BLASTX nr result
ID: Coptis24_contig00025944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00025944
(1022 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516925.1| pentatricopeptide repeat-containing protein,... 530 e-148
ref|XP_003617758.1| Pentatricopeptide repeat-containing protein ... 528 e-148
ref|XP_002882500.1| pentatricopeptide repeat-containing protein ... 527 e-147
ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi... 526 e-147
ref|NP_187348.1| pentatricopeptide repeat-containing protein [Ar... 523 e-146
>ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544013|gb|EEF45539.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 901
Score = 530 bits (1364), Expect = e-148
Identities = 249/340 (73%), Positives = 294/340 (86%)
Frame = -1
Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
S TCIEL+ C+ S +L++ F+LIQ +RKFKFRPAFSAYTTLIGA + V E + LTLF
Sbjct: 162 STKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLF 221
Query: 842 QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
QMQELGYEV++ LFTT+IRVFA+EG++DAAL+LLD++KS+ AD VLYNVCIDCFGK
Sbjct: 222 HQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKA 281
Query: 662 GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
GKVDMAWKFFHE+ + GL PDDVTYTSMIGVLCK RLDEAV++FE ME NR VPCAYAY
Sbjct: 282 GKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAY 341
Query: 482 NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
NTMIMGYGSAGKFDEAY LLERQK +GCIPSVIAYNCILTCLG+KGR+ EALR EEMKK
Sbjct: 342 NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK 401
Query: 302 DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
DA PNLSTYN+LIDMLC+AG++E+ ++ RD M+ AGLFPNV+TVNIM+DRLCKA+K+DEA
Sbjct: 402 DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEA 461
Query: 122 CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
C IF+ M K C+PD++TFCSLIDGLG+ GRVD+AY L+E
Sbjct: 462 CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501
Score = 171 bits (433), Expect = 3e-40
Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 1/290 (0%)
Frame = -1
Query: 869 EPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYN 690
E G LF++++ G+ ++ ++ LI K G L +K DT YN
Sbjct: 562 ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621
Query: 689 VCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELN 510
ID F K GKV+ A++ EM +G P VTY S+I L K RLDEA LFE + N
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681
Query: 509 RRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEA 330
Y+++I G+G G+ DEAY ++E +KG P+V +NC+L L + ++EA
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741
Query: 329 LRIIEEMKK-DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDR 153
L + MK PN TY+ILI+ LCR K + M++ GL PN +T M+
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801
Query: 152 LCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
L KA + EA +F+ PD ++ ++I+GL R EAY +FE
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE 851
Score = 163 bits (413), Expect = 5e-38
Identities = 95/325 (29%), Positives = 169/325 (52%), Gaps = 1/325 (0%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
+ +A++L++ + P+ AY ++ G AL F++M++ N+ +
Sbjct: 353 KFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYN 411
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
LI + K G+V+AA + D +K + + N+ ID K K+D A F MN +
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
+PD+VT+ S+I L K R+D+A L+E M + ++P A Y ++I + G+ ++
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Query: 434 YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDM 258
+K+ + +GC P + N + C+ + G + + EE+K + P++ +Y+ILI
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591
Query: 257 LCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPD 78
L +AG YE M+ G + N +D CK+ KV++A ++ ++M K P
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651
Query: 77 KITFCSLIDGLGRFGRVDEAYSLFE 3
+T+ S+IDGL + R+DEAY LFE
Sbjct: 652 VVTYGSVIDGLAKIDRLDEAYMLFE 676
Score = 157 bits (397), Expect = 4e-36
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
+++L +A ++ + + P + +LI A L++QM + N +
Sbjct: 455 AKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV 514
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+T+LI+ F K G+ + + ++ D L N +DC K G+ F E+
Sbjct: 515 YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK 574
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
++G PD ++Y+ +I L KA E +LF M+ V +AYNT I G+ +GK +
Sbjct: 575 SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDA-KPNLSTYNILI 264
+AY+LLE K KG P+V+ Y ++ L + R+DEA + EE K + + N+ Y+ LI
Sbjct: 635 KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694
Query: 263 DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
D + G+I+ Y + + + GL PNV T N ++D L KA++++EA F++M T
