BLASTX nr result

ID: Coptis24_contig00025925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025925
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285039.1| PREDICTED: nodulation protein H [Vitis vinif...   182   2e-44
ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_004171579.1| PREDICTED: nodulation protein H-like [Cucumi...   179   2e-43
ref|XP_004136988.1| PREDICTED: nodulation protein H-like isoform...   179   2e-43
ref|XP_004136987.1| PREDICTED: nodulation protein H-like isoform...   179   2e-43

>ref|XP_002285039.1| PREDICTED: nodulation protein H [Vitis vinifera]
           gi|297741312|emb|CBI32443.3| unnamed protein product
           [Vitis vinifera]
          Length = 344

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/118 (73%), Positives = 98/118 (83%)
 Frame = +3

Query: 3   HKSHVHSPHEAEILARYKPKVNTALLIPDLKRVEDTTAKALEYFKSTRHIIVYYEDLVNN 182
           HKSHVHSP EAEILA+YKP +N  LLI DLK+VEDT AKAL+YF STRH I YYED++ N
Sbjct: 226 HKSHVHSPREAEILAQYKPSINATLLIRDLKQVEDTVAKALQYFNSTRHTIFYYEDVIKN 285

Query: 183 HTKLMDVQEFLRVPQRDLKSRQVKIHKAPLSEQLENWDEVLSALNGTRYESFLHLD*Q 356
            TKL+DV  FL+VPQRDL+SRQVKIHK  LSEQ+ENWDEVL  L GT+YESFLH D Q
Sbjct: 286 RTKLVDVLNFLKVPQRDLRSRQVKIHKGSLSEQVENWDEVLKTLKGTQYESFLHADYQ 343


>ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|222850249|gb|EEE87796.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/113 (76%), Positives = 99/113 (87%)
 Frame = +3

Query: 3   HKSHVHSPHEAEILARYKPKVNTALLIPDLKRVEDTTAKALEYFKSTRHIIVYYEDLVNN 182
           HKSHVHSP EAEILA+YKP +NT LLI +LK+VEDTTAKALEYFKSTRHII+YYED+V N
Sbjct: 227 HKSHVHSPREAEILAKYKPLINTTLLISNLKQVEDTTAKALEYFKSTRHIILYYEDVVKN 286

Query: 183 HTKLMDVQEFLRVPQRDLKSRQVKIHKAPLSEQLENWDEVLSALNGTRYESFL 341
           HTKL+DVQ+FL+VPQR+LKSRQVKIHK  LS  +ENWDEV  +L GT YE+ L
Sbjct: 287 HTKLLDVQDFLKVPQRELKSRQVKIHKGSLSNYVENWDEVQKSLKGTHYENLL 339


>ref|XP_004171579.1| PREDICTED: nodulation protein H-like [Cucumis sativus]
          Length = 344

 Score =  179 bits (454), Expect = 2e-43
 Identities = 82/116 (70%), Positives = 100/116 (86%)
 Frame = +3

Query: 3   HKSHVHSPHEAEILARYKPKVNTALLIPDLKRVEDTTAKALEYFKSTRHIIVYYEDLVNN 182
           HKSHVHS HEA+ILA+YKP +N  LLIP+LK+VEDTT KALEYF STRHI++YYED+V N
Sbjct: 226 HKSHVHSHHEADILAKYKPVINATLLIPNLKQVEDTTTKALEYFNSTRHIVMYYEDVVKN 285

Query: 183 HTKLMDVQEFLRVPQRDLKSRQVKIHKAPLSEQLENWDEVLSALNGTRYESFLHLD 350
            TKL DVQ+FL+VPQR LKSRQVKIH+ PLS Q++NW++V  AL G+RYE+FL+ D
Sbjct: 286 RTKLRDVQDFLKVPQRKLKSRQVKIHRGPLSNQIDNWEDVQKALQGSRYETFLNAD 341


>ref|XP_004136988.1| PREDICTED: nodulation protein H-like isoform 2 [Cucumis sativus]
          Length = 346

 Score =  179 bits (454), Expect = 2e-43
 Identities = 82/116 (70%), Positives = 100/116 (86%)
 Frame = +3

Query: 3   HKSHVHSPHEAEILARYKPKVNTALLIPDLKRVEDTTAKALEYFKSTRHIIVYYEDLVNN 182
           HKSHVHS HEA+ILA+YKP +N  LLIP+LK+VEDTT KALEYF STRHI++YYED+V N
Sbjct: 228 HKSHVHSHHEADILAKYKPVINATLLIPNLKQVEDTTTKALEYFNSTRHIVMYYEDVVKN 287

Query: 183 HTKLMDVQEFLRVPQRDLKSRQVKIHKAPLSEQLENWDEVLSALNGTRYESFLHLD 350
            TKL DVQ+FL+VPQR LKSRQVKIH+ PLS Q++NW++V  AL G+RYE+FL+ D
Sbjct: 288 RTKLRDVQDFLKVPQRKLKSRQVKIHRGPLSNQIDNWEDVQKALQGSRYETFLNAD 343


>ref|XP_004136987.1| PREDICTED: nodulation protein H-like isoform 1 [Cucumis sativus]
          Length = 371

 Score =  179 bits (454), Expect = 2e-43
 Identities = 82/116 (70%), Positives = 100/116 (86%)
 Frame = +3

Query: 3   HKSHVHSPHEAEILARYKPKVNTALLIPDLKRVEDTTAKALEYFKSTRHIIVYYEDLVNN 182
           HKSHVHS HEA+ILA+YKP +N  LLIP+LK+VEDTT KALEYF STRHI++YYED+V N
Sbjct: 253 HKSHVHSHHEADILAKYKPVINATLLIPNLKQVEDTTTKALEYFNSTRHIVMYYEDVVKN 312

Query: 183 HTKLMDVQEFLRVPQRDLKSRQVKIHKAPLSEQLENWDEVLSALNGTRYESFLHLD 350
            TKL DVQ+FL+VPQR LKSRQVKIH+ PLS Q++NW++V  AL G+RYE+FL+ D
Sbjct: 313 RTKLRDVQDFLKVPQRKLKSRQVKIHRGPLSNQIDNWEDVQKALQGSRYETFLNAD 368


Top