BLASTX nr result

ID: Coptis24_contig00026046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026046
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17267.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002263268.1| PREDICTED: uncharacterized protein LOC100243...   106   2e-21
ref|XP_003537381.1| PREDICTED: uncharacterized protein LOC100808...   105   5e-21
emb|CBI24027.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002264536.1| PREDICTED: uncharacterized protein LOC100261...   105   5e-21

>emb|CBI17267.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = +2

Query: 26  MAFETLIRPSLISRHPLISSITIRFKTTSAQYVDSRTRDPTYEKLMKSYKNLLKVYSIQD 205
           MA   +I+  L+  HP   S ++RFKTTS QYV SR RDPT+EKLM +YKNLLKV +IQD
Sbjct: 1   MATHHIIKRILL--HP--PSTSVRFKTTSVQYVASRARDPTFEKLMDNYKNLLKVVAIQD 56

Query: 206 LILANPKNPTLPLDILSKLAQKLHLNR 286
           LILANPKNPT+ L  LS L+QKLHLNR
Sbjct: 57  LILANPKNPTVSLQFLSNLSQKLHLNR 83


>ref|XP_002263268.1| PREDICTED: uncharacterized protein LOC100243520 [Vitis vinifera]
          Length = 400

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = +2

Query: 26  MAFETLIRPSLISRHPLISSITIRFKTTSAQYVDSRTRDPTYEKLMKSYKNLLKVYSIQD 205
           MA   +I+  L+  HP   S ++RFKTTS QYV SR RDPT+EKLM +YKNLLKV +IQD
Sbjct: 1   MATHHIIKRILL--HP--PSTSVRFKTTSVQYVASRARDPTFEKLMDNYKNLLKVVAIQD 56

Query: 206 LILANPKNPTLPLDILSKLAQKLHLNR 286
           LILANPKNPT+ L  LS L+QKLHLNR
Sbjct: 57  LILANPKNPTVSLQFLSNLSQKLHLNR 83


>ref|XP_003537381.1| PREDICTED: uncharacterized protein LOC100808404 [Glycine max]
          Length = 402

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = +2

Query: 68  HPLISSITIRFKTTSAQYVDSRTRDPTYEKLMKSYKNLLKVYSIQDLILANPKNPTLPLD 247
           HP   S+ +R KTTSAQYV +R RDPT+EKLM +YKNL+KV ++QDLILANPKNP++ +D
Sbjct: 11  HPTRFSMCLRSKTTSAQYVATRFRDPTFEKLMDNYKNLVKVIAVQDLILANPKNPSVSID 70

Query: 248 ILSKLAQKLHLNR 286
            LSKL+QKLHLNR
Sbjct: 71  FLSKLSQKLHLNR 83


>emb|CBI24027.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +2

Query: 83  SITIRFKTTSAQYVDSRTRDPTYEKLMKSYKNLLKVYSIQDLILANPKNPTLPLDILSKL 262
           S ++RFKTTS QYV SR RDPT+EKLM +YKNLLKV +IQDLILANPKNPT+ L  LS L
Sbjct: 16  STSVRFKTTSVQYVASRARDPTFEKLMDNYKNLLKVIAIQDLILANPKNPTVSLQFLSNL 75

Query: 263 AQKLHLNR 286
           +QKLHLNR
Sbjct: 76  SQKLHLNR 83


>ref|XP_002264536.1| PREDICTED: uncharacterized protein LOC100261573 [Vitis vinifera]
          Length = 400

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +2

Query: 83  SITIRFKTTSAQYVDSRTRDPTYEKLMKSYKNLLKVYSIQDLILANPKNPTLPLDILSKL 262
           S ++RFKTTS QYV SR RDPT+EKLM +YKNLLKV +IQDLILANPKNPT+ L  LS L
Sbjct: 16  STSVRFKTTSVQYVASRARDPTFEKLMDNYKNLLKVIAIQDLILANPKNPTVSLQFLSNL 75

Query: 263 AQKLHLNR 286
           +QKLHLNR
Sbjct: 76  SQKLHLNR 83


Top