BLASTX nr result

ID: Coptis24_contig00025926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025926
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32687.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_002326169.1| predicted protein [Populus trichocarpa] gi|2...   128   9e-28
emb|CAN75604.1| hypothetical protein VITISV_016383 [Vitis vinifera]   128   9e-28
ref|XP_002322857.1| predicted protein [Populus trichocarpa] gi|2...   126   4e-27
ref|XP_002525182.1| hypothetical protein RCOM_0819620 [Ricinus c...   126   5e-27

>emb|CBI32687.3| unnamed protein product [Vitis vinifera]
          Length = 888

 Score =  136 bits (343), Expect = 3e-30
 Identities = 86/171 (50%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
 Frame = -2

Query: 655  AQEREDFMTQMXXXXXXXXXXXLARTRKTGKCNLRKSLAWDSAFFTSAGVLEPEELSIIN 476
            A++  D + Q              RT+K GKCNLRKSLAWDSAFFTSAGVLEPEELS + 
Sbjct: 627  AEDSADIVDQRDQVSQLSESLEPERTQKIGKCNLRKSLAWDSAFFTSAGVLEPEELSSMI 686

Query: 475  CGLKKVVKHPLPGI-EEDIRRSAESNSTFDSDNLTLESLEVDLFGDVRASIQRSSKGSNL 299
             G+ +  KH LP I E+D+RRSA+S ST +SD+LTLESLE DLF DVRASIQ+S   SN+
Sbjct: 687  EGVDRDGKHSLPRIQEDDLRRSADSISTMESDSLTLESLEADLFEDVRASIQKSRIRSNV 746

Query: 298  AY-PNSLAGPGKSGAQT-----SAAPNLRSSRKMQVVSRNMMKPTAASKRQ 164
             +  NS AG G+   +T     S    L   +K +  S   ++P AAS  Q
Sbjct: 747  THSKNSKAGTGEMEGRTIHCKCSTTYVLGKRQKTKYYSNFQVQPKAASGMQ 797


>ref|XP_002326169.1| predicted protein [Populus trichocarpa] gi|222833362|gb|EEE71839.1|
           predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  128 bits (322), Expect = 9e-28
 Identities = 81/155 (52%), Positives = 100/155 (64%), Gaps = 6/155 (3%)
 Frame = -2

Query: 583 RTRKTGKCNLRKSLAWDSAFFTSAGVLEPEEL-SIINCGLKKVVKHPLPGIEEDIRRSAE 407
           R +K  K NLRKSLAW+SAFFTSAGVLEPEEL S+I C      KH LPGIEEDI  S++
Sbjct: 82  RVKKNTKYNLRKSLAWNSAFFTSAGVLEPEELSSMIGC-----EKHMLPGIEEDIHTSSD 136

Query: 406 SNSTFDSDNLTLESL-EVDLFGDVRASIQRSSKGSNLAYPNSLAGPGKSGAQTSAAPNLR 230
           S ST  SDNLT  +L E DLFGD+RASIQRS+KG  +   NS  G  K+ ++T     +R
Sbjct: 137 SISTLASDNLTSVNLEEADLFGDIRASIQRSTKGPGMENSNSKVGSPKTESKT-----IR 191

Query: 229 SSRKMQVVSRNMM----KPTAASKRQIVNTPGPER 137
           SS K+ V SRN +    K   AS+ ++     P +
Sbjct: 192 SSEKVDVASRNRVPASEKVDIASRNKLKAKAAPNK 226


>emb|CAN75604.1| hypothetical protein VITISV_016383 [Vitis vinifera]
          Length = 760

 Score =  128 bits (322), Expect = 9e-28
 Identities = 86/194 (44%), Positives = 108/194 (55%), Gaps = 20/194 (10%)
 Frame = -2

Query: 679 FELSEVGIAQERE---DFMTQMXXXXXXXXXXXLARTRKTGKCNLRKSLAWDSAFFTSAG 509
           FEL + G + E E   D   Q                 + GK NLR+SLAWDSAFFTS G
Sbjct: 97  FELFDTGNSLELENAADIFGQREREYLPSDSLEPEIXSRDGKFNLRQSLAWDSAFFTSEG 156

Query: 508 VLEPEELSIINCGLKKVVKHPLPGIEEDIRRSAESNSTFDSDNLTLESLEVDLFGDVRAS 329
           VL+PEEL +IN G KK   H LPGI+E+++RSAESNST DSD  +LESLE+DLF D+RAS
Sbjct: 157 VLDPEELFMINKGFKKAKTHLLPGIKEELQRSAESNSTIDSDRFSLESLEIDLFEDIRAS 216

Query: 328 IQRSSK------------GSNLAYPNSLAGPGKSGAQT--SAAPNLR---SSRKMQVVSR 200
           IQ+S+             GS  + P  L  P   G     SAAP  R    + +++V +R
Sbjct: 217 IQKSTSEKLDAACQTRATGSRESIPLPLKPPKMLGQSNSISAAPTKRVPLGANRVEVENR 276

Query: 199 NMMKPTAASKRQIV 158
           N    T   KR +V
Sbjct: 277 N--AKTTLGKRLVV 288


>ref|XP_002322857.1| predicted protein [Populus trichocarpa] gi|222867487|gb|EEF04618.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  126 bits (317), Expect = 4e-27
 Identities = 69/101 (68%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
 Frame = -2

Query: 583 RTRKTGKCNLRKSLAWDSAFFTSAGVLEPEELS-IINCGLKKVVKHPLPGIEEDIRRSAE 407
           R +K  K NLRKS+AWDSAFFTSAGVLEPEELS +I  G     KH LPGIEEDI +S +
Sbjct: 78  RVKKKNKYNLRKSIAWDSAFFTSAGVLEPEELSTMIGSG-----KHMLPGIEEDIHKSTD 132

Query: 406 SNSTFDSDNLTLESLEVDLFGDVRASIQRSSKGSNLAYPNS 284
           S ST  SDNLTLE+LE DLFGD+RASIQRS+KGS++A   S
Sbjct: 133 SISTLASDNLTLENLEADLFGDIRASIQRSTKGSDVANSTS 173


>ref|XP_002525182.1| hypothetical protein RCOM_0819620 [Ricinus communis]
           gi|223535479|gb|EEF37148.1| hypothetical protein
           RCOM_0819620 [Ricinus communis]
          Length = 796

 Score =  126 bits (316), Expect = 5e-27
 Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
 Frame = -2

Query: 583 RTRKTGKCNLRKSLAWDSAFFTSAGVLEPEELSIINCGLKKVV-KHPLPGIEEDIRRSAE 407
           +TR+  K NLRKSLAWDSAFFTSAGVLEP+ELS I  G +K   KH LPGIEEDI RS +
Sbjct: 43  KTRRNEKYNLRKSLAWDSAFFTSAGVLEPDELSSIIGGAEKGERKHMLPGIEEDIHRSTD 102

Query: 406 SNSTFDSDNLTLESLEVDLFGDVRASIQRSSKGSNLAYPNSLAGPGKSGAQTSAAPNLRS 227
           S ST  +D+ TL +LE DLFGD+RASIQ+SSK  N A+    AG G   ++ +    L +
Sbjct: 103 SISTLATDSSTLGTLEDDLFGDIRASIQKSSKTLNTAFSQGKAGSGADESKHTKLSFLSA 162

Query: 226 SRKMQVVSRN 197
            +K++ V +N
Sbjct: 163 LQKVENVYQN 172


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