Sbjct: 695 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGT 754
Query: 83 PDKITFCSLIDGLGRFGRVDEAYSLFE 3
P+ IT+ LI+GL R + ++A+ ++
Sbjct: 755 PNHITYSILINGLCRVRKFNKAFVFWQ 781
Score = 130 bits (328), Expect = 4e-28
Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 36/369 (9%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
++T RL +A + ++K P S Y LI E A + M+E G
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
N+ +I K ++D A ++ + + D V + ID GK G+VD A+
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETM------------------- 519
+ + +M P+ V YTS+I K R ++ +F+ M
Sbjct: 498 RLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCV 557
Query: 518 --------------ELNRR--VPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSV 387
E+ R +P +Y+ +I G AG E Y+L KE+GC+
Sbjct: 558 FKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDT 617
Query: 386 IAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLCRAGKIESVYETRDT 210
AYN + + G+V++A +++EEMK K +P + TY +ID L + +++ Y +
Sbjct: 618 HAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 677
Query: 209 MERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGR 30
+ GL NV+ + ++D K ++DEA I +++ QK TP+ T+ L+D L +
Sbjct: 678 AKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 737
Query: 29 VDEAYSLFE 3
++EA F+
Sbjct: 738 INEALVCFQ 746
Score = 119 bits (297), Expect = 2e-24
Identities = 70/263 (26%), Positives = 135/263 (51%), Gaps = 1/263 (0%)
Frame = -1
Query: 908 AYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKV 729
AY T I F + A L ++M+ G + + + ++I AK ++D A L ++
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678
Query: 728 KSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRL 549
KS+ E + V+Y+ ID FGKVG++D A+ E+ +GL P+ T+ ++ L KA+ +
Sbjct: 679 KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 738
Query: 548 DEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCI 369
+EA+ F+ M+ + P Y+ +I G KF++A+ + +++G P+ I Y +
Sbjct: 739 NEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTM 798
Query: 368 LTCLGRKGRVDEALRIIEEMKKD-AKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGL 192
+ L + G + EA + E K + P+ ++YN +I+ L + + Y+ + G
Sbjct: 799 IAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGC 858
Query: 191 FPNVLTVNIMVDRLCKAQKVDEA 123
+ T ++D L K + +++A
Sbjct: 859 NIHTKTCIALLDALQKDECLEQA 881
Score = 115 bits (287), Expect = 2e-23
Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Frame = -1
Query: 695 YNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETME 516
Y+ + K K D + EM+ G P T +I K+ +L E DL + M
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR 190
Query: 515 LNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVD 336
+ P AY T+I S + D L + +E G SV + ++ R+GR+D
Sbjct: 191 KFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLD 250
Query: 335 EALRIIEEMKKDA-KPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMV 159
AL +++EMK + ++ YN+ ID +AGK++ ++ ++ GL P+ +T M+
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310
Query: 158 DRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
LCK ++DEA IF+ M Q P + ++I G G G+ DEAYSL E
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE 362
Score = 108 bits (269), Expect = 3e-21
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
S ++ A+ L++ ++ +P Y ++I A + A LF++ + G E+N+ +
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+++LI F K G++D A +++++ + +N +D K +++ A F M
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
P+ +TY+ +I LC+ ++ ++A ++ M+ P Y TMI G AG
Sbjct: 750 NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIA 809
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
EA L ER K G +P +YN I+ L R EA +I EE + K + T L+
Sbjct: 810 EASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALL 869
Query: 263 DML 255
D L
Sbjct: 870 DAL 872
Score = 70.5 bits (171), Expect = 6e-10
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 38/245 (15%)
Frame = -1
Query: 623 NAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNR-RVPCAYAYNTMIMGYGSAGK 447
NA L + +IGVL +AK +++A+ F E + C AY+++++ K
Sbjct: 84 NALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVK 143
Query: 446 FDEAYKLLERQKEKGCIPSV-IAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYN 273
FD ++L G PS IL+C+ + ++ E +I+ M+K +P S Y
Sbjct: 144 FDYFEQILGEMSIAGFGPSTKTCIELILSCI-KSNKLREGFDLIQCMRKFKFRPAFSAYT 202
Query: 272 ILIDML-----------------------------------CRAGKIESVYETRDTMERA 198
LI L R G++++ D M+
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN 262
Query: 197 GLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEA 18
L +++ N+ +D KA KVD A + F ++ PD +T+ S+I L + R+DEA
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322
Query: 17 YSLFE 3
+FE
Sbjct: 323 VEIFE 327
Score = 62.4 bits (150), Expect = 2e-07
