BLASTX nr result

ID: Coptis24_contig00025996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025996
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25882.1| unknown [Picea sitchensis]                             104   3e-20
ref|XP_002267796.1| PREDICTED: uncharacterized protein LOC100246...    97   9e-18
ref|XP_004139631.1| PREDICTED: uncharacterized protein LOC101202...    94   4e-17
ref|XP_002447691.1| hypothetical protein SORBIDRAFT_06g013230 [S...    91   5e-16
gb|AFK46140.1| unknown [Medicago truncatula]                           90   8e-16

>gb|ABK25882.1| unknown [Picea sitchensis]
          Length = 217

 Score =  104 bits (260), Expect = 3e-20
 Identities = 81/226 (35%), Positives = 116/226 (51%), Gaps = 2/226 (0%)
 Frame = +1

Query: 133 KRRSVKDRLGSVVEFGSDSFFGQQQHALKRQRQDTSTRNHIVTDHKVQEEIIVRKVVPET 312
           ++RSVK+RLG   +   DS         KRQR       H + D + + E+      P  
Sbjct: 11  RKRSVKERLGITAD---DSPTYAAHTTAKRQRPSDEKWKHDLYDDEEEGEL------PRV 61

Query: 313 L--KSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIKATSKSPARFSDVSNVKEMC 486
              K+ V   R   + +++K    S   G +++  G+ D++     P + S  +N +   
Sbjct: 62  SNGKTGVQDLR---VKLQQKNSYRSSPSGNDSQG-GVRDLREKLSGPIQ-SRPANTE--- 113

Query: 487 TSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLDIPSFLQVL 666
                 +  R++S  K +S    V +  PM+    A   T QK+    E+  + S LQ L
Sbjct: 114 ------AARRTVSVMKGSSASKPVPASKPMVPPVPAPSKTIQKQTPPAEERSVASLLQSL 167

Query: 667 GLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 804
           GL KYLITF+ EEVDM AL+HM DDDLKA+G+PMGPRKKILLAL S
Sbjct: 168 GLGKYLITFQAEEVDMTALRHMGDDDLKALGIPMGPRKKILLALDS 213


>ref|XP_002267796.1| PREDICTED: uncharacterized protein LOC100246803 [Vitis vinifera]
           gi|296081056|emb|CBI18337.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 78/232 (33%), Positives = 107/232 (46%)
 Frame = +1

Query: 109 YEFRSHGIKRRSVKDRLGSVVEFGSDSFFGQQQHALKRQRQDTSTRNHIVTDHKVQEEII 288
           Y  R     +RSV +RL        D    ++Q   KRQRQD     H + +   + +I 
Sbjct: 2   YADRVEAGAKRSVYERLNGT---SLDDSGRRRQFTGKRQRQDDDKWEHDLYEDG-ETQIS 57

Query: 289 VRKVVPETLKSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIKATSKSPARFSDVS 468
            RKV    L+          + +++K        G  + S G+ D++           V+
Sbjct: 58  NRKVGARDLR----------LKLQKKVGQQVPLSGKGSLSGGVRDLREKLSGTMHSQPVN 107

Query: 469 NVKEMCTSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLDIP 648
           N        ++   P     T+ N  V    S    + S+     T+QK      D  + 
Sbjct: 108 NDPPKAKPAMEAGKP-----TRKNVAVEAPVSGTKKVASQVPRNKTQQKA-----DTSVD 157

Query: 649 SFLQVLGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 804
            FLQ LGL KYLITF+ EEVDM AL HM D+DLKA+G+PMGPRKKILLAL S
Sbjct: 158 GFLQSLGLEKYLITFQAEEVDMTALIHMTDEDLKAMGIPMGPRKKILLALES 209


>ref|XP_004139631.1| PREDICTED: uncharacterized protein LOC101202907 [Cucumis sativus]
           gi|449475399|ref|XP_004154441.1| PREDICTED:
           uncharacterized LOC101202907 [Cucumis sativus]
          Length = 205

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 81/238 (34%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
 Frame = +1

