BLASTX nr result
ID: Coptis24_contig00026088
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026088 (216 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ... 129 2e-28 sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom... 129 2e-28 ref|XP_003574752.1| PREDICTED: translation factor GUF1 homolog, ... 127 9e-28 ref|XP_002453333.1| hypothetical protein SORBIDRAFT_04g003970 [S... 127 1e-27 dbj|BAJ85498.1| predicted protein [Hordeum vulgare subsp. vulgar... 125 4e-27 >ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis vinifera] gi|296082645|emb|CBI21650.3| unnamed protein product [Vitis vinifera] Length = 680 Score = 129 bits (324), Expect = 2e-28 Identities = 59/71 (83%), Positives = 68/71 (95%) Frame = +3 Query: 3 LIGLDCSEAIYCSAKEGIGINEILDAIVKKVPPPPDTADNPLRALIFDSYYDPYRGVIVY 182 ++GLDCS+AI+CSAKEGIGI EIL+AIVK++PPP DTA+ PLRALIFDSYYDPYRGVIVY Sbjct: 230 VVGLDCSDAIHCSAKEGIGITEILNAIVKRIPPPCDTAERPLRALIFDSYYDPYRGVIVY 289 Query: 183 FRVIDGTIRKG 215 FRVIDGTI+KG Sbjct: 290 FRVIDGTIKKG 300 >sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic; AltName: Full=Elongation factor 4 homolog; Short=EF-4; AltName: Full=GTPase GUF1 homolog; AltName: Full=Ribosomal back-translocase; Flags: Precursor gi|147841933|emb|CAN60938.1| hypothetical protein VITISV_013255 [Vitis vinifera] Length = 680 Score = 129 bits (324), Expect = 2e-28 Identities = 59/71 (83%), Positives = 68/71 (95%) Frame = +3 Query: 3 LIGLDCSEAIYCSAKEGIGINEILDAIVKKVPPPPDTADNPLRALIFDSYYDPYRGVIVY 182 ++GLDCS+AI+CSAKEGIGI EIL+AIVK++PPP DTA+ PLRALIFDSYYDPYRGVIVY Sbjct: 230 VVGLDCSDAIHCSAKEGIGITEILNAIVKRIPPPCDTAERPLRALIFDSYYDPYRGVIVY 289 Query: 183 FRVIDGTIRKG 215 FRVIDGTI+KG Sbjct: 290 FRVIDGTIKKG 300 >ref|XP_003574752.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like [Brachypodium distachyon] Length = 669 Score = 127 bits (319), Expect = 9e-28 Identities = 61/71 (85%), Positives = 64/71 (90%) Frame = +3 Query: 3 LIGLDCSEAIYCSAKEGIGINEILDAIVKKVPPPPDTADNPLRALIFDSYYDPYRGVIVY 182 +IGLDCS AI CSAKEGIGI EILDAIV KVPPP DT NPLRALIFDSYYDPYRGVIVY Sbjct: 219 IIGLDCSNAIRCSAKEGIGITEILDAIVTKVPPPQDTLKNPLRALIFDSYYDPYRGVIVY 278 Query: 183 FRVIDGTIRKG 215 FRVIDG+I+KG Sbjct: 279 FRVIDGSIKKG 289 >ref|XP_002453333.1| hypothetical protein SORBIDRAFT_04g003970 [Sorghum bicolor] gi|241933164|gb|EES06309.1| hypothetical protein SORBIDRAFT_04g003970 [Sorghum bicolor] Length = 562 Score = 127 bits (318), Expect = 1e-27 Identities = 59/71 (83%), Positives = 66/71 (92%) Frame = +3 Query: 3 LIGLDCSEAIYCSAKEGIGINEILDAIVKKVPPPPDTADNPLRALIFDSYYDPYRGVIVY 182 +IGLDCS+AI CSAKEGIGI EILDA+V K+PPP DTA +PLRALIFDSYYDPYRGVIVY Sbjct: 114 IIGLDCSDAIRCSAKEGIGITEILDALVTKIPPPKDTAKDPLRALIFDSYYDPYRGVIVY 173 Query: 183 FRVIDGTIRKG 215 FRVIDG+I+KG Sbjct: 174 FRVIDGSIKKG 184 >dbj|BAJ85498.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326524185|dbj|BAJ97103.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 672 Score = 125 bits (314), Expect = 4e-27 Identities = 61/71 (85%), Positives = 63/71 (88%) Frame = +3 Query: 3 LIGLDCSEAIYCSAKEGIGINEILDAIVKKVPPPPDTADNPLRALIFDSYYDPYRGVIVY 182 +IGLDCS AI CSAKEGIGI EILDAIV KVPPP DT NPLRALIFDSYYD YRGVIVY Sbjct: 222 IIGLDCSNAIRCSAKEGIGITEILDAIVTKVPPPKDTLKNPLRALIFDSYYDAYRGVIVY 281 Query: 183 FRVIDGTIRKG 215 FRVIDG+IRKG Sbjct: 282 FRVIDGSIRKG 292