Identities = 39/154 (25%), Positives = 72/154 (46%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
L+ V ++ + +A Q+++ K P Y+ LI V + A +Q+MQ+ G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
+ N +TT+I AK G + A +L ++ K++ D+ YN I+ + A+
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
K F E +G T +++ L K + L++A
Sbjct: 848 KIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881
>ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 906
Score = 528 bits (1361), Expect = e-148
Identities = 250/340 (73%), Positives = 297/340 (87%)
Frame = -1
Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
SN+ +ELV V S +LK+AF +I+ +RKFKFRPAFSAYTTLIGA + + P LTLF
Sbjct: 167 SNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLF 226
Query: 842 QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
QMQE+GYE N+ LFTTL+RVFA+EG++DAAL+LLD++KS++F AD VLYNVCIDCFGKV
Sbjct: 227 HQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKV 286
Query: 662 GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
GKVDMAWKFFHEM AQGL PDDVTYT++IGVLCKA+RLDEAV+LFE ++LNR VPC YAY
Sbjct: 287 GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346
Query: 482 NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
NTMIMGYGSAGKFDEAY LLERQK KGCIPSVIAYNCILTCLGRKG+V+EALRI +EM++
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406
Query: 302 DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
DA PNL+TYNILIDMLC+AG++E+ + +DTM+ AGLFPN++TVNIM+DRLCKAQK+DEA
Sbjct: 407 DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466
Query: 122 CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
C IF + K C+PD TFCSLIDGLGR GRVD+AYSL+E
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYE 506
Score = 165 bits (417), Expect = 2e-38
Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 1/325 (0%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
R+ DA++L + + P YT+LI F ++++M G ++ L
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLN 556
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
+ + K G+V+ AL +++K+ D Y++ I K G +K F+EM Q
Sbjct: 557 SYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQ 616
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
GL D + Y ++I CK+ ++D+A L E M+ P Y +++ G + DEA
Sbjct: 617 GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676
Query: 434 YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEE-MKKDAKPNLSTYNILIDM 258
Y L E K G +V+ Y+ ++ G+ GR+DEA I+EE M+K PN T+N L+D
Sbjct: 677 YMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736
Query: 257 LCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPD 78
L +A +I+ M+ PN +T +IM++ LC +K ++A +++M ++ P+
Sbjct: 737 LVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPN 796
Query: 77 KITFCSLIDGLGRFGRVDEAYSLFE 3
IT+ ++I GL + G V EA LF+
Sbjct: 797 NITYTTMIAGLAKAGNVMEARGLFD 821
Score = 160 bits (406), Expect = 4e-37
Identities = 91/325 (28%), Positives = 174/325 (53%), Gaps = 1/325 (0%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
+ +A++L++ ++ P+ AY ++ + AL + +M++ N+ +
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYN 416
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
LI + K G+++AAL + D +K + + N+ ID K K+D A F ++ +
Sbjct: 417 ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
+PD T+ S+I L + R+D+A L+E M + ++P Y ++I + G+ ++
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536
Query: 434 YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDM 258
+K+ + +GC P ++ N + C+ + G V++ + EE+K + P++ +Y+ILI
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596
Query: 257 LCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPD 78
L +AG Y+ M+ GL +VL N ++D CK+ KVD+A ++ ++M K P
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656
Query: 77 KITFCSLIDGLGRFGRVDEAYSLFE 3
+T+ S++DGL + R+DEAY LFE
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFE 681
Score = 159 bits (401), Expect = 1e-36
Identities = 95/283 (33%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
Frame = -1
Query: 848 LFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFG 669
LF++++ G +++ ++ LI K G L ++K D + YN ID F
Sbjct: 574 LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633
Query: 668 KVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAY 489
K GKVD A++ EM +GL P VTY S++ L K RLDEA LFE +
Sbjct: 634 KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 488 AYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEM 309
Y+++I G+G G+ DEAY +LE +KG P+ +NC+L L + +DEA + M
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753
Query: 308 KK-DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKV 132
K PN TY+I+I+ LC K + M++ GL PN +T M+ L KA V
Sbjct: 754 KNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNV 813
Query: 131 DEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
EA +F PD + ++I+GL + +AY +FE
