BLASTX nr result

ID: Coptis24_contig00026063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026063
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267701.2| PREDICTED: uncharacterized protein LOC100257...   385   e-105
emb|CBI34121.3| unnamed protein product [Vitis vinifera]              385   e-105
ref|XP_002323361.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_002524103.1| conserved hypothetical protein [Ricinus comm...   354   2e-95
ref|XP_002308339.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91

>ref|XP_002267701.2| PREDICTED: uncharacterized protein LOC100257121 [Vitis vinifera]
          Length = 770

 Score =  385 bits (989), Expect = e-105
 Identities = 193/309 (62%), Positives = 239/309 (77%)
 Frame = +3

Query: 3    DFLSKRQNVWEDSFQNLYYMLRKDMCNIFYVCTPQFVVMFTGGDYTDKTKRICNAYVSQP 182
            DFL KRQ  WEDSF++LYYMLRK++CNIFYVCT QFVV+F GGD +   K+ CNAY+SQ 
Sbjct: 463  DFLIKRQLAWEDSFRSLYYMLRKNICNIFYVCTSQFVVVFAGGDGSGGKKQSCNAYISQS 522

Query: 183  TRGLRSLLREHDISFSMPLCHSEAEHTSAEDLVELSEIEKGCLGQIRRSDSISDVKDHSP 362
            TRGLRSLLREHD+ FSMPLCHS+ E  + EDLVELSEIEK  LGQ RR  SISDV D+SP
Sbjct: 523  TRGLRSLLREHDVCFSMPLCHSKVEQATTEDLVELSEIEKCNLGQTRRLGSISDV-DNSP 581

Query: 363  QSLLAFSGNESVHGLYDFLLNYRSFLNLLIGGDVPVLCAPVPFLNASISAPEVKCKEIKR 542
            QSLL+FSGN++VH LYDF+LNYRSFL  L   DVP+L +PVPF NA++SAPEV C+E+KR
Sbjct: 582  QSLLSFSGNKNVHALYDFMLNYRSFLTSLTSVDVPLLYSPVPFQNAALSAPEVSCRELKR 641

Query: 543  ASSLPSLPKGSHLEEESTNDLSGGVCHSIEITDTILPPWIISGICASLGSEGRSFEASFT 722
            A  +    KGS +++E+   +S G+ +SIEI D  +PPWIIS ICA++GSEGRSFEASFT
Sbjct: 642  ADHVAFPLKGSKMKDEAIESVSAGLSYSIEIKDAYIPPWIISSICATMGSEGRSFEASFT 701

Query: 723  TEPTSIGLNVALDINSFKSDIEIDSCNGLQESSQTFGITEAVISPCLRLASLRGLKFSND 902
            TEPTSIGLN A++    KSD +  +   +QES+  FG+ EAV++  +  A L+GLK++N 
Sbjct: 702  TEPTSIGLNAAVETVGQKSDTQAATGEAIQESTYAFGVPEAVVTSYMHSAFLKGLKYANG 761

Query: 903  SYKACLMPV 929
            SY A L PV
Sbjct: 762  SYTARLSPV 770


>emb|CBI34121.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score =  385 bits (989), Expect = e-105
 Identities = 193/309 (62%), Positives = 239/309 (77%)
 Frame = +3

Query: 3    DFLSKRQNVWEDSFQNLYYMLRKDMCNIFYVCTPQFVVMFTGGDYTDKTKRICNAYVSQP 182
            DFL KRQ  WEDSF++LYYMLRK++CNIFYVCT QFVV+F GGD +   K+ CNAY+SQ 
Sbjct: 325  DFLIKRQLAWEDSFRSLYYMLRKNICNIFYVCTSQFVVVFAGGDGSGGKKQSCNAYISQS 384

Query: 183  TRGLRSLLREHDISFSMPLCHSEAEHTSAEDLVELSEIEKGCLGQIRRSDSISDVKDHSP 362
            TRGLRSLLREHD+ FSMPLCHS+ E  + EDLVELSEIEK  LGQ RR  SISDV D+SP
Sbjct: 385  TRGLRSLLREHDVCFSMPLCHSKVEQATTEDLVELSEIEKCNLGQTRRLGSISDV-DNSP 443

Query: 363  QSLLAFSGNESVHGLYDFLLNYRSFLNLLIGGDVPVLCAPVPFLNASISAPEVKCKEIKR 542
            QSLL+FSGN++VH LYDF+LNYRSFL  L   DVP+L +PVPF NA++SAPEV C+E+KR
Sbjct: 444  QSLLSFSGNKNVHALYDFMLNYRSFLTSLTSVDVPLLYSPVPFQNAALSAPEVSCRELKR 503

