BLASTX nr result

ID: Coptis24_contig00025963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025963
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573151.1| PREDICTED: LOW QUALITY PROTEIN: ferrochelata...    48   1e-08
ref|XP_002277290.1| PREDICTED: ferrochelatase-2, chloroplastic [...    47   2e-08
emb|CAN67281.1| hypothetical protein VITISV_021593 [Vitis vinifera]    47   2e-08
ref|XP_002309511.1| predicted protein [Populus trichocarpa] gi|2...    47   2e-08
ref|XP_002516467.1| ferrochelatase, putative [Ricinus communis] ...    47   7e-08

>ref|XP_003573151.1| PREDICTED: LOW QUALITY PROTEIN: ferrochelatase-1,
           chloroplastic-like [Brachypodium distachyon]
          Length = 461

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +2

Query: 2   VPALGCTSSFISDLADAVIEALP 70
           VPALGCTSSFISDLADAVIEALP
Sbjct: 388 VPALGCTSSFISDLADAVIEALP 410



 Score = 35.8 bits (81), Expect(2) = 1e-08
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 103 MSRYTLKLCFDSLLAFTFLFFPKLISTFKNYL 198
           + RY  K+ F S+LAF  L  P++ISTF+N L
Sbjct: 429 LRRYLSKMFFGSILAFILLLSPRMISTFRNNL 460


>ref|XP_002277290.1| PREDICTED: ferrochelatase-2, chloroplastic [Vitis vinifera]
           gi|296081616|emb|CBI20621.3| unnamed protein product
           [Vitis vinifera]
          Length = 465

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 2   VPALGCTSSFISDLADAVIEALP 70
           VPALGCTSSFI+DLADAVIEALP
Sbjct: 393 VPALGCTSSFITDLADAVIEALP 415



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +1

Query: 112 YTLKLCFDSLLAFTFLFFPKLISTFKNYL 198
           Y +K+ F S+LAF  L  PK+IS FKN L
Sbjct: 436 YAIKMFFGSILAFVLLLSPKMISKFKNQL 464


>emb|CAN67281.1| hypothetical protein VITISV_021593 [Vitis vinifera]
          Length = 445

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 2   VPALGCTSSFISDLADAVIEALP 70
           VPALGCTSSFI+DLADAVIEALP
Sbjct: 373 VPALGCTSSFITDLADAVIEALP 395



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +1

Query: 112 YTLKLCFDSLLAFTFLFFPKLISTFKNYL 198
           Y +K+ F S+LAF  L  PK+IS FKN L
Sbjct: 416 YAIKMFFGSILAFVLLLSPKMISKFKNQL 444


>ref|XP_002309511.1| predicted protein [Populus trichocarpa] gi|222855487|gb|EEE93034.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 2   VPALGCTSSFISDLADAVIEALP 70
           VPALGCTSSFI+DLADAVIEALP
Sbjct: 339 VPALGCTSSFITDLADAVIEALP 361



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +1

Query: 112 YTLKLCFDSLLAFTFLFFPKLISTFKNYL 198
           Y +K+ F S+LAF  LF PK+I+ F+N L
Sbjct: 383 YAIKMIFGSVLAFVLLFSPKVITAFRNLL 411


>ref|XP_002516467.1| ferrochelatase, putative [Ricinus communis]
           gi|223544287|gb|EEF45808.1| ferrochelatase, putative
           [Ricinus communis]
          Length = 480

 Score = 47.0 bits (110), Expect(2) = 7e-08
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 2   VPALGCTSSFISDLADAVIEALP 70
           VPALGCTSSFI+DLADAVIEALP
Sbjct: 407 VPALGCTSSFITDLADAVIEALP 429



 Score = 34.3 bits (77), Expect(2) = 7e-08
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 109 RYTLKLCFDSLLAFTFLFFPKLISTFKN 192
           RY +KL F S+LAF  L  PK+I  F+N
Sbjct: 450 RYAIKLFFGSILAFILLLSPKMIFAFRN 477


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