Sbjct: 814 MEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFE 856
Score = 137 bits (345), Expect = 4e-30
Identities = 88/334 (26%), Positives = 164/334 (49%), Gaps = 1/334 (0%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
L+ + + L+ A + ++++ P +I + A ++F +
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
+ + F +LI + G+VD A +L +K+ + V+Y I F K G+ +
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGY 462
K + EM +G +PD + S + + KA +++ LFE ++ VP +Y+ +I G
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597
Query: 461 GSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNL 285
AG E YKL KE+G V+AYN ++ + G+VD+A +++EEMK K +P +
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657
Query: 284 STYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKD 105
TY ++D L + +++ Y + + G+ NV+ + ++D K ++DEA I ++
Sbjct: 658 VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717
Query: 104 MAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
+ QK TP+ T+ L+D L + +DEA F+
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751
Score = 123 bits (309), Expect = 6e-26
Identities = 78/295 (26%), Positives = 146/295 (49%), Gaps = 4/295 (1%)
Frame = -1
Query: 968 KDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFTTL 789
++ + L +++ AY T+I F + A L ++M+ G + + + ++
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663
Query: 788 IRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGL 609
+ AK ++D A L ++ KS + + V+Y+ ID FGKVG++D A+ E+ +GL
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723
Query: 608 APDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYK 429
P+ T+ ++ L KA+ +DEA F+ M+ + P A Y+ MI G KF++A+
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783
Query: 428 LLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLC 252
+ +++G P+ I Y ++ L + G V EA + + K P+ + YN +I+ L
Sbjct: 784 FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843
Query: 251 RAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEAC---RIFKDMAQ 96
A K Y + G N T +++D L KA +++A + ++MA+
Sbjct: 844 SANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898
Score = 110 bits (274), Expect = 7e-22
Identities = 64/250 (25%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
S ++ A+ L++ ++ +P Y +++ A + A LF++ + +G ++N+ +
Sbjct: 635 SGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+++LI F K G++D A +L+++ ++ +N +D K ++D A F M
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
+P+ +TY+ MI LC ++ ++A ++ M+ P Y TMI G AG
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
EA L +R K G +P YN ++ L + +A + EE + K + N T +L+
Sbjct: 815 EARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLL 874
Query: 263 DMLCRAGKIE 234
D L +A +E
Sbjct: 875 DALHKADCLE 884
Score = 64.3 bits (155), Expect = 5e-08
Identities = 40/154 (25%), Positives = 70/154 (45%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
L+ V ++ + +A Q+++ K P Y+ +I ++ + A +Q+MQ+ G
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
+ N +TT+I AK G V A L D+ K+ D+ YN I+ K A+
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAY 852
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
F E +G + T ++ L KA L++A
Sbjct: 853 IVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886
>ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328340|gb|EFH58759.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 527 bits (1358), Expect = e-147
Identities = 252/340 (74%), Positives = 296/340 (87%)
Frame = -1
Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
S NTCIE+V CV + +L++ F+++Q++RKFKFRPAFSAYTTLIGAF+ V+ + LTLF
Sbjct: 132 SVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 842 QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
QQMQELGYE + LFTTLIR FAKEG+VD+AL+LLD++KS + +AD VLYNVCID FGKV
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 662 GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
GKVDMAWKFFHE+ A GL PD+VTYTSMIGVLCKA RLDEAV++FE +E NRRVPC YAY
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 482 NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
NTMIMGYGSAGKFDEAY LLERQ+ KG IPSVIAYNCILTCL + G+VDEALR+ EEMKK
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK 371
Query: 302 DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
DA PNLSTYNILIDMLCRAGK++ +E RD+M++AGLFPNV TVNIMVDRLCK+QK+DEA
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 122 CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
C IF+ M K CTPD+ITFCSLIDGLG+ GRVD+AY ++E
Sbjct: 432 CAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYE 471
Score = 165 bits (417), Expect = 2e-38
Identities = 100/328 (30%), Positives = 157/328 (47%), Gaps = 1/328 (0%)
Frame = -1
Query: 983 NSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQ 804
N R +D + + + P T + EP +F++++ + + +
