BLASTX nr result
ID: Coptis24_contig00026080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00026080
(754 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77324.1| hypothetical protein VITISV_012650 [Vitis vinifera] 75 3e-30
emb|CAN68590.1| hypothetical protein VITISV_029702 [Vitis vinifera] 74 6e-25
emb|CAN80068.1| hypothetical protein VITISV_019029 [Vitis vinifera] 86 1e-24
emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera] 76 4e-24
gb|AFM35693.1| hypothetical protein, partial [Actinidia chinensis] 79 5e-24
>emb|CAN77324.1| hypothetical protein VITISV_012650 [Vitis vinifera]
Length = 829
Score = 75.1 bits (183), Expect(4) = 3e-30
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +2
Query: 437 AGPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPV 601
AG P RT+ALLE YWP++ D+V+ YV TC+VCQQ+KVE+ +P GLLEPLP+
Sbjct: 623 AGHPEQRRTRALLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQPRGLLEPLPI 677
Score = 48.9 bits (115), Expect(4) = 3e-30
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +1
Query: 172 LNNANQVADALSKSKGGICSIQAPLRVGPCAIAYERGWRRTP--KSFMHLAKEGKTRRFW 345
L +AN VADALS K + S+ + + G G + P KS + LA EGKT+RFW
Sbjct: 531 LGSANHVADALSH-KAELASMTSQPQ-GDIMNLLREGLQHDPVAKSLIALAHEGKTKRFW 588
Query: 346 IKDGL*FAKGNLMVVP 393
+DGL + KG + VP
Sbjct: 589 AEDGLLYTKGKRLYVP 604
Score = 46.2 bits (108), Expect(4) = 3e-30
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
+S++MDFI LPK + SI+VVVDRFSKYA FI +C
Sbjct: 683 DSITMDFIIGLPKSEDNDSIIVVVDRFSKYATFIATLTDC 722
Score = 28.1 bits (61), Expect(4) = 3e-30
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 3 HCLRTWRLTVRNL*SMGSKFVVKTEHIATSAQKKLSPA 116
H LRTWR + +GS F+VKT++ + + KL A
Sbjct: 502 HYLRTWRHYL-----LGSHFIVKTDNFDYTLEYKLGSA 534
>emb|CAN68590.1| hypothetical protein VITISV_029702 [Vitis vinifera]
Length = 1083
Score = 73.9 bits (180), Expect(3) = 6e-25
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Frame = +2
Query: 95 PKEALTSWQDKLAEFDMVREYKSLAFSIMPTRLQMR*VSRKAEFAAFKRRYE*GLARSHT 274
PK+A WQD LAEFD EYK + + + L SRKAE + +
Sbjct: 602 PKQA--RWQDFLAEFDYTLEYKPESANHVTDTL-----SRKAELTSLTSQ---------- 644
Query: 275 RGVGEGPPRASCTWPRRARLGDSGSKMDFSSQKEI*WLCRTEGRSL-------MTQ*LLQ 433
P RA +R ++ D L T+GR L ++ L++
Sbjct: 645 ------PLRAHEGKTKRFKVEDG--------------LLYTKGRQLYMPKWGNISHNLIK 684
Query: 434 GA------GPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPL 595
G PG RT+ALL+ WP + D+V+ Y+ TC+VCQ++KVE+ +P GLLEPL
Sbjct: 685 ECHDTKWIGHPGQRRTRALLKSAYTWPLIWDEVEAYMRTCLVCQRDKVEQQQPRGLLEPL 744
Query: 596 PV 601
P+
Sbjct: 745 PI 746
Score = 53.1 bits (126), Expect(3) = 6e-25
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +3
Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
ES++MDFI LPK +GSI+VVVDRFSKYA FI A +C
Sbjct: 752 ESITMDFIIGLPKSEGYGSIIVVVDRFSKYATFITAATDC 791
Score = 33.5 bits (75), Expect(3) = 6e-25
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +3
Query: 3 HCLRTWRLTVRNL*SMGSKFVVKTEHIATS---AQKKLSP 113
H L TWR + +GS F+VKT+++ATS QKKL+P
Sbjct: 568 HSLCTWRHYL-----LGSHFIVKTDNVATSYFQTQKKLNP 602
>emb|CAN80068.1| hypothetical protein VITISV_019029 [Vitis vinifera]
Length = 943
Score = 85.9 bits (211), Expect(2) = 1e-24
Identities = 59/164 (35%), Positives = 78/164 (47%)
Frame = +2
Query: 110 TSWQDKLAEFDMVREYKSLAFSIMPTRLQMR*VSRKAEFAAFKRRYE*GLARSHTRGVGE 289
T WQD LAEFD EYK + + + L SRKAE A+ + + + G+
Sbjct: 293 TRWQDFLAEFDYTLEYKPGSANHVADAL-----SRKAELASMTSQPQGDIVDLLREGLQH 347
Query: 290 GPPRASCTWPRRARLGDSGSKMDFSSQKEI*WLCRTEGRSLMTQ*LLQGAGPPGMHRTQA 469
P S L G F W+ G PG RT+A
Sbjct: 348 DPVAKSLI-----ALAHEGKTKRF-------WV-----------------GHPGQRRTRA 378
Query: 470 LLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPV 601
LLE YWP++ D+V+ YV TC+VCQQ+KVE+ +P GLLEPLP+
Sbjct: 379 LLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQPRGLLEPLPI 422
Score = 53.9 bits (128), Expect(2) = 1e-24
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3
Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
+S++MDFI LPK + GSI+VVVDRFSKYA FI AP +C
Sbjct: 428 DSVTMDFIIGLPKSEDNGSIIVVVDRFSKYATFIAAPTDC 467
>emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera]
Length = 1453
Score = 75.9 bits (185), Expect(2) = 4e-24
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +2
Query: 437 AGPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPVP 604
AG PG RT ALL R YWPKM ++V YV TC+VCQ +K ER K GLL+PLP+P
Sbjct: 1059 AGHPGEERTLALLARSYYWPKMGEEVQAYVKTCLVCQMDKTERKKAAGLLQPLPIP 1114
Score = 62.0 bits (149), Expect(2) = 4e-24
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +3
Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
ES+SMDFIS PKV +F S+ VVVDRFSKYA FIPAP C
Sbjct: 1119 ESISMDFISGFPKVRDFKSVFVVVDRFSKYAVFIPAPDTC 1158
>gb|AFM35693.1| hypothetical protein, partial [Actinidia chinensis]
Length = 167
Score = 79.0 bits (193), Expect(2) = 5e-24
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +2
Query: 437 AGPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPVP 604
AG PG RT+ALLE YWP++ DDV+ YV TC+VCQQ+KVE+ P GLLEPL P
Sbjct: 45 AGHPGQRRTRALLESAYYWPRLRDDVEAYVRTCLVCQQDKVEQQTPAGLLEPLSTP 100
Score = 58.5 bits (140), Expect(2) = 5e-24
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +3
Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
ES++MDFIS+LPK GSI+VVVDRFSKY FIPAP++C
Sbjct: 105 ESVTMDFISALPKSEGNGSIMVVVDRFSKYGIFIPAPKDC 144