BLASTX nr result

ID: Coptis24_contig00025944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025944
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516925.1| pentatricopeptide repeat-containing protein,...   530   e-148
ref|XP_003617758.1| Pentatricopeptide repeat-containing protein ...   528   e-148
ref|XP_002882500.1| pentatricopeptide repeat-containing protein ...   527   e-147
ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...   526   e-147
ref|NP_187348.1| pentatricopeptide repeat-containing protein [Ar...   523   e-146

>ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544013|gb|EEF45539.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 901

 Score =  530 bits (1364), Expect = e-148
 Identities = 249/340 (73%), Positives = 294/340 (86%)
 Frame = -1

Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
            S  TCIEL+  C+ S +L++ F+LIQ +RKFKFRPAFSAYTTLIGA + V E  + LTLF
Sbjct: 162  STKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLF 221

Query: 842  QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
             QMQELGYEV++ LFTT+IRVFA+EG++DAAL+LLD++KS+   AD VLYNVCIDCFGK 
Sbjct: 222  HQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKA 281

Query: 662  GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
            GKVDMAWKFFHE+ + GL PDDVTYTSMIGVLCK  RLDEAV++FE ME NR VPCAYAY
Sbjct: 282  GKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAY 341

Query: 482  NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
            NTMIMGYGSAGKFDEAY LLERQK +GCIPSVIAYNCILTCLG+KGR+ EALR  EEMKK
Sbjct: 342  NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK 401

Query: 302  DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
            DA PNLSTYN+LIDMLC+AG++E+ ++ RD M+ AGLFPNV+TVNIM+DRLCKA+K+DEA
Sbjct: 402  DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEA 461

Query: 122  CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            C IF+ M  K C+PD++TFCSLIDGLG+ GRVD+AY L+E
Sbjct: 462  CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501



 Score =  171 bits (433), Expect = 3e-40
 Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 1/290 (0%)
 Frame = -1

Query: 869  EPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYN 690
            E G    LF++++  G+  ++  ++ LI    K G       L   +K      DT  YN
Sbjct: 562  ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621

Query: 689  VCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELN 510
              ID F K GKV+ A++   EM  +G  P  VTY S+I  L K  RLDEA  LFE  + N
Sbjct: 622  TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 509  RRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEA 330
                    Y+++I G+G  G+ DEAY ++E   +KG  P+V  +NC+L  L +   ++EA
Sbjct: 682  GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 329  LRIIEEMKK-DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDR 153
            L   + MK     PN  TY+ILI+ LCR  K    +     M++ GL PN +T   M+  
Sbjct: 742  LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 152  LCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            L KA  + EA  +F+        PD  ++ ++I+GL    R  EAY +FE
Sbjct: 802  LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE 851



 Score =  163 bits (413), Expect = 5e-38
 Identities = 95/325 (29%), Positives = 169/325 (52%), Gaps = 1/325 (0%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            +  +A++L++  +     P+  AY  ++         G AL  F++M++     N+  + 
Sbjct: 353  KFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYN 411

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
             LI +  K G+V+AA  + D +K      + +  N+ ID   K  K+D A   F  MN +
Sbjct: 412  VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
              +PD+VT+ S+I  L K  R+D+A  L+E M  + ++P A  Y ++I  +   G+ ++ 
Sbjct: 472  ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531

Query: 434  YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDM 258
            +K+ +    +GC P +   N  + C+ + G   +   + EE+K +   P++ +Y+ILI  
Sbjct: 532  HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591

Query: 257  LCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPD 78
            L +AG     YE    M+  G   +    N  +D  CK+ KV++A ++ ++M  K   P 
Sbjct: 592  LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651

Query: 77   KITFCSLIDGLGRFGRVDEAYSLFE 3
             +T+ S+IDGL +  R+DEAY LFE
Sbjct: 652  VVTYGSVIDGLAKIDRLDEAYMLFE 676



 Score =  157 bits (397), Expect = 4e-36
 Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            +++L +A ++ + +      P    + +LI           A  L++QM +     N  +
Sbjct: 455  AKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV 514

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +T+LI+ F K G+ +    +  ++       D  L N  +DC  K G+       F E+ 
Sbjct: 515  YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK 574

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
            ++G  PD ++Y+ +I  L KA    E  +LF  M+    V   +AYNT I G+  +GK +
Sbjct: 575  SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDA-KPNLSTYNILI 264
            +AY+LLE  K KG  P+V+ Y  ++  L +  R+DEA  + EE K +  + N+  Y+ LI
Sbjct: 635  KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694

Query: 263  DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
            D   + G+I+  Y   + + + GL PNV T N ++D L KA++++EA   F++M     T
Sbjct: 695  DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGT 754

Query: 83   PDKITFCSLIDGLGRFGRVDEAYSLFE 3
            P+ IT+  LI+GL R  + ++A+  ++
Sbjct: 755  PNHITYSILINGLCRVRKFNKAFVFWQ 781