Sbjct: 494 NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553
Query: 803 LFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEM 624
++ LI K G + L +K DT YN+ ID F K GKV+ A++ EM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 623 NAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKF 444
+G P VTY S+I L K RLDEA LFE + R Y+++I G+G G+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 443 DEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNIL 267
DEAY +LE +KG P+V +N +L L + ++EAL + MK+ PN TY IL
Sbjct: 674 DEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 266 IDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSC 87
I+ LC+ K + M++ G+ P+ ++ M+ L KA + EA +F
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 86 TPDKITFCSLIDGLGRFGRVDEAYSLFE 3
PD + ++I+GL R +A+SLFE
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 159 bits (401), Expect = 1e-36
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 36/373 (9%)
Frame = -1
Query: 1013 TCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQM 834
T ++ + + RL +A + + + K + P AY T+I + + A +L ++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 833 QELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKV 654
+ G ++ + ++ K G+VD AL + +++K A + YN+ ID + GK+
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKL 393
Query: 653 DMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTM 474
D A++ M GL P+ T M+ LCK+++LDEA +FE M+ P + ++
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453
Query: 473 IMGYGSAGKFDEAYKLLER------------------------QKEKG-----------C 399
I G G G+ D+AYK+ E+ +KE G C
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513
Query: 398 IPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLCRAGKIESVYE 222
P + N + C+ + G ++ + EE+K + P+ +Y+ILI L +AG YE
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 221 TRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLG 42
+M+ G + NI++D CK KV++A ++ ++M K P +T+ S+IDGL
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 41 RFGRVDEAYSLFE 3
+ R+DEAY LFE
Sbjct: 634 KIDRLDEAYMLFE 646
Score = 156 bits (395), Expect = 7e-36
Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
SQ+L +A + + + P + +LI V A ++++M + N +
Sbjct: 425 SQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIV 484
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+T+LI+ F G+ + + + + D L N +DC K G+ + F E+
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
++ PD +Y+ +I L KA +E +LF +M+ V AYN +I G+ GK +
Sbjct: 545 SRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
+AY+LLE K KG P+V+ Y ++ L + R+DEA + EE K K + N+ Y+ LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 263 DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
D + G+I+ Y + + + GL PNV T N ++D L KA++++EA F+ M + CT
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 83 PDKITFCSLIDGLGRFGRVDEAYSLFE 3
P+++T+ LI+GL + + ++A+ ++
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQ 751
Score = 106 bits (264), Expect = 1e-20
Identities = 58/224 (25%), Positives = 107/224 (47%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
++ A+ L++ ++ F P Y ++I A + A LF++ + E+N+ +++
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
+LI F K G++D A +L+++ + +N +D K +++ A F M
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
P+ VTY +I LCK ++ ++A ++ M+ P +Y TMI G AG EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 434 YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
L +R K G +P YN ++ L R +A + EE ++
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Score = 92.8 bits (229), Expect = 1e-16
Identities = 53/191 (27%), Positives = 93/191 (48%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
RL +A+ L + + + Y++LI F V A + +++ + G N+ +
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN 696
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
+L+ K +++ AL +K + V Y + I+ KV K + A+ F+ EM Q
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
G+ P ++YT+MI L KA + EA LF+ + N VP + YN MI G + + +A
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Query: 434 YKLLERQKEKG 402
+ L E + +G
Sbjct: 817 FSLFEETRRRG 827
Score = 62.4 bits (150), Expect = 2e-07
Identities = 41/154 (26%), Positives = 71/154 (46%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
L+ V ++ + +A QS+++ K P Y LI V + A +Q+MQ+ G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
+ + +TT+I AK G + A AL D+ K++ D+ YN I+ + A+
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
F E +GL + T ++ L K L++A
Sbjct: 818 SLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851
>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like
[Vitis vinifera]
Length = 898
Score = 526 bits (1354), Expect = e-147
Identities = 256/340 (75%), Positives = 295/340 (86%)
Frame = -1
Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
