BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026050
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [...    66   3e-09
ref|XP_002305930.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
emb|CBI39592.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -3

Query: 209 FEDMQTPGQSPNIVTDAIFIEGLCANGGLSDAMELIHLMESNGLRANVVIYNSIIHHMCR 30
           F +M+  G SPN+VT A  I  LC  G L+DAME +  M S GL+ N V+Y+S+I   C 
Sbjct: 470 FTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT 529

Query: 29  EGNLLEAKE 3
            G+L++AKE
Sbjct: 530 HGDLIKAKE 538


>ref|XP_002305930.1| predicted protein [Populus trichocarpa] gi|222848894|gb|EEE86441.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/69 (42%), Positives = 44/69 (63%)
 Frame = -3

Query: 209 FEDMQTPGQSPNIVTDAIFIEGLCANGGLSDAMELIHLMESNGLRANVVIYNSIIHHMCR 30
           F++M T G  PN+ T AI ++G C  G L  A  L   M+S  L+ N+V+YN +++ MC+
Sbjct: 313 FKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCK 372

Query: 29  EGNLLEAKE 3
            GNL +A+E
Sbjct: 373 SGNLKDARE 381


>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 209 FEDMQTPGQSPNIVTDAIFIEGLCANGGLSDAMELIHLMESNGLRANVVIYNSIIHHMCR 30
           FE+MQ  G  PN+VT    I GLC+NG L +A+ L   M   GL+ NVV YN++I+  C+
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 29  EGNLLEAKE 3
           +  L EA+E
Sbjct: 382 KKMLKEARE 390


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 209 FEDMQTPGQSPNIVTDAIFIEGLCANGGLSDAMELIHLMESNGLRANVVIYNSIIHHMCR 30
           FE+MQ  G  PN+VT    I GLC+NG L +A+ L   M   GL+ NVV YN++I+  C+
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 29  EGNLLEAKE 3
           +  L EA+E
Sbjct: 382 KKMLKEARE 390


>ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|222835036|gb|EEE73485.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = -3

Query: 209 FEDMQTPGQSPNIVTDAIFIEGLCANGGLSDAMELIHLMESNGLRANVVIYNSIIHHMCR 30
           F+DM   G SP++VT +IF+ GL   G L  A+EL   M++N L  ++VIYN +I  MC+
Sbjct: 133 FKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCK 192

Query: 29  EGNLLEAKE 3
            G L +A+E
Sbjct: 193 SGKLEDARE 201