BLASTX nr result
ID: Coptis24_contig00025923
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025923 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283086.1| PREDICTED: arabinogalactan peptide 22 [Vitis... 72 4e-11 gb|AFK43645.1| unknown [Lotus japonicus] 72 6e-11 gb|AEC10998.1| hypothetical protein [Camellia sinensis] 71 8e-11 ref|XP_002872092.1| hypothetical protein ARALYDRAFT_910430 [Arab... 71 8e-11 ref|NP_566070.3| arabinogalactan protein 16 [Arabidopsis thalian... 70 2e-10 >ref|XP_002283086.1| PREDICTED: arabinogalactan peptide 22 [Vitis vinifera] gi|147854885|emb|CAN82800.1| hypothetical protein VITISV_022699 [Vitis vinifera] gi|297738720|emb|CBI27965.3| unnamed protein product [Vitis vinifera] Length = 65 Score = 72.4 bits (176), Expect = 4e-11 Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 2/65 (3%) Frame = -2 Query: 384 MESARISFPVMALWAFVVALVFSTAM--AQSPEPAVAPTSDGVAIDQGIAYVLMFAALLL 211 ME RISF VM + A V+AL +++ SP PA AP+SDGVAIDQGIAYVLM AL L Sbjct: 1 MEMFRISFMVMGVLALVLALGIPSSINAESSPAPAPAPSSDGVAIDQGIAYVLMLLALAL 60 Query: 210 TYIIH 196 TYIIH Sbjct: 61 TYIIH 65 >gb|AFK43645.1| unknown [Lotus japonicus] Length = 63 Score = 71.6 bits (174), Expect = 6e-11 Identities = 35/63 (55%), Positives = 43/63 (68%) Frame = -2 Query: 384 MESARISFPVMALWAFVVALVFSTAMAQSPEPAVAPTSDGVAIDQGIAYVLMFAALLLTY 205 ME R+ VM++ A +A V + AQ P PA APTSDG+ +DQG+AYVLM AL LTY Sbjct: 1 MEVFRVQLFVMSILALAIAFVIPSINAQVPAPAPAPTSDGITVDQGVAYVLMMLALALTY 60 Query: 204 IIH 196 IIH Sbjct: 61 IIH 63 >gb|AEC10998.1| hypothetical protein [Camellia sinensis] Length = 68 Score = 71.2 bits (173), Expect = 8e-11 Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 4/67 (5%) Frame = -2 Query: 384 MESARISFPVMALWAFVVALVFSTAMAQS----PEPAVAPTSDGVAIDQGIAYVLMFAAL 217 M+ R++F VM A V+ALV + A + P PA APTSDGVA+DQGIAYVLM AL Sbjct: 1 MKMLRVNFVVMGFMALVLALVVPSINAHAHVPAPAPAPAPTSDGVAVDQGIAYVLMLLAL 60 Query: 216 LLTYIIH 196 LTYIIH Sbjct: 61 ALTYIIH 67 >ref|XP_002872092.1| hypothetical protein ARALYDRAFT_910430 [Arabidopsis lyrata subsp. lyrata] gi|297317929|gb|EFH48351.1| hypothetical protein ARALYDRAFT_910430 [Arabidopsis lyrata subsp. lyrata] Length = 63 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/63 (55%), Positives = 44/63 (69%) Frame = -2 Query: 384 MESARISFPVMALWAFVVALVFSTAMAQSPEPAVAPTSDGVAIDQGIAYVLMFAALLLTY 205 M S+R+ F V + + + A++ A AQS PA APTSDG IDQGIAYVLM AL+LTY Sbjct: 1 MSSSRLFFGVSTIVSIIFAILLPMAQAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTY 60 Query: 204 IIH 196 +IH Sbjct: 61 LIH 63 >ref|NP_566070.3| arabinogalactan protein 16 [Arabidopsis thaliana] gi|297828351|ref|XP_002882058.1| hypothetical protein ARALYDRAFT_483786 [Arabidopsis lyrata subsp. lyrata] gi|75100629|sp|O82337.1|AGP16_ARATH RecName: Full=Arabinogalactan peptide 16; Short=AG-peptide 16; Flags: Precursor gi|10880509|gb|AAG24284.1|AF195897_1 arabinogalactan protein [Arabidopsis thaliana] gi|15294170|gb|AAK95262.1|AF410276_1 At2g46330/F11C10.2 [Arabidopsis thaliana] gi|4559376|gb|AAD23036.1| expressed protein [Arabidopsis thaliana] gi|20197373|gb|AAM15047.1| expressed protein [Arabidopsis thaliana] gi|20453295|gb|AAM19886.1| At2g46330/F11C10.2 [Arabidopsis thaliana] gi|21553759|gb|AAM62852.1| unknown [Arabidopsis thaliana] gi|297327897|gb|EFH58317.1| hypothetical protein ARALYDRAFT_483786 [Arabidopsis lyrata subsp. lyrata] gi|330255586|gb|AEC10680.1| arabinogalactan protein 16 [Arabidopsis thaliana] Length = 73 Score = 70.1 bits (170), Expect = 2e-10 Identities = 37/65 (56%), Positives = 48/65 (73%) Frame = -2 Query: 378 SARISFPVMALWAFVVALVFSTAMAQSPEPAVAPTSDGVAIDQGIAYVLMFAALLLTYII 199 ++R S AL++FV A++ S A AQS PA APTSDG +IDQGIAY+LM AL+LTY+I Sbjct: 2 ASRNSVTGFALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLI 61 Query: 198 H*QDS 184 H D+ Sbjct: 62 HPLDA 66