S+N IELV CV S++L++AF++IQ++RKFKFRPAFSAYT LIGA + V EP L LF
Sbjct: 159 SSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILF 218
Query: 842 QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
QMQELGYEVN+ LFTTLIRVFA+EG+VDAAL+LLD++KS++ +AD VLYNVCIDCFGK
Sbjct: 219 HQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKA 278
Query: 662 GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
GKVDM+WKFFHEM + GL PDDVTYTSMIGVLCKA RLDEAV+LFE +E NR+VPCAYAY
Sbjct: 279 GKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAY 338
Query: 482 NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
NTMIMGYGSAGKFDEAY LLERQK KG IPSVIAYNCILTCLG+K RV+EALRI EEMK+
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398
Query: 302 DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
DA PN+ TYNILIDMLCR GK+ + E RD MERAGLFPNVLTVNIM+DRLCKAQK++EA
Sbjct: 399 DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 458
Query: 122 CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
C IF+ M K CTP+ +TF SLIDGLG+ GRVD+AYSL+E
Sbjct: 459 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 498
Score = 171 bits (433), Expect = 3e-40
Identities = 101/327 (30%), Positives = 176/327 (53%), Gaps = 1/327 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
+Q+L++A ++ + + P +++LI A +L+++M + G+ +
Sbjct: 452 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 511
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+T+LIR F K G+ + + ++ D L N +DC K G+ + F E+N
Sbjct: 512 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
A G PD +Y+ +I L KA +E +LF M+ V +AYN +I G+ +GK +
Sbjct: 572 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDA-KPNLSTYNILI 264
+AY+LLE K KG P+V+ Y ++ L + R+DEA + EE K + K N+ Y+ LI
Sbjct: 632 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 691
Query: 263 DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
D + G+I+ Y + + + GL PNV T N ++D L KA++++EA F+ M C
Sbjct: 692 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 751
Query: 83 PDKITFCSLIDGLGRFGRVDEAYSLFE 3
P++IT+ LI+GL R + ++A+ ++
Sbjct: 752 PNQITYSILINGLCRVRKFNKAFVFWQ 778
Score = 167 bits (424), Expect = 3e-39
Identities = 109/360 (30%), Positives = 166/360 (46%), Gaps = 36/360 (10%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
R+ DA++L + + P YT+LI +F ++++M G ++ L
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAF--------------------------------- 714
T + K G+ + AL ++ +H F
Sbjct: 549 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608
Query: 713 --EADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
DT YN ID F K GKV+ A++ EM +G P VTY S+I L K RLDEA
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668
Query: 539 VDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTC 360
LFE + N Y+++I G+G G+ DEAY ++E +KG P+V +NC+L
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728
Query: 359 LGRKGRVDEALRIIEEMKK-DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPN 183
L + ++EAL + MK PN TY+ILI+ LCR K + M++ GL PN
Sbjct: 729 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 788
Query: 182 VLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
+T M+ L KA + EA +F PD ++ ++I+GL + +AY+LFE
Sbjct: 789 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 848
Score = 152 bits (385), Expect = 1e-34
Identities = 99/373 (26%), Positives = 176/373 (47%), Gaps = 36/373 (9%)
Frame = -1
Query: 1013 TCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQM 834
T ++ + + RL +A L + + + + P AY T+I + + A L ++
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361
Query: 833 QELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKV 654
+ G ++ + ++ K+ +V+ AL + +++K A + YN+ ID + GK+
Sbjct: 362 KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKL 420
Query: 653 DMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTM 474
+ A + +M GL P+ +T MI LCKA++L+EA +FE M+ P A ++++
Sbjct: 421 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480
Query: 473 IMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDA- 297
I G G G+ D+AY L E+ + G +P I Y ++ + GR ++ +I +EM
Sbjct: 481 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 540
Query: 296 -----------------------------------KPNLSTYNILIDMLCRAGKIESVYE 222
P+ +Y+ILI L +AG YE
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 600
Query: 221 TRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLG 42
M+ G + N ++D CK+ KV++A ++ ++M K P +T+ S+IDGL
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660
Query: 41 RFGRVDEAYSLFE 3
+ R+DEAY LFE
Sbjct: 661 KIDRLDEAYMLFE 673
Score = 121 bits (304), Expect = 2e-25
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 1/313 (0%)
Frame = -1
Query: 953 LIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFA 774
L + I F P +Y+ LI LF M+E G ++ + +I F
Sbjct: 566 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 625
