BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026030
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   153   4e-41
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   153   4e-41
dbj|BAB01410.1| unnamed protein product [Arabidopsis thaliana]        147   9e-41
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-40
ref|NP_187924.2| ribosomal RNA small subunit methyltransferase B...   147   2e-40

>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  153 bits (386), Expect(2) = 4e-41
 Identities = 75/89 (84%), Positives = 79/89 (88%)
 Frame = -3

Query: 285 KCSGANEMGYVERTLGFCTCKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDERVFRS 106
           K SG NEMGYVERTLGF T  LDDRDLRLVTDIVGG+IRWRRYLDHLIV+LCHD + FRS
Sbjct: 85  KGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRS 144

Query: 105 MEPLLLQILRIVFYEILKLDMPPYVVVDE 19
           MEPLLLQILRI FYEI+ LDMPPY VVDE
Sbjct: 145 MEPLLLQILRIGFYEIVNLDMPPYAVVDE 173



 Score = 40.0 bits (92), Expect(2) = 4e-41
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 353 ISALRLMRIEYGGAFADLLNTKG 285
           +SA+RLMRIE GGAFADLLN +G
Sbjct: 62  VSAVRLMRIELGGAFADLLNERG 84


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  153 bits (386), Expect(2) = 4e-41
 Identities = 75/89 (84%), Positives = 79/89 (88%)
 Frame = -3

Query: 285 KCSGANEMGYVERTLGFCTCKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDERVFRS 106
           K SG NEMGYVERTLGF T  LDDRDLRLVTDIVGG+IRWRRYLDHLIV+LCHD + FRS
Sbjct: 85  KGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRS 144

Query: 105 MEPLLLQILRIVFYEILKLDMPPYVVVDE 19
           MEPLLLQILRI FYEI+ LDMPPY VVDE
Sbjct: 145 MEPLLLQILRIGFYEIVNLDMPPYAVVDE 173



 Score = 40.0 bits (92), Expect(2) = 4e-41
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 353 ISALRLMRIEYGGAFADLLNTKG 285
           +SA+RLMRIE GGAFADLLN +G
Sbjct: 62  VSAVRLMRIELGGAFADLLNERG 84


>dbj|BAB01410.1| unnamed protein product [Arabidopsis thaliana]
          Length = 531

 Score =  147 bits (370), Expect(2) = 9e-41
 Identities = 71/89 (79%), Positives = 78/89 (87%)
 Frame = -3

Query: 285 KCSGANEMGYVERTLGFCTCKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDERVFRS 106
           K SG+NEM YVERT+GF T  LDDRDLRLVTD+VGGTIRWRRYLDHLI +LCH+ER FR+
Sbjct: 91  KGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWRRYLDHLIGSLCHNERTFRN 150

Query: 105 MEPLLLQILRIVFYEILKLDMPPYVVVDE 19
           MEPLLLQILRI  YEI+K DMPPY VVDE
Sbjct: 151 MEPLLLQILRIGVYEIIKRDMPPYAVVDE 179



 Score = 45.1 bits (105), Expect(2) = 9e-41
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -1

Query: 365 GESMISALRLMRIEYGGAFADLLNTKG 285
           G   +SA+RLMRIEYGGAFADLLN KG
Sbjct: 64  GAYTVSAVRLMRIEYGGAFADLLNEKG 90


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  150 bits (379), Expect(2) = 1e-40
 Identities = 75/89 (84%), Positives = 79/89 (88%)
 Frame = -3

Query: 285 KCSGANEMGYVERTLGFCTCKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDERVFRS 106
           K SG NEMGYVERTLGF T  LDDRDLRLVTDIVGGTIRWRRYLD+LI +LCHDE+ FRS
Sbjct: 87  KGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEKAFRS 146

Query: 105 MEPLLLQILRIVFYEILKLDMPPYVVVDE 19
           MEPLLLQILRI FYEI+KLDMP Y VVDE
Sbjct: 147 MEPLLLQILRIGFYEIVKLDMPSYAVVDE 175



 Score = 41.2 bits (95), Expect(2) = 1e-40
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -1

Query: 353 ISALRLMRIEYGGAFADLLNTKG 285
           +SA+RLMRIE GGAFADLLN KG
Sbjct: 64  VSAVRLMRIEMGGAFADLLNDKG 86


>ref|NP_187924.2| ribosomal RNA small subunit methyltransferase B [Arabidopsis
           thaliana] gi|18176252|gb|AAL60011.1| putative sun
           protein fmu [Arabidopsis thaliana]
           gi|21436219|gb|AAM51397.1| putative sun protein fmu
           [Arabidopsis thaliana] gi|110740623|dbj|BAE98415.1|
           putative sun (fmu) protein [Arabidopsis thaliana]
           gi|332641785|gb|AEE75306.1| ribosomal RNA small subunit
           methyltransferase B [Arabidopsis thaliana]
          Length = 523

 Score =  147 bits (370), Expect(2) = 2e-40
 Identities = 71/89 (79%), Positives = 78/89 (87%)
 Frame = -3

Query: 285 KCSGANEMGYVERTLGFCTCKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDERVFRS 106
           K SG+NEM YVERT+GF T  LDDRDLRLVTD+VGGTIRWRRYLDHLI +LCH+ER FR+
Sbjct: 83  KGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWRRYLDHLIGSLCHNERTFRN 142

Query: 105 MEPLLLQILRIVFYEILKLDMPPYVVVDE 19
           MEPLLLQILRI  YEI+K DMPPY VVDE
Sbjct: 143 MEPLLLQILRIGVYEIIKRDMPPYAVVDE 171



 Score = 44.3 bits (103), Expect(2) = 2e-40
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = -1

Query: 353 ISALRLMRIEYGGAFADLLNTKG 285
           +SA+RLMRIEYGGAFADLLN KG
Sbjct: 60  VSAVRLMRIEYGGAFADLLNEKG 82