BLASTX nr result

ID: Coptis24_contig00026027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026027
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...    92   3e-17
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...    92   4e-17
ref|XP_002457943.1| hypothetical protein SORBIDRAFT_03g022895 [S...    90   2e-16
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    90   2e-16
ref|XP_002312645.1| multidrug resistance protein ABC transporter...    89   5e-16

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 7   SQLIFRWLNPLFEHCRARKLELSHIPPVPKPETADNSFSLLQESLARQKPKACSLPKALF 186
           S+L FRWLNP+F+  R +KLEL HIPPVP  ETA+N+ S+L+ESL +QK K  SL KA+ 
Sbjct: 210 SKLAFRWLNPIFKTGRIQKLELGHIPPVPPSETAENASSVLEESLRKQKLKGGSLTKAIA 269

Query: 187 GALWRPLAVNAVFAGI 234
            ++W+ LA+NAV AG+
Sbjct: 270 YSIWKSLALNAVLAGV 285


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 7   SQLIFRWLNPLFEHCRARKLELSHIPPVPKPETADNSFSLLQESLARQKPKACSLPKALF 186
           S+L FRWLNP+F+  R +KLEL HIPPVP  ETA+N+ S+L+ESL +QK +  SL KA+ 
Sbjct: 208 SKLAFRWLNPIFKAGRIKKLELGHIPPVPPSETAENASSVLEESLRKQKLEGGSLTKAIA 267

Query: 187 GALWRPLAVNAVFAGI 234
            +LW+ LA+NAV AG+
Sbjct: 268 YSLWKSLALNAVLAGV 283


>ref|XP_002457943.1| hypothetical protein SORBIDRAFT_03g022895 [Sorghum bicolor]
           gi|241929918|gb|EES03063.1| hypothetical protein
           SORBIDRAFT_03g022895 [Sorghum bicolor]
          Length = 376

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/76 (53%), Positives = 56/76 (73%)
 Frame = +1

Query: 7   SQLIFRWLNPLFEHCRARKLELSHIPPVPKPETADNSFSLLQESLARQKPKACSLPKALF 186
           SQL F+WLNP+FE     +LE+ HIP VP+ ETAD S++LLQE++ +QK +  SL K + 
Sbjct: 202 SQLTFQWLNPVFEKGHHVRLEIEHIPAVPQSETADQSYALLQETMHKQKTEPMSLQKGII 261

Query: 187 GALWRPLAVNAVFAGI 234
            A+W PL +NAVFAG+
Sbjct: 262 CAVWTPLVINAVFAGL 277


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223546054|gb|EEF47557.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/78 (56%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   ISSQLIFRWLNPLFEHCRARKLELSHIPPVPKPETADNSFSLLQESLARQKPKACSLPKA 180
           I SQ+ F+WLNPLF   R +KLELS+IP VP+ ETA  S SLL+ESL ++K ++ +LPKA
Sbjct: 216 IWSQITFQWLNPLFRRGRIQKLELSNIPLVPQSETAKCSSSLLEESLGKRKNESSNLPKA 275

Query: 181 LFGALWRPLAVNAVFAGI 234
           +  A+W+ LA+N VFAG+
Sbjct: 276 IAYAVWKSLAINGVFAGV 293


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/78 (52%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   ISSQLIFRWLNPLFEHCRARKLELSHIPPVPKPETADNSFSLLQESLARQKPKACSLPKA 180
           I S+L F+WLNPLF   R  KLELSH+PPVP  ETA  + SLL++S  + K +  +LPKA
Sbjct: 94  IWSKLTFKWLNPLFSSGRIEKLELSHVPPVPASETAKYASSLLEDSFGKNKKETLNLPKA 153

Query: 181 LFGALWRPLAVNAVFAGI 234
           +  A+W+ L +N VFAG+
Sbjct: 154 IAYAVWKSLTINGVFAGV 171


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