 Score =  130 bits (328), Expect = 4e-28
 Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 36/369 (9%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            ++T      RL +A    + ++K    P  S Y  LI       E   A  +   M+E G
Sbjct: 379  ILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
               N+     +I    K  ++D A ++ + +       D V +   ID  GK G+VD A+
Sbjct: 438  LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETM------------------- 519
            + + +M      P+ V YTS+I    K  R ++   +F+ M                   
Sbjct: 498  RLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCV 557

Query: 518  --------------ELNRR--VPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSV 387
                          E+  R  +P   +Y+ +I G   AG   E Y+L    KE+GC+   
Sbjct: 558  FKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDT 617

Query: 386  IAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLCRAGKIESVYETRDT 210
             AYN  +    + G+V++A +++EEMK K  +P + TY  +ID L +  +++  Y   + 
Sbjct: 618  HAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 677

Query: 209  MERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGR 30
             +  GL  NV+  + ++D   K  ++DEA  I +++ QK  TP+  T+  L+D L +   
Sbjct: 678  AKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 737

Query: 29   VDEAYSLFE 3
            ++EA   F+
Sbjct: 738  INEALVCFQ 746



 Score =  119 bits (297), Expect = 2e-24
 Identities = 70/263 (26%), Positives = 135/263 (51%), Gaps = 1/263 (0%)
 Frame = -1

Query: 908  AYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKV 729
            AY T I  F    +   A  L ++M+  G +  +  + ++I   AK  ++D A  L ++ 
Sbjct: 619  AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678

Query: 728  KSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRL 549
            KS+  E + V+Y+  ID FGKVG++D A+    E+  +GL P+  T+  ++  L KA+ +
Sbjct: 679  KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 738

Query: 548  DEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCI 369
            +EA+  F+ M+  +  P    Y+ +I G     KF++A+   +  +++G  P+ I Y  +
Sbjct: 739  NEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTM 798

Query: 368  LTCLGRKGRVDEALRIIEEMKKD-AKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGL 192
            +  L + G + EA  + E  K +   P+ ++YN +I+ L  + +    Y+  +     G 
Sbjct: 799  IAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGC 858

Query: 191  FPNVLTVNIMVDRLCKAQKVDEA 123
              +  T   ++D L K + +++A
Sbjct: 859  NIHTKTCIALLDALQKDECLEQA 881



 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
 Frame = -1

Query: 695 YNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETME 516
           Y+  +    K  K D   +   EM+  G  P   T   +I    K+ +L E  DL + M 
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR 190

Query: 515 LNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVD 336
             +  P   AY T+I    S  + D    L  + +E G   SV  +  ++    R+GR+D
Sbjct: 191 KFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLD 250

Query: 335 EALRIIEEMKKDA-KPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMV 159
            AL +++EMK +    ++  YN+ ID   +AGK++  ++    ++  GL P+ +T   M+
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310

Query: 158 DRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
             LCK  ++DEA  IF+ M Q    P    + ++I G G  G+ DEAYSL E
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE 362



 Score =  108 bits (269), Expect = 3e-21
 Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            S ++  A+ L++ ++    +P    Y ++I   A +     A  LF++ +  G E+N+ +
Sbjct: 630  SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +++LI  F K G++D A  +++++       +   +N  +D   K  +++ A   F  M 
Sbjct: 690  YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
                 P+ +TY+ +I  LC+ ++ ++A   ++ M+     P    Y TMI G   AG   
Sbjct: 750  NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIA 809

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
            EA  L ER K  G +P   +YN I+  L    R  EA +I EE + K    +  T   L+
Sbjct: 810  EASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALL 869

Query: 263  DML 255
            D L
Sbjct: 870  DAL 872



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 38/245 (15%)
 Frame = -1

Query: 623 NAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNR-RVPCAYAYNTMIMGYGSAGK 447
           NA  L  +      +IGVL +AK +++A+  F   E    +  C  AY+++++      K
Sbjct: 84  NALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVK 143

Query: 446 FDEAYKLLERQKEKGCIPSV-IAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYN 273
           FD   ++L      G  PS       IL+C+ +  ++ E   +I+ M+K   +P  S Y 
Sbjct: 144 FDYFEQILGEMSIAGFGPSTKTCIELILSCI-KSNKLREGFDLIQCMRKFKFRPAFSAYT 202

Query: 272 ILIDML-----------------------------------CRAGKIESVYETRDTMERA 198
            LI  L                                    R G++++     D M+  
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN 262

Query: 197 GLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEA 18
            L  +++  N+ +D   KA KVD A + F ++      PD +T+ S+I  L +  R+DEA
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322

Query: 17  YSLFE 3
             +FE
Sbjct: 323 VEIFE 327



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 39/154 (25%), Positives = 72/154 (46%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            L+   V ++ + +A    Q+++  K  P    Y+ LI     V +   A   +Q+MQ+ G
Sbjct: 728  LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
             + N   +TT+I   AK G +  A +L ++ K++    D+  YN  I+      +   A+
Sbjct: 788  LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
            K F E   +G      T  +++  L K + L++A
Sbjct: 848  KIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881


>ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355519093|gb|AET00717.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  528 bits (1361), Expect = e-148
 Identities = 250/340 (73%), Positives = 297/340 (87%)
 Frame = -1

Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
            SN+  +ELV   V S +LK+AF +I+ +RKFKFRPAFSAYTTLIGA +  + P   LTLF
Sbjct: 167  SNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLF 226

Query: 842  QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
             QMQE+GYE N+ LFTTL+RVFA+EG++DAAL+LLD++KS++F AD VLYNVCIDCFGKV
Sbjct: 227  HQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKV 286

Query: 662  GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
            GKVDMAWKFFHEM AQGL PDDVTYT++IGVLCKA+RLDEAV+LFE ++LNR VPC YAY
Sbjct: 287  GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346

Query: 482  NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
            NTMIMGYGSAGKFDEAY LLERQK KGCIPSVIAYNCILTCLGRKG+V+EALRI +EM++
Sbjct: 347  NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406

Query: 302  DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
            DA PNL+TYNILIDMLC+AG++E+  + +DTM+ AGLFPN++TVNIM+DRLCKAQK+DEA
Sbjct: 407  DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466

Query: 122  CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            C IF  +  K C+PD  TFCSLIDGLGR GRVD+AYSL+E
Sbjct: 467  CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYE 506



 Score =  165 bits (417), Expect = 2e-38
 Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 1/325 (0%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            R+ DA++L + +      P    YT+LI  F           ++++M   G   ++ L  
Sbjct: 497  RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLN 556

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
            + +    K G+V+   AL +++K+     D   Y++ I    K G     +K F+EM  Q
Sbjct: 557  SYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQ 616

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
            GL  D + Y ++I   CK+ ++D+A  L E M+     P    Y +++ G     + DEA
Sbjct: 617  GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676

Query: 434  YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEE-MKKDAKPNLSTYNILIDM 258
            Y L E  K  G   +V+ Y+ ++   G+ GR+DEA  I+EE M+K   PN  T+N L+D 
Sbjct: 677  YMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736

Query: 257  LCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPD 78
            L +A +I+        M+     PN +T +IM++ LC  +K ++A   +++M ++   P+
Sbjct: 737  LVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPN 796

Query: 77   KITFCSLIDGLGRFGRVDEAYSLFE 3
             IT+ ++I GL + G V EA  LF+
Sbjct: 797  NITYTTMIAGLAKAGNVMEARGLFD 821



 Score =  160 bits (406), Expect = 4e-37
 Identities = 91/325 (28%), Positives = 174/325 (53%), Gaps = 1/325 (0%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            +  +A++L++  ++    P+  AY  ++       +   AL +  +M++     N+  + 
Sbjct: 358  KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYN 416

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
             LI +  K G+++AAL + D +K      + +  N+ ID   K  K+D A   F  ++ +
Sbjct: 417  ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
              +PD  T+ S+I  L +  R+D+A  L+E M  + ++P    Y ++I  +   G+ ++ 
Sbjct: 477  VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536

Query: 434  YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDM 258
            +K+ +    +GC P ++  N  + C+ + G V++   + EE+K +   P++ +Y+ILI  
Sbjct: 537  HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 257  LCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPD 78
            L +AG     Y+    M+  GL  +VL  N ++D  CK+ KVD+A ++ ++M  K   P 
Sbjct: 597  LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 77   KITFCSLIDGLGRFGRVDEAYSLFE 3
             +T+ S++DGL +  R+DEAY LFE
Sbjct: 657  VVTYGSVVDGLAKIDRLDEAYMLFE 681



 Score =  159 bits (401), Expect = 1e-36
 Identities = 95/283 (33%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
 Frame = -1

Query: 848  LFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFG 669
            LF++++  G   +++ ++ LI    K G       L  ++K      D + YN  ID F 
Sbjct: 574  LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633

Query: 668  KVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAY 489
            K GKVD A++   EM  +GL P  VTY S++  L K  RLDEA  LFE  +         
Sbjct: 634  KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693

Query: 488  AYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEM 309
             Y+++I G+G  G+ DEAY +LE   +KG  P+   +NC+L  L +   +DEA    + M
Sbjct: 694  IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753

Query: 308  KK-DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKV 132
            K     PN  TY+I+I+ LC   K    +     M++ GL PN +T   M+  L KA  V
Sbjct: 754  KNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNV 813

Query: 131  DEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
             EA  +F         PD   + ++I+GL    +  +AY +FE
Sbjct: 814  MEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFE 856



 Score =  137 bits (345), Expect = 4e-30
 Identities = 88/334 (26%), Positives = 164/334 (49%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            L+ +   +  L+ A  +  ++++    P       +I       +   A ++F  +    
Sbjct: 418  LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
               + + F +LI    + G+VD A +L +K+       + V+Y   I  F K G+ +   
Sbjct: 478  CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGY 462
            K + EM  +G +PD +   S +  + KA  +++   LFE ++    VP   +Y+ +I G 
Sbjct: 538  KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597

Query: 461  GSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNL 285
              AG   E YKL    KE+G    V+AYN ++    + G+VD+A +++EEMK K  +P +
Sbjct: 598  VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657

