BLASTX nr result

ID: Coptis24_contig00025995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025995
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67631.1| hypothetical protein VITISV_035299 [Vitis vinifera]   249   1e-64
ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 ...   247   6e-64
ref|XP_003610997.1| Annotation was added to scaffolds in Novembe...   244   4e-63
ref|XP_002297977.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides]      242   2e-62

>emb|CAN67631.1| hypothetical protein VITISV_035299 [Vitis vinifera]
          Length = 654

 Score =  249 bits (637), Expect = 1e-64
 Identities = 118/151 (78%), Positives = 139/151 (92%)
 Frame = +2

Query: 2   KTLVSFGEVTPEQREEVQKFGLAIYSWAEFLQLGNSEQFDLPVLKKEDICTIMYTSGTTG 181
           KT+VSFG+VTPEQREEV+KFGLAIYSW EFLQLG+ ++FDLP+ KK DICTIMYTSGTTG
Sbjct: 167 KTIVSFGKVTPEQREEVEKFGLAIYSWEEFLQLGDDKKFDLPLTKKNDICTIMYTSGTTG 226

Query: 182 EPKGVMISNDAILTLIAGVNRVLESVNEELTATDVYLSYLPLAHIFDRAVEECLISNGAS 361
           +PKGVMISN++I+TLIAGV R+L+SVNEEL   DV++SYLPLAHIFDR +EE  IS+GAS
Sbjct: 227 DPKGVMISNESIVTLIAGVKRLLQSVNEELNEKDVFISYLPLAHIFDRVIEELFISHGAS 286

Query: 362 IGFWHGEVKLLVDDIGELKPSIFCAVPRVLE 454
           IGFW G+VKLLV+DIGELKP+IFCAVPRVL+
Sbjct: 287 IGFWRGDVKLLVEDIGELKPTIFCAVPRVLD 317


>ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 [Vitis vinifera]
           gi|297742330|emb|CBI34479.3| unnamed protein product
           [Vitis vinifera]
          Length = 662

 Score =  247 bits (631), Expect = 6e-64
 Identities = 117/151 (77%), Positives = 138/151 (91%)
 Frame = +2

Query: 2   KTLVSFGEVTPEQREEVQKFGLAIYSWAEFLQLGNSEQFDLPVLKKEDICTIMYTSGTTG 181
           KT+VSFG+VTPEQREEV+KFGLAIY W EFLQLG+ ++FDLP+ KK DICTIMYTSGTTG
Sbjct: 176 KTIVSFGKVTPEQREEVEKFGLAIYYWEEFLQLGDDKKFDLPLTKKNDICTIMYTSGTTG 235

Query: 182 EPKGVMISNDAILTLIAGVNRVLESVNEELTATDVYLSYLPLAHIFDRAVEECLISNGAS 361
           +PKGVMISN++I+TLIAGV R+L+SVNEEL   DV++SYLPLAHIFDR +EE  IS+GAS
Sbjct: 236 DPKGVMISNESIVTLIAGVKRLLQSVNEELNEKDVFISYLPLAHIFDRVIEELFISHGAS 295

Query: 362 IGFWHGEVKLLVDDIGELKPSIFCAVPRVLE 454
           IGFW G+VKLLV+DIGELKP+IFCAVPRVL+
Sbjct: 296 IGFWRGDVKLLVEDIGELKPTIFCAVPRVLD 326


>ref|XP_003610997.1| Annotation was added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula] gi|355512332|gb|AES93955.1| Annotation was
           added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula]
          Length = 662

 Score =  244 bits (624), Expect = 4e-63
 Identities = 114/151 (75%), Positives = 136/151 (90%)
 Frame = +2

