BLASTX nr result

ID: Coptis24_contig00026059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026059
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252...    74   6e-11
ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783...    70   6e-10
ref|XP_003535997.1| PREDICTED: uncharacterized protein LOC100806...    70   1e-09
gb|AFK34388.1| unknown [Lotus japonicus]                               65   3e-08
ref|XP_002312595.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08

>ref|XP_002285431.1| PREDICTED: uncharacterized protein LOC100252766 [Vitis vinifera]
           gi|296083714|emb|CBI23703.3| unnamed protein product
           [Vitis vinifera]
          Length = 92

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 35/60 (58%), Positives = 42/60 (70%)
 Frame = -1

Query: 600 SNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEPXXXXXXXXXXXXSCICNIM 421
           SN+LL  RRGG+S+R  K+RRKVQWNDR GNKLVE+LEF+P            SCIC +M
Sbjct: 33  SNSLLPPRRGGMSRRQDKVRRKVQWNDRNGNKLVEVLEFQPSDVSDTDDEESDSCICTLM 92


>ref|XP_003555752.1| PREDICTED: uncharacterized protein LOC100783330 [Glycine max]
          Length = 98

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 34/60 (56%), Positives = 40/60 (66%)
 Frame = -1

Query: 600 SNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEPXXXXXXXXXXXXSCICNIM 421
           SN+LL  RRGG+S+  +K RRKVQWNDR GNKL E+LE+EP            SCIC IM
Sbjct: 39  SNSLLPPRRGGMSRNCEKTRRKVQWNDRNGNKLAEVLEYEPSDVSDSEDEDSDSCICTIM 98


>ref|XP_003535997.1| PREDICTED: uncharacterized protein LOC100806080 isoform 1 [Glycine
           max]
          Length = 98

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 34/60 (56%), Positives = 40/60 (66%)
 Frame = -1

Query: 600 SNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEPXXXXXXXXXXXXSCICNIM 421
           SN+LL  RRGG+S+  +K RRKVQWNDR GNKL E+LE+EP            SCIC IM
Sbjct: 39  SNSLLPPRRGGMSRNCEKTRRKVQWNDRNGNKLAEVLEYEPSDVSDSEDEDSDSCICAIM 98


>gb|AFK34388.1| unknown [Lotus japonicus]
          Length = 107

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -1

Query: 600 SNALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEP-XXXXXXXXXXXXSCICNI 424
           SN+LL  RRGG+S+   K R KVQWNDR GNKLVE+LE+EP             SCIC I
Sbjct: 47  SNSLLPPRRGGMSRNSDKTRLKVQWNDRNGNKLVEVLEYEPSDVSDSDDDEDSDSCICTI 106

Query: 423 M 421
           M
Sbjct: 107 M 107


>ref|XP_002312595.1| predicted protein [Populus trichocarpa] gi|222852415|gb|EEE89962.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -1

Query: 594 ALLSTRRGGISKRPKKLRRKVQWNDRTGNKLVEILEFEP 478
           ALL  R+GG+S+ P K+RRKVQWND  GNKLVEILEFEP
Sbjct: 42  ALLPPRKGGMSRSPNKVRRKVQWNDNNGNKLVEILEFEP 80


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