Query: 543  ASSLPSLPKGSHLEEESTNDLSGGVCHSIEITDTILPPWIISGICASLGSEGRSFEASFT 722
            A  +    KGS +++E+   +S G+ +SIEI D  +PPWIIS ICA++GSEGRSFEASFT
Sbjct: 504  ADHVAFPLKGSKMKDEAIESVSAGLSYSIEIKDAYIPPWIISSICATMGSEGRSFEASFT 563

Query: 723  TEPTSIGLNVALDINSFKSDIEIDSCNGLQESSQTFGITEAVISPCLRLASLRGLKFSND 902
            TEPTSIGLN A++    KSD +  +   +QES+  FG+ EAV++  +  A L+GLK++N 
Sbjct: 564  TEPTSIGLNAAVETVGQKSDTQAATGEAIQESTYAFGVPEAVVTSYMHSAFLKGLKYANG 623

Query: 903  SYKACLMPV 929
            SY A L PV
Sbjct: 624  SYTARLSPV 632


>ref|XP_002323361.1| predicted protein [Populus trichocarpa] gi|222867991|gb|EEF05122.1|
            predicted protein [Populus trichocarpa]
          Length = 630

 Score =  372 bits (954), Expect = e-100
 Identities = 193/310 (62%), Positives = 236/310 (76%), Gaps = 1/310 (0%)
 Frame = +3

Query: 3    DFLSKRQNVWEDSFQNLYYMLRKDMCNIFYVCTPQFVVMFTGGDYTDKTKRICNAYVSQP 182
            DFL KRQ  WEDSF++LYYMLRK++CNIFYVCT QFVVMFTG D +  TK +CNAY+SQ 
Sbjct: 323  DFLRKRQLAWEDSFRSLYYMLRKNICNIFYVCTSQFVVMFTGSDGSGCTKHLCNAYISQS 382

Query: 183  TRGLRSLLREHDISFSMPLCHSEAEHTSAEDLVELSEIEKGCLGQIRRSDSISDVKDHSP 362
            TRGLRSLLREHD+ FSMPLC+S+ E  + EDLVELSEIEK  LGQ RR  S+SDV D+SP
Sbjct: 383  TRGLRSLLREHDVCFSMPLCYSKVEQVTTEDLVELSEIEKQNLGQTRRLSSLSDV-DNSP 441

Query: 363  QSLLAFSGNESVHGLYDFLLNYRSFLNLLIGGDVPVLCAPVPFLNASISAPEVKCKEIKR 542
            QSL+AF GN++V+GLYDFLLNYRS L  L G DVPVL +PVPF NA++S+PE+KC E+KR
Sbjct: 442  QSLMAFCGNKNVNGLYDFLLNYRSSLTFLSGVDVPVLYSPVPFQNAALSSPEIKCVEVKR 501

Query: 543  ASSLPSLPKGSHLEE-ESTNDLSGGVCHSIEITDTILPPWIISGICASLGSEGRSFEASF 719
            A  + + PK S +++ ES+   S G+  SIEI D  +P WI+  +CA + S+GRSFEASF
Sbjct: 502  AHHIAASPKESTVKDTESSQGSSTGLLSSIEIKDAYIPSWIVCRVCALMDSDGRSFEASF 561

Query: 720  TTEPTSIGLNVALDINSFKSDIEIDSCNGLQESSQTFGITEAVISPCLRLASLRGLKFSN 899
            TTE TSIGLNVAL+    K D +     G QESS +FGI EA ++PCLR   L+GLK+S+
Sbjct: 562  TTERTSIGLNVALETACEKPD-QAAVVEGSQESSHSFGIPEASVAPCLRSGFLKGLKYSD 620

Query: 900  DSYKACLMPV 929
             SY A L PV
Sbjct: 621  GSYVASLSPV 630


>ref|XP_002524103.1| conserved hypothetical protein [Ricinus communis]
            gi|223536671|gb|EEF38313.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 644

 Score =  354 bits (909), Expect = 2e-95
 Identities = 186/310 (60%), Positives = 226/310 (72%), Gaps = 1/310 (0%)
 Frame = +3

Query: 3    DFLSKRQNVWEDSFQNLYYMLRKDMCNIFYVCTPQFVVMFTGGDYTDKTKRICNAYVSQP 182
            DFL KRQ  WEDSF++LYYMLRK++CNIFYVCT  FVVMF     +  TK  CNAY+SQ 
Sbjct: 336  DFLRKRQLGWEDSFRSLYYMLRKNICNIFYVCTSHFVVMFICSSGSGGTKHSCNAYISQS 395

