDIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTF 227
           N + F+  T+ P  ++   PT A+YD LI+ AGR+RD  ++  LLNKR +DGCFNT+ TF
Sbjct: 20  NTSRFFN-TQNPNPYE---PTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTF 75

Query: 228 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEK 407
            F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+   V+ES+R++++M++ 
Sbjct: 76  DFITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQS 134

Query: 408 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKA 587
           + GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L  +CF G+++ A
Sbjct: 135 DHGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCFTGNLEAA 194

Query: 588 VEV 596
           V V
Sbjct: 195 VGV 197


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  175 bits (443), Expect = 6e-42
 Identities = 87/183 (47%), Positives = 129/183 (70%)
 Frame = +3

Query: 48  NETNFYPFTKTPKRFDTDIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTF 227
           N + F+  T+ P  ++   PT A+YD LI+ AGR+RD  ++  LLNKR +DGCFNT+ TF
Sbjct: 20  NTSRFFN-TQNPNPYE---PTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTF 75

Query: 228 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEK 407
            F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+   V+ES+R++++M++ 
Sbjct: 76  DFITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQS 134

Query: 408 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKA 587
           + GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L  +CF G+++ A
Sbjct: 135 DHGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCFTGNLEAA 194

Query: 588 VEV 596
           V V
Sbjct: 195 VGV 197


>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score =  175 bits (443), Expect = 6e-42
 Identities = 87/183 (47%), Positives = 129/183 (70%)
 Frame = +3

Query: 48  NETNFYPFTKTPKRFDTDIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTF 227
           N + F+  T+ P  ++   PT A+YD LI+ AGR+RD  ++  LLNKR +DGCFNT+ TF
Sbjct: 20  NTSRFFN-TQNPNPYE---PTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTF 75

Query: 228 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEK 407
            F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+   V+ES+R++++M++ 
Sbjct: 76  DFITNTDAGLSV-LDELSQALAHLDKGFXRKSAYDSLIARLCRLKRVDESLRLVDTMVQS 134

Query: 408 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKA 587
           + GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L  +CF G+++ A
Sbjct: 135 DHGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCFTGNLEAA 194

Query: 588 VEV 596
           V V
Sbjct: 195 VGV 197


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  156 bits (395), Expect = 2e-36
 Identities = 69/166 (41%), Positives = 116/166 (69%)
 Frame = +3

Query: 99  DIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDL 278
           D PT+A+YD L++ AG  RD  TL+ LLNKR +D CFNT+ TFKF+T T+   +  LDDL
Sbjct: 323 DKPTAAYYDGLVNAAGHERDFKTLHHLLNKRVRDHCFNTTNTFKFITNTDNSLSV-LDDL 381

Query: 279 VHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLT 458
           +  + ++DKG  R +A++ LI  LCK D + ES+ ++  M +++ G++  +F P+L++LT
Sbjct: 382 IQTLARLDKGIPRMSAYNMLIARLCKLDRIQESLHIVHIMADEQYGLSTCSFHPILSSLT 441

Query: 459 RKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKAVEV 596
           +K++++++W V+E MR   V  D+TA+N++L  +C+ G++  A +V
Sbjct: 442 QKKKMEDSWKVIEMMRAIGVLPDLTAFNYLLTAYCYNGNLVDACKV 487


>ref|XP_002879856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325695|gb|EFH56115.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 338

 Score =  154 bits (390), Expect = 8e-36
 Identities = 78/159 (49%), Positives = 111/159 (69%)
 Frame = +3

Query: 120 YDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDLVHIICKV 299
           +DKLI+EAG S D  T+ RLLN R   G FNTS+TFKFLT T   +++ L+D+  ++ ++
Sbjct: 42  FDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSETFKFLTNT-VSYSSALEDIRRVLPQI 100

Query: 300 DKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLTRKRRIDE 479
           D GF+RKNA+D LI+ LCK   +N+++ VI  M    + +   TF P+L +LTRK +IDE
Sbjct: 101 DGGFSRKNAYDILISRLCKLGRINDALIVIGDMSNGRLSLTPSTFHPILCSLTRKNKIDE 160

Query: 480 AWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKAVEV 596
           AW VVE MR  +V +D+TAYN+ L  HC++G+M+ A EV
Sbjct: 161 AWRVVESMRSKSVPMDVTAYNYFLTSHCYDGEMESASEV 199