BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025968
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              75   7e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              75   7e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              74   9e-12
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    71   8e-11
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    70   2e-10

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
 Frame = -1

Query: 456  SEWFLALFGATLWHIWLARNEVKFKGSKVDPSIYWKR--VMSMAXXXXXXXXXXXXXXXT 283
            + W L +F   LW++W ARN + F  +   PS    R  + S                  
Sbjct: 1669 TNWSL-IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQ 1727

Query: 282  LYIRWWPPPGNWFKLNAYGSAMGNPGAAGAGCLLRDTNGSFIFGIATPILHATCNIAEFW 103
             ++ W PP   + KLN+ G+   +   A AG LLR+ NG ++ G    I  A   +AE W
Sbjct: 1728 TWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELW 1787

Query: 102  GLLLGLRVLKAMGLTRVILETDSRVLFLAITED 4
            GL  GL + K  G T++I ETDS  +   + +D
Sbjct: 1788 GLREGLLLAKNRGFTKLIAETDSEAVVQVLRKD 1820


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
 Frame = -1

Query: 456  SEWFLALFGATLWHIWLARNEVKFKGSKVDPSIYWKR--VMSMAXXXXXXXXXXXXXXXT 283
            + W L +F   LW++W ARN + F  +   PS    R  + S                  
Sbjct: 1137 TNWSL-IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQ 1195

Query: 282  LYIRWWPPPGNWFKLNAYGSAMGNPGAAGAGCLLRDTNGSFIFGIATPILHATCNIAEFW 103
             ++ W PP   + KLN+ G+   +   A AG LLR+ NG ++ G    I  A   +AE W
Sbjct: 1196 TWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELW 1255

Query: 102  GLLLGLRVLKAMGLTRVILETDSRVLFLAITED 4
            GL  GL + K  G T++I ETDS  +   + +D
Sbjct: 1256 GLREGLLLAKNRGFTKLIAETDSEAVVQVLRKD 1288


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
 Frame = -1

Query: 456  SEWFLALFGATLWHIWLARNEVKFKGSKVDPSIYWKR--VMSMAXXXXXXXXXXXXXXXT 283
            + W L +F   LW++W ARN + F  +   PS    R  + S                  
Sbjct: 1137 TNWSL-IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQ 1195

Query: 282  LYIRWWPPPGNWFKLNAYGSAMGNPGAAGAGCLLRDTNGSFIFGIATPILHATCNIAEFW 103
             ++ W PP   + KLN+ G+   +   A AG LLR+ NG ++ G    I  A   +AE W
Sbjct: 1196 TWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELW 1255

Query: 102  GLLLGLRVLKAMGLTRVILETDSRVLFLAITED 4
            GL  GL + K  G T++I ETDS  +   + +D
Sbjct: 1256 GLREGLLLAKNRGFTKLIAETDSEAVVQVLRKD 1288


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = -1

Query: 276 IRWWPPPGNWFKLNAYGSAMGNPGAAGAGCLLRDTNGSFIFGIATPILHATCNIAEFWGL 97
           + W  P   W KLN  G++ GNPG A AG +LRD NG++I G A  I   +  +AE WG+
Sbjct: 151 VSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGV 210

Query: 96  LLGLRVLKAMGLTRVILETDSRVL 25
             GL +    G  RV LE DS+++
Sbjct: 211 YYGLFIAWGRGARRVELEVDSKMV 234


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
 Frame = -1

Query: 435 FGATLWHIWLARNEVKFK---GSKVDPSIYWKRVMSMAXXXXXXXXXXXXXXXTLYIRWW 265
           F  T W++W  RN+  F+       +P++  ++                    T+YI W 
Sbjct: 570 FMTTCWYLWNWRNKSIFEIGFQRPSNPTLVIQKFTREIEDNTKLVHKSSHQKETIYIGWM 629

Query: 264 PPPGNWFKLNAYGSAMGNPGAAGAGCLLRDTNGSFIFGIATPILHATCNIAEFWGLLLGL 85
            PP  W KLN  G+  G+   AG G LLRD++G +I G    I       AE WG+ LGL
Sbjct: 630 RPPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGL 689

Query: 84  RVLKAMGLTRVILETDSRVLFL 19
            +      T +I+E+DS++L L
Sbjct: 690 DMAWRENTTHLIVESDSKILSL 711