BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025919
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   124   8e-27
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002884184.1| pentatricopeptide repeat-containing protein ...   118   6e-25
ref|NP_179484.1| pentatricopeptide repeat-containing protein [Ar...   118   6e-25

>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -3

Query: 203 ELGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQK 24
           E GCVP VCTYNAILGMLGKKSR EEM+ +LCDM+SNGC PN +TWNTMLAMCGNKG  K
Sbjct: 413 ESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472

Query: 23  YVNRVFR 3
           YVNRVFR
Sbjct: 473 YVNRVFR 479


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -3

Query: 203 ELGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQK 24
           E GCVP VCTYNAILGMLGKKSR EEM+ +LCDM+SNGC PN +TWNTMLAMCGNKG  K
Sbjct: 413 ESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472

Query: 23  YVNRVFR 3
           YVNRVFR
Sbjct: 473 YVNRVFR 479


>ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|222870547|gb|EEF07678.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/67 (80%), Positives = 58/67 (86%)
 Frame = -3

Query: 203 ELGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQK 24
           E GC P VCTYNAILGMLGKKS+SEEMM ILCDMK +GC PNRITWNTML+MCGNKG  K
Sbjct: 413 ESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHK 472

Query: 23  YVNRVFR 3
           YV RVF+
Sbjct: 473 YVKRVFQ 479


>ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330024|gb|EFH60443.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 829

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/67 (76%), Positives = 57/67 (85%)
 Frame = -3

Query: 203 ELGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQK 24
           E GCVP  CTYNA+L MLGKKSRS EM+ +LCDMKSNGC PNR TWNT+LA+CGNKG  K
Sbjct: 421 EAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDK 480

Query: 23  YVNRVFR 3
           +VNRVFR
Sbjct: 481 FVNRVFR 487


>ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099137|sp|O64624.1|PP163_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g18940 gi|3004555|gb|AAC09028.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14
           [Arabidopsis thaliana] gi|38564280|gb|AAR23719.1|
           At2g18940/F19F24.14 [Arabidopsis thaliana]
           gi|330251736|gb|AEC06830.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/67 (76%), Positives = 57/67 (85%)
 Frame = -3

Query: 203 ELGCVPTVCTYNAILGMLGKKSRSEEMMSILCDMKSNGCVPNRITWNTMLAMCGNKGAQK 24
           E GCVP  CTYNA+L +LGKKSRS EM+ +LCDMKSNGC PNR TWNTMLA+CGNKG  K
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473

Query: 23  YVNRVFR 3
           +VNRVFR
Sbjct: 474 FVNRVFR 480