BLASTX nr result

ID: Coptis24_contig00026083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026083
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001159341.1| uncharacterized protein LOC100304435 [Zea ma...   197   6e-49
ref|NP_001048471.1| Os02g0810500 [Oryza sativa Japonica Group] g...   197   8e-49
ref|XP_002272358.2| PREDICTED: TBC1 domain family member 25-like...   194   5e-48
emb|CBI37143.3| unnamed protein product [Vitis vinifera]              194   5e-48
ref|XP_002522862.1| conserved hypothetical protein [Ricinus comm...   194   6e-48

>ref|NP_001159341.1| uncharacterized protein LOC100304435 [Zea mays]
           gi|223943511|gb|ACN25839.1| unknown [Zea mays]
           gi|413939411|gb|AFW73962.1| hypothetical protein
           ZEAMMB73_950849 [Zea mays]
          Length = 429

 Score =  197 bits (502), Expect = 6e-49
 Identities = 87/121 (71%), Positives = 109/121 (90%)
 Frame = -3

Query: 370 IGYCQGMSDLCSPMVILLENEADAFWCFERIMRKVRGNFKSTVDTLGVRSQLSILAKIIK 191
           IGYCQGMSDLCSP+ I+LENEADAFWCFER+MR+VRGNFKST  ++GVR+QL+ L+ I+K
Sbjct: 213 IGYCQGMSDLCSPISIILENEADAFWCFERLMRRVRGNFKSTSTSIGVRAQLTTLSTIMK 272

Query: 190 AIDPKLHQHLEDLDGGEYLFAVRMLMALFRREFSIIDAMYLWEMMWALEYDPDLCSLYAA 11
           ++DPKLH+HLE+LDGGEYLFA RMLM LFRREFS +D MYLWE+MW++EY+P+L S+  +
Sbjct: 273 SVDPKLHEHLENLDGGEYLFAFRMLMVLFRREFSFVDTMYLWELMWSMEYNPNLFSMLES 332

Query: 10  D 8
           D
Sbjct: 333 D 333


>ref|NP_001048471.1| Os02g0810500 [Oryza sativa Japonica Group]
           gi|47847812|dbj|BAD21587.1| putative GTPase activating
           protein [Oryza sativa Japonica Group]
           gi|113538002|dbj|BAF10385.1| Os02g0810500 [Oryza sativa
           Japonica Group] gi|215701154|dbj|BAG92578.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 427

 Score =  197 bits (501), Expect = 8e-49
 Identities = 88/121 (72%), Positives = 108/121 (89%)
 Frame = -3

Query: 370 IGYCQGMSDLCSPMVILLENEADAFWCFERIMRKVRGNFKSTVDTLGVRSQLSILAKIIK 191
           IGYCQGMSDLCSPM ILLE+EADAFWCFER+MR+VRGNF S+  ++GVRSQL+IL+ ++K
Sbjct: 212 IGYCQGMSDLCSPMSILLEHEADAFWCFERLMRRVRGNFVSSSTSIGVRSQLTILSSVMK 271

Query: 190 AIDPKLHQHLEDLDGGEYLFAVRMLMALFRREFSIIDAMYLWEMMWALEYDPDLCSLYAA 11
           A+DPKLH+HLE+LDGGEYLFA RMLM LFRREFS +D MYLWE+MW++EY+P L S+  +
Sbjct: 272 AVDPKLHEHLENLDGGEYLFAFRMLMVLFRREFSFVDTMYLWELMWSMEYNPGLFSMLES 331

Query: 10  D 8
           D
Sbjct: 332 D 332


>ref|XP_002272358.2| PREDICTED: TBC1 domain family member 25-like [Vitis vinifera]
          Length = 451

 Score =  194 bits (494), Expect = 5e-48
 Identities = 85/118 (72%), Positives = 107/118 (90%)
 Frame = -3

Query: 370 IGYCQGMSDLCSPMVILLENEADAFWCFERIMRKVRGNFKSTVDTLGVRSQLSILAKIIK 191
           IGYCQGM+D+CSPMVIL+ENEADAFWCFER MR++R NF+ + +++GV+SQL  L++IIK
Sbjct: 232 IGYCQGMNDICSPMVILIENEADAFWCFERAMRRLRENFRVSTNSIGVQSQLGTLSEIIK 291

Query: 190 AIDPKLHQHLEDLDGGEYLFAVRMLMALFRREFSIIDAMYLWEMMWALEYDPDLCSLY 17
           A+DP+LHQHLEDLDGGEYLFA RMLM LFRREFS +DA+YLWE+MWA+EY+P++ S Y
Sbjct: 292 AVDPQLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSSY 349


>emb|CBI37143.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  194 bits (494), Expect = 5e-48
 Identities = 85/118 (72%), Positives = 107/118 (90%)
 Frame = -3

Query: 370 IGYCQGMSDLCSPMVILLENEADAFWCFERIMRKVRGNFKSTVDTLGVRSQLSILAKIIK 191
           IGYCQGM+D+CSPMVIL+ENEADAFWCFER MR++R NF+ + +++GV+SQL  L++IIK
Sbjct: 267 IGYCQGMNDICSPMVILIENEADAFWCFERAMRRLRENFRVSTNSIGVQSQLGTLSEIIK 326

Query: 190 AIDPKLHQHLEDLDGGEYLFAVRMLMALFRREFSIIDAMYLWEMMWALEYDPDLCSLY 17
           A+DP+LHQHLEDLDGGEYLFA RMLM LFRREFS +DA+YLWE+MWA+EY+P++ S Y
Sbjct: 327 AVDPQLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSSY 384


>ref|XP_002522862.1| conserved hypothetical protein [Ricinus communis]
           gi|223537946|gb|EEF39560.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score =  194 bits (493), Expect = 6e-48
 Identities = 88/118 (74%), Positives = 103/118 (87%)
 Frame = -3

Query: 370 IGYCQGMSDLCSPMVILLENEADAFWCFERIMRKVRGNFKSTVDTLGVRSQLSILAKIIK 191
           +GYCQGMSDLCSPM+ILLE+EADAFWCFER+MR++RGNF+ T  ++GV +QLS LA I +
Sbjct: 196 VGYCQGMSDLCSPMIILLEDEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQ 255

Query: 190 AIDPKLHQHLEDLDGGEYLFAVRMLMALFRREFSIIDAMYLWEMMWALEYDPDLCSLY 17
            IDPKLHQHL+ L GG+YLFA RMLM LFRREFS  D++YLWEMMWALEYDPDL SLY
Sbjct: 256 VIDPKLHQHLDALGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFSLY 313


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