BLASTX nr result

ID: Coptis24_contig00026080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026080
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77324.1| hypothetical protein VITISV_012650 [Vitis vinifera]    75   3e-30
emb|CAN68590.1| hypothetical protein VITISV_029702 [Vitis vinifera]    74   6e-25
emb|CAN80068.1| hypothetical protein VITISV_019029 [Vitis vinifera]    86   1e-24
emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera]    76   4e-24
gb|AFM35693.1| hypothetical protein, partial [Actinidia chinensis]     79   5e-24

>emb|CAN77324.1| hypothetical protein VITISV_012650 [Vitis vinifera]
          Length = 829

 Score = 75.1 bits (183), Expect(4) = 3e-30
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +2

Query: 437 AGPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPV 601
           AG P   RT+ALLE   YWP++ D+V+ YV TC+VCQQ+KVE+ +P GLLEPLP+
Sbjct: 623 AGHPEQRRTRALLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQPRGLLEPLPI 677



 Score = 48.9 bits (115), Expect(4) = 3e-30
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = +1

Query: 172 LNNANQVADALSKSKGGICSIQAPLRVGPCAIAYERGWRRTP--KSFMHLAKEGKTRRFW 345
           L +AN VADALS  K  + S+ +  + G        G +  P  KS + LA EGKT+RFW
Sbjct: 531 LGSANHVADALSH-KAELASMTSQPQ-GDIMNLLREGLQHDPVAKSLIALAHEGKTKRFW 588

Query: 346 IKDGL*FAKGNLMVVP 393
            +DGL + KG  + VP
Sbjct: 589 AEDGLLYTKGKRLYVP 604



 Score = 46.2 bits (108), Expect(4) = 3e-30
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +3

Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
           +S++MDFI  LPK  +  SI+VVVDRFSKYA FI    +C
Sbjct: 683 DSITMDFIIGLPKSEDNDSIIVVVDRFSKYATFIATLTDC 722



 Score = 28.1 bits (61), Expect(4) = 3e-30
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 3   HCLRTWRLTVRNL*SMGSKFVVKTEHIATSAQKKLSPA 116
           H LRTWR  +     +GS F+VKT++   + + KL  A
Sbjct: 502 HYLRTWRHYL-----LGSHFIVKTDNFDYTLEYKLGSA 534


>emb|CAN68590.1| hypothetical protein VITISV_029702 [Vitis vinifera]
          Length = 1083

 Score = 73.9 bits (180), Expect(3) = 6e-25
 Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
 Frame = +2

Query: 95   PKEALTSWQDKLAEFDMVREYKSLAFSIMPTRLQMR*VSRKAEFAAFKRRYE*GLARSHT 274
            PK+A   WQD LAEFD   EYK  + + +   L     SRKAE  +   +          
Sbjct: 602  PKQA--RWQDFLAEFDYTLEYKPESANHVTDTL-----SRKAELTSLTSQ---------- 644

Query: 275  RGVGEGPPRASCTWPRRARLGDSGSKMDFSSQKEI*WLCRTEGRSL-------MTQ*LLQ 433
                  P RA     +R ++ D               L  T+GR L       ++  L++
Sbjct: 645  ------PLRAHEGKTKRFKVEDG--------------LLYTKGRQLYMPKWGNISHNLIK 684

Query: 434  GA------GPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPL 595
                    G PG  RT+ALL+    WP + D+V+ Y+ TC+VCQ++KVE+ +P GLLEPL
Sbjct: 685  ECHDTKWIGHPGQRRTRALLKSAYTWPLIWDEVEAYMRTCLVCQRDKVEQQQPRGLLEPL 744

Query: 596  PV 601
            P+
Sbjct: 745  PI 746



 Score = 53.1 bits (126), Expect(3) = 6e-25
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +3

Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
           ES++MDFI  LPK   +GSI+VVVDRFSKYA FI A  +C
Sbjct: 752 ESITMDFIIGLPKSEGYGSIIVVVDRFSKYATFITAATDC 791



