BLASTX nr result

ID: Coptis24_contig00025927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025927
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory ...    98   1e-18
ref|XP_002306268.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002309933.1| predicted protein [Populus trichocarpa] gi|2...    92   8e-17
ref|XP_002516330.1| expressed protein, putative [Ricinus communi...    91   1e-16
ref|NP_565720.1| inhibitor-3 [Arabidopsis thaliana] gi|20197895|...    91   1e-16

>ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory subunit 11-like [Vitis
           vinifera]
          Length = 124

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 56/91 (61%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
 Frame = +2

Query: 47  MARPTSST------QMGSSNTATITLENPSP---------QQQQTLVLRLSQPLSLKKKV 181
           MARPT +          S+ T T+TLENPSP         QQQ TLVLRL+     KKKV
Sbjct: 1   MARPTRTRTRPRPPSSSSTITTTLTLENPSPSQPQQPQQQQQQTTLVLRLNP----KKKV 56

Query: 182 SWKEGTVDNEFLQRKSSKKCCIFHKEKSFEE 274
           +WKEGTVDNEFLQRKSSKKCCIFHKEK F+E
Sbjct: 57  TWKEGTVDNEFLQRKSSKKCCIFHKEKPFDE 87


>ref|XP_002306268.1| predicted protein [Populus trichocarpa] gi|222855717|gb|EEE93264.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 50/90 (55%), Positives = 58/90 (64%)
 Frame = +2

Query: 80  SSNTATITLENPSPQQQQTLVLRLSQPLSLKKKVSWKEGTVDNEFLQRKSSKKCCIFHKE 259
           SS+T T  LEN + QQQQTL LRL++P   KKKVSWKEGTVDNE++Q+KSSK CCIFHKE
Sbjct: 16  SSSTTTTFLENLTRQQQQTLTLRLNRP---KKKVSWKEGTVDNEYMQKKSSKICCIFHKE 72

Query: 260 KSFEEXXXXXXXXXXXXCQSEKHSQANGGG 349
           K F+E                  S  N GG
Sbjct: 73  KPFDEDDSDDDCNHDHKSDGACSSSQNNGG 102


>ref|XP_002309933.1| predicted protein [Populus trichocarpa] gi|222852836|gb|EEE90383.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +2

Query: 83  SNTATITLENPSPQQQQTLVLRLSQPLSLKKKVSWKEGTVDNEFLQRKSSKKCCIFHKEK 262
           ++  T  LENP+ QQ QTL LRL++P   KKKVSWKEGTVDNEF+Q+KSSK CCIFHKEK
Sbjct: 20  ASATTTILENPTQQQPQTLTLRLNRP---KKKVSWKEGTVDNEFMQKKSSKICCIFHKEK 76

Query: 263 SFEE 274
            F+E
Sbjct: 77  PFDE 80


>ref|XP_002516330.1| expressed protein, putative [Ricinus communis]
           gi|223544560|gb|EEF46077.1| expressed protein, putative
           [Ricinus communis]
          Length = 124

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 51/91 (56%), Positives = 63/91 (69%), Gaps = 15/91 (16%)
 Frame = +2

Query: 47  MARPTS------------STQMGSSNTATITLENPSPQQQQ---TLVLRLSQPLSLKKKV 181
           MARPT+            ST    + TAT+T+EN + QQQQ   TLVLRL +    +KKV
Sbjct: 1   MARPTNTTTSSVTAIRPLSTPSAGTVTATVTVENNNRQQQQPPQTLVLRLKRK---EKKV 57

Query: 182 SWKEGTVDNEFLQRKSSKKCCIFHKEKSFEE 274
           +WKEGTVDNEF+Q+KSSKKCCIFHK+K F+E
Sbjct: 58  TWKEGTVDNEFMQKKSSKKCCIFHKDKPFDE 88


>ref|NP_565720.1| inhibitor-3 [Arabidopsis thaliana] gi|20197895|gb|AAM15305.1|
           Expressed protein [Arabidopsis thaliana]
           gi|21555013|gb|AAM63754.1| unknown [Arabidopsis
           thaliana] gi|106879151|gb|ABF82605.1| At2g31305
           [Arabidopsis thaliana] gi|330253431|gb|AEC08525.1|
           inhibitor-3 [Arabidopsis thaliana]
          Length = 107

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = +2

Query: 59  TSSTQMGSSNTATITLENPSPQQQQT--LVLRLSQPLSLKKKVSWKEGTVDNEFLQRKSS 232
           +++T+  SS T ++ LENP  Q Q T  LVLRL++    KKKVSWK+GTVDNEF+Q+KSS
Sbjct: 2   STATRPSSSATTSVILENPVSQSQPTERLVLRLNRK---KKKVSWKDGTVDNEFMQKKSS 58

Query: 233 KKCCIFHKEKSFEEXXXXXXXXXXXXCQSEKHSQANGGGVGTSGCHSAAE 382
           KKCCIFHK+K F+E            C    H  +  G   +S    A +
Sbjct: 59  KKCCIFHKQKPFDEDDSEEEDDNNHHC-DHNHEHSESGEASSSNDSKAVD 107


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