Query: 284  STYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKD 105
             TY  ++D L +  +++  Y   +  +  G+  NV+  + ++D   K  ++DEA  I ++
Sbjct: 658  VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717

Query: 104  MAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            + QK  TP+  T+  L+D L +   +DEA   F+
Sbjct: 718  LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751



 Score =  123 bits (309), Expect = 6e-26
 Identities = 78/295 (26%), Positives = 146/295 (49%), Gaps = 4/295 (1%)
 Frame = -1

Query: 968  KDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFTTL 789
            ++ + L   +++        AY T+I  F    +   A  L ++M+  G +  +  + ++
Sbjct: 604  RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 788  IRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGL 609
            +   AK  ++D A  L ++ KS   + + V+Y+  ID FGKVG++D A+    E+  +GL
Sbjct: 664  VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 608  APDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYK 429
             P+  T+  ++  L KA+ +DEA   F+ M+  +  P A  Y+ MI G     KF++A+ 
Sbjct: 724  TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783

Query: 428  LLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLC 252
              +  +++G  P+ I Y  ++  L + G V EA  + +  K     P+ + YN +I+ L 
Sbjct: 784  FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843

Query: 251  RAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEAC---RIFKDMAQ 96
             A K    Y   +     G   N  T  +++D L KA  +++A     + ++MA+
Sbjct: 844  SANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898



 Score =  110 bits (274), Expect = 7e-22
 Identities = 64/250 (25%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            S ++  A+ L++ ++    +P    Y +++   A +     A  LF++ + +G ++N+ +
Sbjct: 635  SGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +++LI  F K G++D A  +L+++       ++  +N  +D   K  ++D A   F  M 
Sbjct: 695  YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
                +P+ +TY+ MI  LC  ++ ++A   ++ M+     P    Y TMI G   AG   
Sbjct: 755  NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
            EA  L +R K  G +P    YN ++  L    +  +A  + EE + K  + N  T  +L+
Sbjct: 815  EARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLL 874

Query: 263  DMLCRAGKIE 234
            D L +A  +E
Sbjct: 875  DALHKADCLE 884



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 40/154 (25%), Positives = 70/154 (45%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            L+   V ++ + +A    Q+++  K  P    Y+ +I    ++ +   A   +Q+MQ+ G
Sbjct: 733  LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
             + N   +TT+I   AK G V  A  L D+ K+     D+  YN  I+      K   A+
Sbjct: 793  LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAY 852

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
              F E   +G   +  T   ++  L KA  L++A
Sbjct: 853  IVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886


>ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297328340|gb|EFH58759.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 871

 Score =  527 bits (1358), Expect = e-147
 Identities = 252/340 (74%), Positives = 296/340 (87%)
 Frame = -1

Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
            S NTCIE+V  CV + +L++ F+++Q++RKFKFRPAFSAYTTLIGAF+ V+   + LTLF
Sbjct: 132  SVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191

Query: 842  QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
            QQMQELGYE  + LFTTLIR FAKEG+VD+AL+LLD++KS + +AD VLYNVCID FGKV
Sbjct: 192  QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251

Query: 662  GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
            GKVDMAWKFFHE+ A GL PD+VTYTSMIGVLCKA RLDEAV++FE +E NRRVPC YAY
Sbjct: 252  GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311

Query: 482  NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
            NTMIMGYGSAGKFDEAY LLERQ+ KG IPSVIAYNCILTCL + G+VDEALR+ EEMKK
Sbjct: 312  NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK 371

Query: 302  DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
            DA PNLSTYNILIDMLCRAGK++  +E RD+M++AGLFPNV TVNIMVDRLCK+QK+DEA
Sbjct: 372  DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431

Query: 122  CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            C IF+ M  K CTPD+ITFCSLIDGLG+ GRVD+AY ++E
Sbjct: 432  CAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYE 471



 Score =  165 bits (417), Expect = 2e-38
 Identities = 100/328 (30%), Positives = 157/328 (47%), Gaps = 1/328 (0%)
 Frame = -1

Query: 983  NSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQ 804
            N  R +D   + + +      P      T +       EP     +F++++   +  + +
Sbjct: 494  NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553

Query: 803  LFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEM 624
             ++ LI    K G  +    L   +K      DT  YN+ ID F K GKV+ A++   EM
Sbjct: 554  SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613

Query: 623  NAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKF 444
              +G  P  VTY S+I  L K  RLDEA  LFE  +  R       Y+++I G+G  G+ 
Sbjct: 614  KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673

Query: 443  DEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNIL 267
            DEAY +LE   +KG  P+V  +N +L  L +   ++EAL   + MK+    PN  TY IL
Sbjct: 674  DEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733

Query: 266  IDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSC 87
            I+ LC+  K    +     M++ G+ P+ ++   M+  L KA  + EA  +F        
Sbjct: 734  INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793

Query: 86   TPDKITFCSLIDGLGRFGRVDEAYSLFE 3
             PD   + ++I+GL    R  +A+SLFE
Sbjct: 794  VPDSACYNAMIEGLSNGNRAMDAFSLFE 821