 Score = 33.5 bits (75), Expect(3) = 6e-25
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = +3

Query: 3   HCLRTWRLTVRNL*SMGSKFVVKTEHIATS---AQKKLSP 113
           H L TWR  +     +GS F+VKT+++ATS    QKKL+P
Sbjct: 568 HSLCTWRHYL-----LGSHFIVKTDNVATSYFQTQKKLNP 602


>emb|CAN80068.1| hypothetical protein VITISV_019029 [Vitis vinifera]
          Length = 943

 Score = 85.9 bits (211), Expect(2) = 1e-24
 Identities = 59/164 (35%), Positives = 78/164 (47%)
 Frame = +2

Query: 110 TSWQDKLAEFDMVREYKSLAFSIMPTRLQMR*VSRKAEFAAFKRRYE*GLARSHTRGVGE 289
           T WQD LAEFD   EYK  + + +   L     SRKAE A+   + +  +      G+  
Sbjct: 293 TRWQDFLAEFDYTLEYKPGSANHVADAL-----SRKAELASMTSQPQGDIVDLLREGLQH 347

Query: 290 GPPRASCTWPRRARLGDSGSKMDFSSQKEI*WLCRTEGRSLMTQ*LLQGAGPPGMHRTQA 469
            P   S        L   G    F       W+                 G PG  RT+A
Sbjct: 348 DPVAKSLI-----ALAHEGKTKRF-------WV-----------------GHPGQRRTRA 378

Query: 470 LLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPV 601
           LLE   YWP++ D+V+ YV TC+VCQQ+KVE+ +P GLLEPLP+
Sbjct: 379 LLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQPRGLLEPLPI 422



 Score = 53.9 bits (128), Expect(2) = 1e-24
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +3

Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
           +S++MDFI  LPK  + GSI+VVVDRFSKYA FI AP +C
Sbjct: 428 DSVTMDFIIGLPKSEDNGSIIVVVDRFSKYATFIAAPTDC 467


>emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera]
          Length = 1453

 Score = 75.9 bits (185), Expect(2) = 4e-24
 Identities = 34/56 (60%), Positives = 40/56 (71%)
 Frame = +2

Query: 437  AGPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPVP 604
            AG PG  RT ALL R  YWPKM ++V  YV TC+VCQ +K ER K  GLL+PLP+P
Sbjct: 1059 AGHPGEERTLALLARSYYWPKMGEEVQAYVKTCLVCQMDKTERKKAAGLLQPLPIP 1114



 Score = 62.0 bits (149), Expect(2) = 4e-24
 Identities = 29/40 (72%), Positives = 32/40 (80%)
 Frame = +3

Query: 633  ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
            ES+SMDFIS  PKV +F S+ VVVDRFSKYA FIPAP  C
Sbjct: 1119 ESISMDFISGFPKVRDFKSVFVVVDRFSKYAVFIPAPDTC 1158


>gb|AFM35693.1| hypothetical protein, partial [Actinidia chinensis]
          Length = 167

 Score = 79.0 bits (193), Expect(2) = 5e-24
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = +2

Query: 437 AGPPGMHRTQALLERGSYWPKMIDDVDEYVSTCVVCQQNKVERAKPIGLLEPLPVP 604
           AG PG  RT+ALLE   YWP++ DDV+ YV TC+VCQQ+KVE+  P GLLEPL  P
Sbjct: 45  AGHPGQRRTRALLESAYYWPRLRDDVEAYVRTCLVCQQDKVEQQTPAGLLEPLSTP 100



 Score = 58.5 bits (140), Expect(2) = 5e-24
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +3

Query: 633 ESLSMDFISSLPKVGEFGSILVVVDRFSKYA*FIPAPQNC 752
           ES++MDFIS+LPK    GSI+VVVDRFSKY  FIPAP++C
Sbjct: 105 ESVTMDFISALPKSEGNGSIMVVVDRFSKYGIFIPAPKDC 144


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