Query: 183  TRGLRSLLREHDISFSMPLCHSEAEHTSAEDLVELSEIEKGCLGQIRRSDSISDVKDHSP 362
            TR LRSLL+EHD+ FSMPLCHS+ E  + EDLVELSEIEK  LGQ RR  S SDV D+SP
Sbjct: 396  TRRLRSLLKEHDVCFSMPLCHSKEEQATTEDLVELSEIEKQNLGQTRRRTSSSDV-DNSP 454

Query: 363  QSLLAFSGNESVHGLYDFLLNYRSFLNLLIGGDVPVLCAPVPFLNASISAPEVKCKEIKR 542
            +SLLAF GN+ VH LYDFLLNYRS L +L G DVPVL +PVPF N+++SAPE++C E+KR
Sbjct: 455  ESLLAFCGNKGVHALYDFLLNYRSSLTVLSGVDVPVLYSPVPFQNSALSAPEIRCVEMKR 514

Query: 543  ASSLPSLPKGSHLEE-ESTNDLSGGVCHSIEITDTILPPWIISGICASLGSEGRSFEASF 719
            A  + +  K S +++ ES    S G+  SIEI D  +P WII  +CA +GSEG SFEASF
Sbjct: 515  ADHIAASAKESKIKDSESLQGSSSGLRSSIEIKDAFIPSWIICRVCALMGSEGNSFEASF 574

Query: 720  TTEPTSIGLNVALDINSFKSDIEIDSCNGLQESSQTFGITEAVISPCLRLASLRGLKFSN 899
             TE TSIGLN+AL   S KSD +  +  GLQESSQ FGI EA ++PCL    L+GLK+++
Sbjct: 575  ITERTSIGLNIALQTLSEKSDSKDVTSKGLQESSQCFGIPEATMTPCLGSGFLKGLKYTD 634

Query: 900  DSYKACLMPV 929
              Y A L P+
Sbjct: 635  GYYTASLSPI 644


>ref|XP_002308339.1| predicted protein [Populus trichocarpa] gi|222854315|gb|EEE91862.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  342 bits (876), Expect = 1e-91
 Identities = 183/308 (59%), Positives = 215/308 (69%)
 Frame = +3

Query: 3    DFLSKRQNVWEDSFQNLYYMLRKDMCNIFYVCTPQFVVMFTGGDYTDKTKRICNAYVSQP 182
            DF+ KRQ  WEDSF++LYYMLRK++CNIFYVCT QFVVMFT  D   +T  +CNAY+SQ 
Sbjct: 291  DFIRKRQLAWEDSFRSLYYMLRKNICNIFYVCTSQFVVMFTNSDGPGRTAHLCNAYISQS 350

Query: 183  TRGLRSLLREHDISFSMPLCHSEAEHTSAEDLVELSEIEKGCLGQIRRSDSISDVKDHSP 362
            TRGLRSLLREHDI FSMPLCHS+ E  + EDLVELSEIEK  LGQ RR  S+SDV D+SP
Sbjct: 351  TRGLRSLLREHDICFSMPLCHSKVEQVTTEDLVELSEIEKQNLGQTRRLSSLSDV-DNSP 409

Query: 363  QSLLAFSGNESVHGLYDFLLNYRSFLNLLIGGDVPVLCAPVPFLNASISAPEVKCKEIKR 542
            QSLLAF GN++VHGLYDFLLNYRS L  L G DVPVL +PVPF NA++SAPE        
Sbjct: 410  QSLLAFCGNKNVHGLYDFLLNYRSSLTFLSGVDVPVLYSPVPFQNAALSAPE-------- 461

Query: 543  ASSLPSLPKGSHLEEESTNDLSGGVCHSIEITDTILPPWIISGICASLGSEGRSFEASFT 722
                            S ND+   +   IEI D  +PPWI+  +CA +GSEGR+FEASFT
Sbjct: 462  -------------NTSSKNDIYSCLM-IIEIKDACIPPWIVCRVCALMGSEGRNFEASFT 507

Query: 723  TEPTSIGLNVALDINSFKSDIEIDSCNGLQESSQTFGITEAVISPCLRLASLRGLKFSND 902
            TE TSIGLN AL+    K D +  +  GLQESS  FGI EA ++PCL    L+GLK+ + 
Sbjct: 508  TERTSIGLNAALETACEKPD-QAAAVEGLQESSHAFGIPEATVAPCLGSGFLKGLKYCDG 566

Query: 903  SYKACLMP 926
            SY A L P
Sbjct: 567  SYTASLSP 574


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