 Score =  159 bits (401), Expect = 1e-36
 Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 36/373 (9%)
 Frame = -1

Query: 1013 TCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQM 834
            T   ++ +   + RL +A  + + + K +  P   AY T+I  +    +   A +L ++ 
Sbjct: 275  TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 833  QELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKV 654
            +  G   ++  +  ++    K G+VD AL + +++K  A   +   YN+ ID   + GK+
Sbjct: 335  RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKL 393

Query: 653  DMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTM 474
            D A++    M   GL P+  T   M+  LCK+++LDEA  +FE M+     P    + ++
Sbjct: 394  DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 473  IMGYGSAGKFDEAYKLLER------------------------QKEKG-----------C 399
            I G G  G+ D+AYK+ E+                        +KE G           C
Sbjct: 454  IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 398  IPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLCRAGKIESVYE 222
             P +   N  + C+ + G  ++   + EE+K +   P+  +Y+ILI  L +AG     YE
Sbjct: 514  SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 221  TRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLG 42
               +M+  G   +    NI++D  CK  KV++A ++ ++M  K   P  +T+ S+IDGL 
Sbjct: 574  LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 41   RFGRVDEAYSLFE 3
            +  R+DEAY LFE
Sbjct: 634  KIDRLDEAYMLFE 646



 Score =  156 bits (395), Expect = 7e-36
 Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            SQ+L +A  + + +      P    + +LI     V     A  ++++M +     N  +
Sbjct: 425  SQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIV 484

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +T+LI+ F   G+ +    +   + +     D  L N  +DC  K G+ +     F E+ 
Sbjct: 485  YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
            ++   PD  +Y+ +I  L KA   +E  +LF +M+    V    AYN +I G+   GK +
Sbjct: 545  SRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
            +AY+LLE  K KG  P+V+ Y  ++  L +  R+DEA  + EE K K  + N+  Y+ LI
Sbjct: 605  KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664

Query: 263  DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
            D   + G+I+  Y   + + + GL PNV T N ++D L KA++++EA   F+ M +  CT
Sbjct: 665  DGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724

Query: 83   PDKITFCSLIDGLGRFGRVDEAYSLFE 3
            P+++T+  LI+GL +  + ++A+  ++
Sbjct: 725  PNQVTYGILINGLCKVRKFNKAFVFWQ 751



 Score =  106 bits (264), Expect = 1e-20
 Identities = 58/224 (25%), Positives = 107/224 (47%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            ++  A+ L++ ++   F P    Y ++I   A +     A  LF++ +    E+N+ +++
Sbjct: 602  KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
            +LI  F K G++D A  +L+++       +   +N  +D   K  +++ A   F  M   
Sbjct: 662  SLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEL 721

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
               P+ VTY  +I  LCK ++ ++A   ++ M+     P   +Y TMI G   AG   EA
Sbjct: 722  KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781

Query: 434  YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
              L +R K  G +P    YN ++  L    R  +A  + EE ++
Sbjct: 782  GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 53/191 (27%), Positives = 93/191 (48%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            RL +A+ L +  +  +       Y++LI  F  V     A  + +++ + G   N+  + 
Sbjct: 637  RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN 696

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
            +L+    K  +++ AL     +K      + V Y + I+   KV K + A+ F+ EM  Q
Sbjct: 697  SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
            G+ P  ++YT+MI  L KA  + EA  LF+  + N  VP +  YN MI G  +  +  +A
Sbjct: 757  GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

Query: 434  YKLLERQKEKG 402
            + L E  + +G
Sbjct: 817  FSLFEETRRRG 827



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 41/154 (26%), Positives = 71/154 (46%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            L+   V ++ + +A    QS+++ K  P    Y  LI     V +   A   +Q+MQ+ G
Sbjct: 698  LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
             + +   +TT+I   AK G +  A AL D+ K++    D+  YN  I+      +   A+
Sbjct: 758  MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
              F E   +GL   + T   ++  L K   L++A
Sbjct: 818  SLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851


>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like
            [Vitis vinifera]
          Length = 898

 Score =  526 bits (1354), Expect = e-147
 Identities = 256/340 (75%), Positives = 295/340 (86%)
 Frame = -1

Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
            S+N  IELV  CV S++L++AF++IQ++RKFKFRPAFSAYT LIGA + V EP   L LF
Sbjct: 159  SSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILF 218

Query: 842  QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
             QMQELGYEVN+ LFTTLIRVFA+EG+VDAAL+LLD++KS++ +AD VLYNVCIDCFGK 
Sbjct: 219  HQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKA 278

Query: 662  GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
            GKVDM+WKFFHEM + GL PDDVTYTSMIGVLCKA RLDEAV+LFE +E NR+VPCAYAY
Sbjct: 279  GKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAY 338

Query: 482  NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
            NTMIMGYGSAGKFDEAY LLERQK KG IPSVIAYNCILTCLG+K RV+EALRI EEMK+
Sbjct: 339  NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398