Query: 2   KTLVSFGEVTPEQREEVQKFGLAIYSWAEFLQLGNSEQFDLPVLKKEDICTIMYTSGTTG 181
           KT+VSFG+VTPEQ++EV+KFGLAIYSW EFLQLG S  FDLPV K+ DICTIMYTSGTTG
Sbjct: 176 KTIVSFGKVTPEQKQEVEKFGLAIYSWTEFLQLGKSHSFDLPVKKRSDICTIMYTSGTTG 235

Query: 182 EPKGVMISNDAILTLIAGVNRVLESVNEELTATDVYLSYLPLAHIFDRAVEECLISNGAS 361
           +PKGV+ISN++I+TL+AGV R+LESVNE+LT  DVYLSYLPLAHIFDR +EE  I +G S
Sbjct: 236 DPKGVLISNESIITLLAGVKRLLESVNEKLTEKDVYLSYLPLAHIFDRVIEETFIWHGGS 295

Query: 362 IGFWHGEVKLLVDDIGELKPSIFCAVPRVLE 454
           IGFW G+VKLL++D+GELKP+IFCAVPRVL+
Sbjct: 296 IGFWRGDVKLLIEDLGELKPTIFCAVPRVLD 326


>ref|XP_002297977.1| predicted protein [Populus trichocarpa] gi|222845235|gb|EEE82782.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  242 bits (618), Expect = 2e-62
 Identities = 113/151 (74%), Positives = 137/151 (90%)
 Frame = +2

Query: 2   KTLVSFGEVTPEQREEVQKFGLAIYSWAEFLQLGNSEQFDLPVLKKEDICTIMYTSGTTG 181
           KT+VSFG+V  +++EE++KFGLA+YSW EFL LG ++Q++LPV KKEDICTIMYTSGTTG
Sbjct: 176 KTIVSFGKVASKEKEEIEKFGLAVYSWDEFLNLGENKQYELPVKKKEDICTIMYTSGTTG 235

Query: 182 EPKGVMISNDAILTLIAGVNRVLESVNEELTATDVYLSYLPLAHIFDRAVEECLISNGAS 361
           +PKGVMISND+I+TL+AGV R+LESVNE LT+ DVYLSYLPLAHIFDR +EE  I +GAS
Sbjct: 236 DPKGVMISNDSIVTLLAGVKRLLESVNEALTSKDVYLSYLPLAHIFDRVIEELFIQHGAS 295

Query: 362 IGFWHGEVKLLVDDIGELKPSIFCAVPRVLE 454
           IGFW G+VKLL++DIGELKPSIFCAVPRVL+
Sbjct: 296 IGFWRGDVKLLLEDIGELKPSIFCAVPRVLD 326


>gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 662

 Score =  242 bits (618), Expect = 2e-62
 Identities = 114/151 (75%), Positives = 137/151 (90%)
 Frame = +2

Query: 2   KTLVSFGEVTPEQREEVQKFGLAIYSWAEFLQLGNSEQFDLPVLKKEDICTIMYTSGTTG 181
           KT+VSFG+V  +++EE++KFGLA+YSW EFL+LG ++Q++LPV KKEDICTIMYTSGTTG
Sbjct: 176 KTIVSFGKVASKEKEEIEKFGLAVYSWDEFLKLGENKQYELPVKKKEDICTIMYTSGTTG 235

Query: 182 EPKGVMISNDAILTLIAGVNRVLESVNEELTATDVYLSYLPLAHIFDRAVEECLISNGAS 361
            PKGVMISND+I+TL+AGV R+LESVNE LT+ DVYLSYLPLAHIFDR +EE  I +GAS
Sbjct: 236 YPKGVMISNDSIVTLLAGVKRLLESVNEALTSKDVYLSYLPLAHIFDRVIEELFIQHGAS 295

Query: 362 IGFWHGEVKLLVDDIGELKPSIFCAVPRVLE 454
           IGFW G+VKLL++DIGELKPSIFCAVPRVLE
Sbjct: 296 IGFWRGDVKLLLEDIGELKPSIFCAVPRVLE 326


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