BLASTX nr result
ID: Coptis24_contig00025988
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025988 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [... 118 5e-25 ref|XP_002526048.1| protein with unknown function [Ricinus commu... 118 5e-25 ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [... 118 7e-25 ref|XP_002312839.1| predicted protein [Populus trichocarpa] gi|1... 118 7e-25 ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatu... 117 1e-24 >ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max] Length = 211 Score = 118 bits (296), Expect = 5e-25 Identities = 55/62 (88%), Positives = 60/62 (96%) Frame = -1 Query: 489 MSYDYLLKFIIIGDTGVGKSCLLLQFTDQRFQPVHDLTIGVEFGAKMVTINTSPIKLQIW 310 MSYDYL K+IIIGDTGVGKSCLLLQFTD+RFQPVHDLTIGVEFGA+MVTI++ PIKLQIW Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIW 60 Query: 309 DT 304 DT Sbjct: 61 DT 62 >ref|XP_002526048.1| protein with unknown function [Ricinus communis] gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis] Length = 211 Score = 118 bits (296), Expect = 5e-25 Identities = 55/62 (88%), Positives = 60/62 (96%) Frame = -1 Query: 489 MSYDYLLKFIIIGDTGVGKSCLLLQFTDQRFQPVHDLTIGVEFGAKMVTINTSPIKLQIW 310 MSYDYL K+IIIGDTGVGKSCLLLQFTD+RFQPVHDLTIGVEFGA+MVTI++ PIKLQIW Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIW 60 Query: 309 DT 304 DT Sbjct: 61 DT 62 >ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus] gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus] Length = 211 Score = 118 bits (295), Expect = 7e-25 Identities = 55/62 (88%), Positives = 59/62 (95%) Frame = -1 Query: 489 MSYDYLLKFIIIGDTGVGKSCLLLQFTDQRFQPVHDLTIGVEFGAKMVTINTSPIKLQIW 310 MSYDYL K+IIIGDTGVGKSCLLLQFTD+RFQPVHDLTIGVEFGA+MVTI+ PIKLQIW Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60 Query: 309 DT 304 DT Sbjct: 61 DT 62 >ref|XP_002312839.1| predicted protein [Populus trichocarpa] gi|118481778|gb|ABK92828.1| unknown [Populus trichocarpa] gi|222849247|gb|EEE86794.1| predicted protein [Populus trichocarpa] Length = 211 Score = 118 bits (295), Expect = 7e-25 Identities = 55/62 (88%), Positives = 59/62 (95%) Frame = -1 Query: 489 MSYDYLLKFIIIGDTGVGKSCLLLQFTDQRFQPVHDLTIGVEFGAKMVTINTSPIKLQIW 310 MSYDYL K+IIIGDTGVGKSCLLLQFTD+RFQPVHDLTIGVEFGA+MVTI+ PIKLQIW Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60 Query: 309 DT 304 DT Sbjct: 61 DT 62 >ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula] gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula] Length = 211 Score = 117 bits (293), Expect = 1e-24 Identities = 54/62 (87%), Positives = 60/62 (96%) Frame = -1 Query: 489 MSYDYLLKFIIIGDTGVGKSCLLLQFTDQRFQPVHDLTIGVEFGAKMVTINTSPIKLQIW 310 MSYDYL K+IIIGDTGVGKSCLLLQFTD+RFQPVHDLTIGVEFGA+M+TI++ PIKLQIW Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60 Query: 309 DT 304 DT Sbjct: 61 DT 62