Query: 302  DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
            DA PN+ TYNILIDMLCR GK+ +  E RD MERAGLFPNVLTVNIM+DRLCKAQK++EA
Sbjct: 399  DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 458

Query: 122  CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            C IF+ M  K CTP+ +TF SLIDGLG+ GRVD+AYSL+E
Sbjct: 459  CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 498



 Score =  171 bits (433), Expect = 3e-40
 Identities = 101/327 (30%), Positives = 176/327 (53%), Gaps = 1/327 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            +Q+L++A ++ + +      P    +++LI           A +L+++M + G+     +
Sbjct: 452  AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 511

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +T+LIR F K G+ +    +  ++       D  L N  +DC  K G+ +     F E+N
Sbjct: 512  YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
            A G  PD  +Y+ +I  L KA   +E  +LF  M+    V   +AYN +I G+  +GK +
Sbjct: 572  AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDA-KPNLSTYNILI 264
            +AY+LLE  K KG  P+V+ Y  ++  L +  R+DEA  + EE K +  K N+  Y+ LI
Sbjct: 632  KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 691

Query: 263  DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
            D   + G+I+  Y   + + + GL PNV T N ++D L KA++++EA   F+ M    C 
Sbjct: 692  DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 751

Query: 83   PDKITFCSLIDGLGRFGRVDEAYSLFE 3
            P++IT+  LI+GL R  + ++A+  ++
Sbjct: 752  PNQITYSILINGLCRVRKFNKAFVFWQ 778



 Score =  167 bits (424), Expect = 3e-39
 Identities = 109/360 (30%), Positives = 166/360 (46%), Gaps = 36/360 (10%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            R+ DA++L + +      P    YT+LI +F           ++++M   G   ++ L  
Sbjct: 489  RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAF--------------------------------- 714
            T +    K G+ +   AL  ++ +H F                                 
Sbjct: 549  TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608

Query: 713  --EADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
                DT  YN  ID F K GKV+ A++   EM  +G  P  VTY S+I  L K  RLDEA
Sbjct: 609  GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668

Query: 539  VDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTC 360
              LFE  + N        Y+++I G+G  G+ DEAY ++E   +KG  P+V  +NC+L  
Sbjct: 669  YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728

Query: 359  LGRKGRVDEALRIIEEMKK-DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPN 183
            L +   ++EAL   + MK     PN  TY+ILI+ LCR  K    +     M++ GL PN
Sbjct: 729  LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 788

Query: 182  VLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
             +T   M+  L KA  + EA  +F         PD  ++ ++I+GL    +  +AY+LFE
Sbjct: 789  TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 848



 Score =  152 bits (385), Expect = 1e-34
 Identities = 99/373 (26%), Positives = 176/373 (47%), Gaps = 36/373 (9%)
 Frame = -1

Query: 1013 TCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQM 834
            T   ++ +   + RL +A  L + + + +  P   AY T+I  +    +   A  L ++ 
Sbjct: 302  TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361

Query: 833  QELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKV 654
            +  G   ++  +  ++    K+ +V+ AL + +++K  A   +   YN+ ID   + GK+
Sbjct: 362  KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKL 420

Query: 653  DMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTM 474
            + A +   +M   GL P+ +T   MI  LCKA++L+EA  +FE M+     P A  ++++
Sbjct: 421  NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480

Query: 473  IMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDA- 297
            I G G  G+ D+AY L E+  + G +P  I Y  ++    + GR ++  +I +EM     
Sbjct: 481  IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 540

Query: 296  -----------------------------------KPNLSTYNILIDMLCRAGKIESVYE 222
                                                P+  +Y+ILI  L +AG     YE
Sbjct: 541  SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 600

Query: 221  TRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLG 42
                M+  G   +    N ++D  CK+ KV++A ++ ++M  K   P  +T+ S+IDGL 
Sbjct: 601  LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660

Query: 41   RFGRVDEAYSLFE 3
            +  R+DEAY LFE
Sbjct: 661  KIDRLDEAYMLFE 673



 Score =  121 bits (304), Expect = 2e-25
 Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 1/313 (0%)
 Frame = -1

Query: 953  LIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFA 774
            L + I    F P   +Y+ LI              LF  M+E G  ++   +  +I  F 
Sbjct: 566  LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 625

Query: 773  KEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQGLAPDDV 594
            K G+V+ A  LL+++K        V Y   ID   K+ ++D A+  F E  + G+  + V
Sbjct: 626  KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685

Query: 593  TYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQ 414
             Y+S+I    K  R+DEA  + E +      P  Y +N ++     A + +EA    +  
Sbjct: 686  VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745

Query: 413  KEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNILIDMLCRAGKI 237
            K+  C P+ I Y+ ++  L R  + ++A    +EM+K   KPN  TY  +I  L +AG I
Sbjct: 746  KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 805

Query: 236  ESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSL 57
                      +  G  P+  + N M++ L  A K  +A  +F++   K C     T   L
Sbjct: 806  LEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVL 865

Query: 56   IDGLGRFGRVDEA 18
            +D L +   +++A
Sbjct: 866  LDALHKAECLEQA 878