Query: 773 KEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDV 594
K G+V+ A LL+++K V Y ID K+ ++D A+ F E + G+ + V
Sbjct: 626 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685
Query: 593 TYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQ 414
Y+S+I K R+DEA + E + P Y +N ++ A + +EA +
Sbjct: 686 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745
Query: 413 KEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNILIDMLCRAGKI 237
K+ C P+ I Y+ ++ L R + ++A +EM+K KPN TY +I L +AG I
Sbjct: 746 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 805
Query: 236 ESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSL 57
+ G P+ + N M++ L A K +A +F++ K C T L
Sbjct: 806 LEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVL 865
Query: 56 IDGLGRFGRVDEA 18
+D L + +++A
Sbjct: 866 LDALHKAECLEQA 878
Score = 100 bits (250), Expect = 4e-19
Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
S ++ A+ L++ ++ P Y ++I A + A LF++ + G ++N+ +
Sbjct: 627 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 686
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+++LI F K G++D A +++++ + +N +D K +++ A F M
Sbjct: 687 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 746
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
P+ +TY+ +I LC+ ++ ++A ++ M+ P Y TMI G AG
Sbjct: 747 DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 806
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
EA L R K G IP +YN ++ L + +A + EE + K + T +L+
Sbjct: 807 EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLL 866
Query: 263 DMLCRAGKIE 234
D L +A +E
Sbjct: 867 DALHKAECLE 876
Score = 99.4 bits (246), Expect = 1e-18
Identities = 63/227 (27%), Positives = 109/227 (48%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
RL +A+ L + + + Y++LI F V A + +++ + G N+ +
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
L+ K +++ AL +K + + Y++ I+ +V K + A+ F+ EM
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
GL P+ +TYT+MI L KA + EA LF + N +P + +YN MI G SA K +A
Sbjct: 784 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 843
Query: 434 YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDAK 294
Y L E + KGC +L L + +++A + +K+ AK
Sbjct: 844 YALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAK 890
Score = 81.6 bits (200), Expect = 3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Frame = -1
Query: 581 MIGVLCKAKRLDEAVDLFETMELN-RRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEK 405
+IGVL + K + AV+ F+ E +V C AYN+++M +FD ++LE
Sbjct: 95 VIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLS 154
Query: 404 GCIPSV-IAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNILIDML-------- 255
G PS I+ + C+ + ++ EA II+ M+K +P S Y ILI L
Sbjct: 155 GFGPSSNISIELVANCV-KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDP 213
Query: 254 ---------------------------CRAGKIESVYETRDTMERAGLFPNVLTVNIMVD 156
R G++++ D M+ L +++ N+ +D
Sbjct: 214 MLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCID 273
Query: 155 RLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
KA KVD + + F +M PD +T+ S+I L + R+DEA LFE
Sbjct: 274 CFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324
Score = 64.7 bits (156), Expect = 3e-08
Identities = 42/154 (27%), Positives = 70/154 (45%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
L+ V ++ + +A QS++ K P Y+ LI V + A +Q+MQ+LG
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
+ N +TT+I AK G + A L + K++ D+ YN I+ K A+
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
F E +G T ++ L KA+ L++A
Sbjct: 845 ALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878
>ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g06920 gi|6728999|gb|AAF26996.1|AC016827_7
hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 523 bits (1348), Expect = e-146
Identities = 249/340 (73%), Positives = 297/340 (87%)
Frame = -1
Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
S NTCIE+V CV + +L++ ++++Q +RKFKFRPAFSAYTTLIGAF+ V+ + LTLF
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 842 QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
QQMQELGYE + LFTTLIR FAKEG+VD+AL+LLD++KS + +AD VLYNVCID FGKV
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 662 GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
GKVDMAWKFFHE+ A GL PD+VTYTSMIGVLCKA RLDEAV++FE +E NRRVPC YAY
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 482 NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
NTMIMGYGSAGKFDEAY LLERQ+ KG IPSVIAYNCILTCL + G+VDEAL++ EEMKK
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 302 DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
DA PNLSTYNILIDMLCRAGK+++ +E RD+M++AGLFPNV TVNIMVDRLCK+QK+DEA
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 122 CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
