BLASTX nr result

ID: Coptis24_contig00026051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026051
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
emb|CBI26839.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264...   144   6e-33
ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatul...   144   1e-32
ref|XP_002525990.1| protein with unknown function [Ricinus commu...   143   2e-32

>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/86 (81%), Positives = 77/86 (89%)
 Frame = -1

Query: 258 IIRYLSRKDIAVVLGSGCPSIDRKVVNSGKRLRAHVHVDEGKVCSSCSLRGSCERAYVKA 79
           +IRY SRKDI V+ G GCPSIDRKVVNSGKRLRAHV ++EG VCSSC+LRG CERAYVKA
Sbjct: 61  LIRYFSRKDIGVIAGCGCPSIDRKVVNSGKRLRAHVGINEGHVCSSCNLRGDCERAYVKA 120

Query: 78  REEEGGRTVDVMRILLTYGLDPVIGS 1
           RE+EGGRTVDVMRILLTYGLD V G+
Sbjct: 121 REDEGGRTVDVMRILLTYGLDYVSGT 146


>emb|CBI26839.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/87 (79%), Positives = 75/87 (86%)
 Frame = -1

Query: 261 DIIRYLSRKDIAVVLGSGCPSIDRKVVNSGKRLRAHVHVDEGKVCSSCSLRGSCERAYVK 82
           D+I Y SRKDI VV GSGCPS DRKVVNSGKRLRAHV +DEG VCSSC LRG+CERAYV 
Sbjct: 44  DLISYFSRKDIEVVAGSGCPSTDRKVVNSGKRLRAHVDIDEGNVCSSCILRGNCERAYVM 103

Query: 81  AREEEGGRTVDVMRILLTYGLDPVIGS 1
           A E EGGRTVD+MRILLTYGLDP+ G+
Sbjct: 104 ASEGEGGRTVDLMRILLTYGLDPITGT 130


>ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264495 [Vitis vinifera]
          Length = 528

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/87 (79%), Positives = 75/87 (86%)
 Frame = -1

Query: 261 DIIRYLSRKDIAVVLGSGCPSIDRKVVNSGKRLRAHVHVDEGKVCSSCSLRGSCERAYVK 82
           D+I Y SRKDI VV GSGCPS DRKVVNSGKRLRAHV +DEG VCSSC LRG+CERAYV 
Sbjct: 130 DLISYFSRKDIEVVAGSGCPSTDRKVVNSGKRLRAHVDIDEGNVCSSCILRGNCERAYVM 189

Query: 81  AREEEGGRTVDVMRILLTYGLDPVIGS 1
           A E EGGRTVD+MRILLTYGLDP+ G+
Sbjct: 190 ASEGEGGRTVDLMRILLTYGLDPITGT 216


>ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatula]
           gi|355503616|gb|AES84819.1| Zinc finger protein VAR3
           [Medicago truncatula]
          Length = 560

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/86 (76%), Positives = 78/86 (90%)
 Frame = -1

Query: 258 IIRYLSRKDIAVVLGSGCPSIDRKVVNSGKRLRAHVHVDEGKVCSSCSLRGSCERAYVKA 79
           + R+LSRKDI V++  GCPS+DRKVVNSGKRLRA+  +DEG VCSSC+LRG CERA+VKA
Sbjct: 156 LARFLSRKDIGVIVTFGCPSLDRKVVNSGKRLRAYAGIDEGNVCSSCNLRGDCERAFVKA 215

Query: 78  REEEGGRTVDVMRILLTYGLDPVIGS 1
           RE+EGGRTVDVMRI+LTYGLDP+IGS
Sbjct: 216 REDEGGRTVDVMRIILTYGLDPIIGS 241


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/87 (77%), Positives = 75/87 (86%)
 Frame = -1

Query: 261 DIIRYLSRKDIAVVLGSGCPSIDRKVVNSGKRLRAHVHVDEGKVCSSCSLRGSCERAYVK 82
           ++IR  SR+DI ++ G GCPSIDRKVVNSGKRLRAHV +DEG VCSSC LRG CERAYVK
Sbjct: 144 ELIRVFSRRDIHIIAGCGCPSIDRKVVNSGKRLRAHVGIDEGNVCSSCKLRGDCERAYVK 203

Query: 81  AREEEGGRTVDVMRILLTYGLDPVIGS 1
           ARE EGGRTVDVMRILLTYGLD + G+
Sbjct: 204 ARENEGGRTVDVMRILLTYGLDSISGT 230


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