 Score =  100 bits (250), Expect = 4e-19
 Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            S ++  A+ L++ ++     P    Y ++I   A +     A  LF++ +  G ++N+ +
Sbjct: 627  SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 686

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +++LI  F K G++D A  +++++       +   +N  +D   K  +++ A   F  M 
Sbjct: 687  YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 746

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
                 P+ +TY+ +I  LC+ ++ ++A   ++ M+     P    Y TMI G   AG   
Sbjct: 747  DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 806

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
            EA  L  R K  G IP   +YN ++  L    +  +A  + EE + K    +  T  +L+
Sbjct: 807  EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLL 866

Query: 263  DMLCRAGKIE 234
            D L +A  +E
Sbjct: 867  DALHKAECLE 876



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 63/227 (27%), Positives = 109/227 (48%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            RL +A+ L +  +    +     Y++LI  F  V     A  + +++ + G   N+  + 
Sbjct: 664  RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
             L+    K  +++ AL     +K      + + Y++ I+   +V K + A+ F+ EM   
Sbjct: 724  CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
            GL P+ +TYT+MI  L KA  + EA  LF   + N  +P + +YN MI G  SA K  +A
Sbjct: 784  GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 843

Query: 434  YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDAK 294
            Y L E  + KGC         +L  L +   +++A  +   +K+ AK
Sbjct: 844  YALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAK 890



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
 Frame = -1

Query: 581 MIGVLCKAKRLDEAVDLFETMELN-RRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEK 405
           +IGVL + K  + AV+ F+  E    +V C  AYN+++M      +FD   ++LE     
Sbjct: 95  VIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLS 154

Query: 404 GCIPSV-IAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNILIDML-------- 255
           G  PS  I+   +  C+ +  ++ EA  II+ M+K   +P  S Y ILI  L        
Sbjct: 155 GFGPSSNISIELVANCV-KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDP 213

Query: 254 ---------------------------CRAGKIESVYETRDTMERAGLFPNVLTVNIMVD 156
                                       R G++++     D M+   L  +++  N+ +D
Sbjct: 214 MLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCID 273

Query: 155 RLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
              KA KVD + + F +M      PD +T+ S+I  L +  R+DEA  LFE
Sbjct: 274 CFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 42/154 (27%), Positives = 70/154 (45%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            L+   V ++ + +A    QS++  K  P    Y+ LI     V +   A   +Q+MQ+LG
Sbjct: 725  LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
             + N   +TT+I   AK G +  A  L  + K++    D+  YN  I+      K   A+
Sbjct: 785  LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
              F E   +G      T   ++  L KA+ L++A
Sbjct: 845  ALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878


>ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75186627|sp|Q9M907.1|PP217_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g06920 gi|6728999|gb|AAF26996.1|AC016827_7
            hypothetical protein [Arabidopsis thaliana]
            gi|332640955|gb|AEE74476.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  523 bits (1348), Expect = e-146
 Identities = 249/340 (73%), Positives = 297/340 (87%)
 Frame = -1

Query: 1022 SNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLF 843
            S NTCIE+V  CV + +L++ ++++Q +RKFKFRPAFSAYTTLIGAF+ V+   + LTLF
Sbjct: 132  SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191

Query: 842  QQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKV 663
            QQMQELGYE  + LFTTLIR FAKEG+VD+AL+LLD++KS + +AD VLYNVCID FGKV
Sbjct: 192  QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251

Query: 662  GKVDMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAY 483
            GKVDMAWKFFHE+ A GL PD+VTYTSMIGVLCKA RLDEAV++FE +E NRRVPC YAY
Sbjct: 252  GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311

Query: 482  NTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK 303
            NTMIMGYGSAGKFDEAY LLERQ+ KG IPSVIAYNCILTCL + G+VDEAL++ EEMKK
Sbjct: 312  NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371

Query: 302  DAKPNLSTYNILIDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEA 123
            DA PNLSTYNILIDMLCRAGK+++ +E RD+M++AGLFPNV TVNIMVDRLCK+QK+DEA
Sbjct: 372  DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431

Query: 122  CRIFKDMAQKSCTPDKITFCSLIDGLGRFGRVDEAYSLFE 3
            C +F++M  K CTPD+ITFCSLIDGLG+ GRVD+AY ++E
Sbjct: 432  CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471



 Score =  163 bits (413), Expect = 5e-38
 Identities = 99/328 (30%), Positives = 157/328 (47%), Gaps = 1/328 (0%)
 Frame = -1

Query: 983  NSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQ 804
            N  R +D   + + +      P      T +       EP     +F++++   +  + +
Sbjct: 494  NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553

Query: 803  LFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEM 624
             ++ LI    K G  +    L   +K      DT  YN+ ID F K GKV+ A++   EM
Sbjct: 554  SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613

Query: 623  NAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKF 444
              +G  P  VTY S+I  L K  RLDEA  LFE  +  R       Y+++I G+G  G+ 
Sbjct: 614  KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673