C +F++M K CTPD+ITFCSLIDGLG+ GRVD+AY ++E
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Score = 163 bits (413), Expect = 5e-38
Identities = 99/328 (30%), Positives = 157/328 (47%), Gaps = 1/328 (0%)
Frame = -1
Query: 983 NSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQ 804
N R +D + + + P T + EP +F++++ + + +
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 803 LFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEM 624
++ LI K G + L +K DT YN+ ID F K GKV+ A++ EM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 623 NAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKF 444
+G P VTY S+I L K RLDEA LFE + R Y+++I G+G G+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 443 DEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNIL 267
DEAY +LE +KG P++ +N +L L + ++EAL + MK+ PN TY IL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 266 IDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSC 87
I+ LC+ K + M++ G+ P+ ++ M+ L KA + EA +F
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 86 TPDKITFCSLIDGLGRFGRVDEAYSLFE 3
PD + ++I+GL R +A+SLFE
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 158 bits (400), Expect = 2e-36
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 36/373 (9%)
Frame = -1
Query: 1013 TCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQM 834
T ++ + + RL +A + + + K + P AY T+I + + A +L ++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 833 QELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKV 654
+ G ++ + ++ K G+VD AL + +++K A + YN+ ID + GK+
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKL 393
Query: 653 DMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTM 474
D A++ M GL P+ T M+ LCK+++LDEA +FE M+ P + ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 473 IMGYGSAGKFDEAYKLLER------------------------QKEKG-----------C 399
I G G G+ D+AYK+ E+ +KE G C
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 398 IPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLCRAGKIESVYE 222
P + N + C+ + G ++ + EE+K + P+ +Y+ILI L +AG YE
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 221 TRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLG 42
+M+ G + NI++D CK KV++A ++ ++M K P +T+ S+IDGL
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 41 RFGRVDEAYSLFE 3
+ R+DEAY LFE
Sbjct: 634 KIDRLDEAYMLFE 646
Score = 155 bits (393), Expect = 1e-35
Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)
Frame = -1
Query: 980 SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
SQ+L +A + + + P + +LI V A ++++M + N +
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 800 FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
+T+LI+ F G+ + + + + D L N +DC K G+ + F E+
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 620 AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
A+ PD +Y+ +I L KA +E +LF +M+ V AYN +I G+ GK +
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 440 EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
+AY+LLE K KG P+V+ Y ++ L + R+DEA + EE K K + N+ Y+ LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 263 DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
D + G+I+ Y + + + GL PN+ T N ++D L KA++++EA F+ M + CT
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 83 PDKITFCSLIDGLGRFGRVDEAYSLFE 3
P+++T+ LI+GL + + ++A+ ++
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQ 751
Score = 108 bits (270), Expect = 2e-21
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Frame = -1
Query: 974 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
++ A+ L++ ++ F P Y ++I A + A LF++ + E+N+ +++
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 794 TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
+LI F K G++D A +L+++ + +N +D K +++ A F M
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 614 GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
P+ VTY +I LCK ++ ++A ++ M+ P +Y TMI G AG EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 434 YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDAKP-NLSTYNILIDM 258
L +R K G +P YN ++ L R +A + EE ++ P + T +L+D
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841
Query: 257 L 255
L
Sbjct: 842 L 842
Score = 62.8 bits (151), Expect = 1e-07
Identities = 41/154 (26%), Positives = 71/154 (46%)
Frame = -1
Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
L+ V ++ + +A QS+++ K P Y LI V + A +Q+MQ+ G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 821 YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
+ + +TT+I AK G + A AL D+ K++ D+ YN I+ + A+
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 641 KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
F E +GL + T ++ L K L++A
Sbjct: 818 SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851