BLASTX nr result

ID: Coptis24_contig00026058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026058
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316338.1| predicted protein [Populus trichocarpa] gi|2...    58   8e-12
ref|XP_003543468.1| PREDICTED: uncharacterized protein YKR070W-l...    54   4e-11
ref|XP_002281784.2| PREDICTED: uncharacterized protein YKR070W-l...    50   2e-10
gb|AFK47918.1| unknown [Medicago truncatula]                           50   2e-09
ref|XP_003597279.1| Cat eye syndrome critical region protein [Me...    50   2e-09

>ref|XP_002316338.1| predicted protein [Populus trichocarpa] gi|222865378|gb|EEF02509.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 57.8 bits (138), Expect(2) = 8e-12
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = -2

Query: 168 RKVRSIDEYASYFDNIDPVAQYKTWVTKSAFREDYCLKLSTLGCDFSSERVKAVFV 1
           +KV S+DEYAS F+NIDP+AQYK W TK           +    D SSE VKAVFV
Sbjct: 151 KKVVSLDEYASCFENIDPLAQYKKWTTKQGLDRSSLTLNTVPRYDVSSETVKAVFV 206



 Score = 37.0 bits (84), Expect(2) = 8e-12
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -3

Query: 281 LIIVVGKGEPAEVMSEYGFK 222
           LI+  GKGEPA VMSEYGFK
Sbjct: 132 LIVATGKGEPAVVMSEYGFK 151


>ref|XP_003543468.1| PREDICTED: uncharacterized protein YKR070W-like [Glycine max]
          Length = 374

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 29/56 (51%), Positives = 35/56 (62%)
 Frame = -2

Query: 168 RKVRSIDEYASYFDNIDPVAQYKTWVTKSAFREDYCLKLSTLGCDFSSERVKAVFV 1
           R V SIDEYAS F+NIDP+A YK W TK A  ++     S    D  S+RV+A FV
Sbjct: 138 RYVLSIDEYASCFENIDPLAPYKKWTTKLAVTQNAKFNESVPRNDVFSKRVQAAFV 193



 Score = 38.9 bits (89), Expect(2) = 4e-11
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -3

Query: 284 DLIIVVGKGEPAEVMSEYGFK 222
           DLI+ VGKGEPA VM+EYGF+
Sbjct: 118 DLIVAVGKGEPAAVMTEYGFR 138


>ref|XP_002281784.2| PREDICTED: uncharacterized protein YKR070W-like [Vitis vinifera]
           gi|297746180|emb|CBI16236.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score = 50.4 bits (119), Expect(2) = 2e-10
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = -2

Query: 168 RKVRSIDEYASYFDNIDPVAQYKTWVTKSAFREDYCLKLSTLGCDFSSERVKAVFV 1
           + V SIDEY+S FDNIDP+A YK W T+    ++  LK+        S+RV+A FV
Sbjct: 147 KNVLSIDEYSSCFDNIDPLAHYKKWSTRQEVDQNSTLKMKN---TVYSQRVQAAFV 199



 Score = 39.7 bits (91), Expect(2) = 2e-10
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = -3

Query: 284 DLIIVVGKGEPAEVMSEYGFK 222
           +L+I VGKGEPA VMSEYGFK
Sbjct: 127 ELVIAVGKGEPAAVMSEYGFK 147


>gb|AFK47918.1| unknown [Medicago truncatula]
          Length = 381

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 27/56 (48%), Positives = 34/56 (60%)
 Frame = -2

Query: 168 RKVRSIDEYASYFDNIDPVAQYKTWVTKSAFREDYCLKLSTLGCDFSSERVKAVFV 1
           + V SID YAS F+NIDP+A YK W TK A  ++     S    D  SERV+A F+
Sbjct: 146 KNVISIDAYASRFENIDPLAPYKKWTTKLATTQNPKFDESGPQIDVFSERVQAAFI 201



 Score = 36.6 bits (83), Expect(2) = 2e-09
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -3

Query: 281 LIIVVGKGEPAEVMSEYGFK 222
           LI+  GKGEPA VMSEYGFK
Sbjct: 127 LIVAAGKGEPALVMSEYGFK 146


>ref|XP_003597279.1| Cat eye syndrome critical region protein [Medicago truncatula]
           gi|355486327|gb|AES67530.1| Cat eye syndrome critical
           region protein [Medicago truncatula]
          Length = 381

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 27/56 (48%), Positives = 34/56 (60%)
 Frame = -2

Query: 168 RKVRSIDEYASYFDNIDPVAQYKTWVTKSAFREDYCLKLSTLGCDFSSERVKAVFV 1
           + V SID YAS F+NIDP+A YK W TK A  ++     S    D  SERV+A F+
Sbjct: 146 KNVISIDAYASRFENIDPLAPYKKWTTKLATTQNPKFDESGPQIDVFSERVQAAFI 201



 Score = 36.6 bits (83), Expect(2) = 2e-09
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -3

Query: 281 LIIVVGKGEPAEVMSEYGFK 222
           LI+  GKGEPA VMSEYGFK
Sbjct: 127 LIVAAGKGEPALVMSEYGFK 146


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