Query: 443  DEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKK-DAKPNLSTYNIL 267
            DEAY +LE   +KG  P++  +N +L  L +   ++EAL   + MK+    PN  TY IL
Sbjct: 674  DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733

Query: 266  IDMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSC 87
            I+ LC+  K    +     M++ G+ P+ ++   M+  L KA  + EA  +F        
Sbjct: 734  INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793

Query: 86   TPDKITFCSLIDGLGRFGRVDEAYSLFE 3
             PD   + ++I+GL    R  +A+SLFE
Sbjct: 794  VPDSACYNAMIEGLSNGNRAMDAFSLFE 821



 Score =  158 bits (400), Expect = 2e-36
 Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 36/373 (9%)
 Frame = -1

Query: 1013 TCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQM 834
            T   ++ +   + RL +A  + + + K +  P   AY T+I  +    +   A +L ++ 
Sbjct: 275  TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 833  QELGYEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKV 654
            +  G   ++  +  ++    K G+VD AL + +++K  A   +   YN+ ID   + GK+
Sbjct: 335  RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKL 393

Query: 653  DMAWKFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTM 474
            D A++    M   GL P+  T   M+  LCK+++LDEA  +FE M+     P    + ++
Sbjct: 394  DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453

Query: 473  IMGYGSAGKFDEAYKLLER------------------------QKEKG-----------C 399
            I G G  G+ D+AYK+ E+                        +KE G           C
Sbjct: 454  IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513

Query: 398  IPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILIDMLCRAGKIESVYE 222
             P +   N  + C+ + G  ++   + EE+K +   P+  +Y+ILI  L +AG     YE
Sbjct: 514  SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 221  TRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCTPDKITFCSLIDGLG 42
               +M+  G   +    NI++D  CK  KV++A ++ ++M  K   P  +T+ S+IDGL 
Sbjct: 574  LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 41   RFGRVDEAYSLFE 3
            +  R+DEAY LFE
Sbjct: 634  KIDRLDEAYMLFE 646



 Score =  155 bits (393), Expect = 1e-35
 Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)
 Frame = -1

Query: 980  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQL 801
            SQ+L +A  + + +      P    + +LI     V     A  ++++M +     N  +
Sbjct: 425  SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484

Query: 800  FTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMN 621
            +T+LI+ F   G+ +    +   + +     D  L N  +DC  K G+ +     F E+ 
Sbjct: 485  YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544

Query: 620  AQGLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFD 441
            A+   PD  +Y+ +I  L KA   +E  +LF +M+    V    AYN +I G+   GK +
Sbjct: 545  ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604

Query: 440  EAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK-KDAKPNLSTYNILI 264
            +AY+LLE  K KG  P+V+ Y  ++  L +  R+DEA  + EE K K  + N+  Y+ LI
Sbjct: 605  KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664

Query: 263  DMLCRAGKIESVYETRDTMERAGLFPNVLTVNIMVDRLCKAQKVDEACRIFKDMAQKSCT 84
            D   + G+I+  Y   + + + GL PN+ T N ++D L KA++++EA   F+ M +  CT
Sbjct: 665  DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724

Query: 83   PDKITFCSLIDGLGRFGRVDEAYSLFE 3
            P+++T+  LI+GL +  + ++A+  ++
Sbjct: 725  PNQVTYGILINGLCKVRKFNKAFVFWQ 751



 Score =  108 bits (270), Expect = 2e-21
 Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
 Frame = -1

Query: 974  RLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELGYEVNMQLFT 795
            ++  A+ L++ ++   F P    Y ++I   A +     A  LF++ +    E+N+ +++
Sbjct: 602  KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661

Query: 794  TLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAWKFFHEMNAQ 615
            +LI  F K G++D A  +L+++       +   +N  +D   K  +++ A   F  M   
Sbjct: 662  SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721

Query: 614  GLAPDDVTYTSMIGVLCKAKRLDEAVDLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEA 435
               P+ VTY  +I  LCK ++ ++A   ++ M+     P   +Y TMI G   AG   EA
Sbjct: 722  KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781

Query: 434  YKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMKKDAKP-NLSTYNILIDM 258
              L +R K  G +P    YN ++  L    R  +A  + EE ++   P +  T  +L+D 
Sbjct: 782  GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841

Query: 257  L 255
            L
Sbjct: 842  L 842



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 41/154 (26%), Positives = 71/154 (46%)
 Frame = -1

Query: 1001 LVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGAFAVVHEPGLALTLFQQMQELG 822
            L+   V ++ + +A    QS+++ K  P    Y  LI     V +   A   +Q+MQ+ G
Sbjct: 698  LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757

Query: 821  YEVNMQLFTTLIRVFAKEGQVDAALALLDKVKSHAFEADTVLYNVCIDCFGKVGKVDMAW 642
             + +   +TT+I   AK G +  A AL D+ K++    D+  YN  I+      +   A+
Sbjct: 758  MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817

Query: 641  KFFHEMNAQGLAPDDVTYTSMIGVLCKAKRLDEA 540
              F E   +GL   + T   ++  L K   L++A
Sbjct: 818  SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851


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