BLASTX nr result
ID: Coptis24_contig00026042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00026042
(536 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304347.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-15
ref|XP_002527658.1| trehalose-6-phosphate synthase, putative [Ri... 73 2e-14
gb|AAX16014.1| trehalose-6-phosphate synthase [Ginkgo biloba] gi... 68 8e-14
ref|XP_002277503.2| PREDICTED: alpha,alpha-trehalose-phosphate s... 75 2e-13
emb|CAN61971.1| hypothetical protein VITISV_016593 [Vitis vinifera] 75 2e-13
>ref|XP_002304347.1| predicted protein [Populus trichocarpa] gi|222841779|gb|EEE79326.1|
predicted protein [Populus trichocarpa]
Length = 861
Score = 71.2 bits (173), Expect(2) = 8e-15
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = -3
Query: 282 ENRNSVNSDIPSSISHEHMISVGNQLPLRAHRRSDSDGVWYVSWDEDSVI 133
++ NSV+SD PSS+S E MI VGNQLPLRAHR D G W SWDEDS++
Sbjct: 41 DDENSVSSDAPSSVSQERMIIVGNQLPLRAHRSPDGSGGWCFSWDEDSLL 90
Score = 33.9 bits (76), Expect(2) = 8e-15
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1
Query: 353 NFGRVVKRLPRVMTVAGIIVALGMRTAIVS 264
NFGR KRLPRV TVAGI+ L ++ S
Sbjct: 19 NFGRERKRLPRVATVAGILTDLDDENSVSS 48
>ref|XP_002527658.1| trehalose-6-phosphate synthase, putative [Ricinus communis]
gi|223532963|gb|EEF34729.1| trehalose-6-phosphate
synthase, putative [Ricinus communis]
Length = 814
Score = 73.2 bits (178), Expect(2) = 2e-14
Identities = 34/51 (66%), Positives = 37/51 (72%)
Frame = -3
Query: 285 DENRNSVNSDIPSSISHEHMISVGNQLPLRAHRRSDSDGVWYVSWDEDSVI 133
DEN NSV SD PSS+S E MI VGNQLPLRAHR D W SWDEDS++
Sbjct: 42 DENSNSVGSDAPSSVSQERMIIVGNQLPLRAHRSPDGSEEWCFSWDEDSLL 92
Score = 30.4 bits (67), Expect(2) = 2e-14
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 350 FGRVVKRLPRVMTVAGIIVAL 288
FGR KRLPRV TVAG++ L
Sbjct: 20 FGREKKRLPRVATVAGVLSEL 40
>gb|AAX16014.1| trehalose-6-phosphate synthase [Ginkgo biloba]
gi|60265773|gb|AAX16015.1| trehalose-6-phosphate
synthase [Ginkgo biloba]
Length = 868
Score = 68.2 bits (165), Expect(2) = 8e-14
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = -3
Query: 285 DENRNSVNSDIPSSISHEHMISVGNQLPLRAHRRSDSDGVWYVSWDEDSVI 133
D+N NSV+SD+PSSI E MI V NQLPLRA RR D+ G W SWDEDS++
Sbjct: 42 DDNSNSVSSDVPSSICQERMIIVANQLPLRAQRRPDNRG-WAFSWDEDSLL 91
Score = 33.5 bits (75), Expect(2) = 8e-14
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1
Query: 350 FGRVVKRLPRVMTVAGIIVAL 288
FGR KRLPRVMTV GII L
Sbjct: 20 FGRATKRLPRVMTVPGIISEL 40
>ref|XP_002277503.2| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming]
5-like [Vitis vinifera]
Length = 864
Score = 74.7 bits (182), Expect(2) = 2e-13
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = -3
Query: 285 DENRNSVNSDIPSSISHEHMISVGNQLPLRAHRRSDSDGVWYVSWDEDSVI 133
DE NSV SD PSS+S + MI VGNQLPLRAHR SD G W SWDEDS++
Sbjct: 42 DETSNSVTSDAPSSVSQDRMIIVGNQLPLRAHRSSDGSGEWCFSWDEDSLL 92
Score = 25.4 bits (54), Expect(2) = 2e-13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 350 FGRVVKRLPRVMTVAGIIVALGMRTA 273
FGR K++ RV TVAG++ L T+
Sbjct: 20 FGRGGKKISRVATVAGVLSELDDETS 45
>emb|CAN61971.1| hypothetical protein VITISV_016593 [Vitis vinifera]
Length = 859
Score = 74.7 bits (182), Expect(2) = 2e-13
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = -3
Query: 285 DENRNSVNSDIPSSISHEHMISVGNQLPLRAHRRSDSDGVWYVSWDEDSVI 133
DE NSV SD PSS+S + MI VGNQLPLRAHR SD G W SWDEDS++
Sbjct: 42 DETSNSVTSDAPSSVSQDRMIIVGNQLPLRAHRSSDGSGEWCFSWDEDSLL 92
Score = 25.4 bits (54), Expect(2) = 2e-13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 350 FGRVVKRLPRVMTVAGIIVALGMRTA 273
FGR K++ RV TVAG++ L T+
Sbjct: 20 FGRGGKKISRVATVAGVLSELDDETS 45