Query: 109 YEFRSHGIKRRSVKDRLGSVVEFGSDSFFGQQQHAL--KRQRQDTSTRNHIVTDHKVQEE 282
           Y  R      RS+KDRL      G+ S    ++  +  KRQR+D    + +  + + Q  
Sbjct: 2   YADRLEADNHRSIKDRLN-----GNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTS 56

Query: 283 IIVRKVVPETLKSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIK----ATSKSPA 450
                             R+    +R K    S+ Q  NA   G+ D++     T K  A
Sbjct: 57  ----------------NRRVGARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQA 100

Query: 451 RFSDVSNVKEMCTSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLV 630
             +D    K   T       PR       N  +   +S     ++KSA+    +KK    
Sbjct: 101 ANNDPPKPKLEVTK-----APRK------NDAIEAHTSSTQKAVAKSAT----RKKAAQK 145

Query: 631 EDLDIPSFLQVLGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 804
            D  +  FLQ LGL KY ITF+ EEVDM AL HM DDDLKA+G+PMGPRKKILLAL S
Sbjct: 146 SDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALES 203


>ref|XP_002447691.1| hypothetical protein SORBIDRAFT_06g013230 [Sorghum bicolor]
           gi|241938874|gb|EES12019.1| hypothetical protein
           SORBIDRAFT_06g013230 [Sorghum bicolor]
          Length = 211

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 77/227 (33%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
 Frame = +1

Query: 133 KRRSVKDRLGSVVEFGSDSFFGQQQHAL-KRQRQDTSTRNHIVTDHKVQEEIIVRKVVPE 309
           ++RS+ DRL   +  G+ +  G+ +H + KRQRQ      H +  ++  +E   + + P+
Sbjct: 10  RKRSIHDRLDGDLPAGTGAG-GRVRHTVSKRQRQIDEKWKHDL--YREDDEPASKSIDPK 66

Query: 310 TLKSVVFQTRLPPIVMREKTVNMSKGQGINA-RSVGISDIKATSKSPARFSDVSNVKEMC 486
            L              R K    S  QG  + RS G+ D++           +S      
Sbjct: 67  DL--------------RLKLQRRSSQQGFTSTRSSGVRDLR---------EKLSGTMHPQ 103

Query: 487 TSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLD-IPSFLQV 663
            S       + +SE   N      + +MP   SK A   T  KK    +    + SFL  
Sbjct: 104 PSNADPPKRKPVSEV-VNISRRETADEMPARQSKKAPKQTSSKKTSQPKAASPLDSFLSS 162

Query: 664 LGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 804
           LGL KY ITF+ EEVDM AL+HM D DLKA+G+PMGPRKKI+LAL S
Sbjct: 163 LGLEKYSITFQAEEVDMAALRHMTDSDLKALGIPMGPRKKIILALES 209


>gb|AFK46140.1| unknown [Medicago truncatula]
          Length = 206

 Score = 90.1 bits (222), Expect = 8e-16
 Identities = 82/234 (35%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
 Frame = +1

Query: 109 YEFRSHGIKRRSVKDRLGSVVEFGSDSFFGQQQHALKRQRQDTSTRNHIVTDHKVQEE-- 282
           Y  R     RRSVK+RL   +   S S   Q+Q   KR RQD    + +  D   QE+  
Sbjct: 2   YADRVESGARRSVKERLDGSI---SVSTRNQRQVTGKRPRQDDKWEHDLYNDDVEQEQPR 58

Query: 283 IIVRKVVPETLKSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIKATSKSPARFSD 462
              RKV  + L+  + +  L P                 A   G S   +T     R S 
Sbjct: 59  TTNRKVTGQDLRVKLQKKGLQP-----------------ATRSGKSSTPSTRDLRERLSG 101

Query: 463 VSNVKEMCTSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLD 642
             N      +Q K S P   S+  A      V ++ P +   +     + +K     D  
Sbjct: 102 TMN------TQPKNSDPPK-SKVIAKPSSKSVGAEAPAVKRPANPAPKKARKAGTTVD-- 152

Query: 643 IPSFLQVLGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 804
              FL  LGL KY ITF+ EEVDM ALKHM D+DLK +G+PMGPRKKILLAL S
Sbjct: 153 --EFLLTLGLEKYFITFQAEEVDMTALKHMTDEDLKVMGIPMGPRKKILLALES 204


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