BLASTX nr result

ID: Coptis24_contig00025915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025915
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana...   182   3e-44
ref|XP_002893698.1| hypothetical protein ARALYDRAFT_473391 [Arab...   182   3e-44
gb|AAM65181.1| unknown [Arabidopsis thaliana]                         182   3e-44
ref|XP_003534306.1| PREDICTED: uncharacterized protein LOC100807...   179   2e-43
gb|AFK45792.1| unknown [Lotus japonicus]                              178   5e-43

>ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana]
           gi|10801363|gb|AAG23435.1|AC084165_1 unknown protein
           [Arabidopsis thaliana]
           gi|12321470|gb|AAG50795.1|AC074309_12 unknown protein
           [Arabidopsis thaliana] gi|14532512|gb|AAK63984.1|
           At1g32080/F3C3_12 [Arabidopsis thaliana]
           gi|20855884|gb|AAM26636.1| At1g32080/F3C3_12
           [Arabidopsis thaliana] gi|332193313|gb|AEE31434.1|
           putative membrane protein [Arabidopsis thaliana]
          Length = 512

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/120 (80%), Positives = 101/120 (84%)
 Frame = +1

Query: 1   LEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQTMLDKLHLQD 180
           LEP+LTVSILPRCITVALALSIVS FEGTN S              NFVQ +LDKL L+D
Sbjct: 393 LEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGANFVQVVLDKLRLRD 452

Query: 181 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGTLLCSIPAVRQSLLFVVG 360
           PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFG+LLCS+PAVRQSLL VVG
Sbjct: 453 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 512


>ref|XP_002893698.1| hypothetical protein ARALYDRAFT_473391 [Arabidopsis lyrata subsp.
           lyrata] gi|297339540|gb|EFH69957.1| hypothetical protein
           ARALYDRAFT_473391 [Arabidopsis lyrata subsp. lyrata]
          Length = 506

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/120 (80%), Positives = 101/120 (84%)
 Frame = +1

Query: 1   LEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQTMLDKLHLQD 180
           LEP+LTVSILPRCITVALALSIVS FEGTN S              NFVQ +LDKL L+D
Sbjct: 387 LEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGANFVQVVLDKLRLRD 446

Query: 181 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGTLLCSIPAVRQSLLFVVG 360
           PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFG+LLCS+PAVRQSLL VVG
Sbjct: 447 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 506


>gb|AAM65181.1| unknown [Arabidopsis thaliana]
          Length = 512

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/120 (80%), Positives = 101/120 (84%)
 Frame = +1

Query: 1   LEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQTMLDKLHLQD 180
           LEP+LTVSILPRCITVALALSIVS FEGTN S              NFVQ +LDKL L+D
Sbjct: 393 LEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGANFVQVVLDKLRLRD 452

Query: 181 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGTLLCSIPAVRQSLLFVVG 360
           PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFG+LLCS+PAVRQSLL VVG
Sbjct: 453 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 512


>ref|XP_003534306.1| PREDICTED: uncharacterized protein LOC100807656 [Glycine max]
          Length = 456

 Score =  179 bits (454), Expect = 2e-43
 Identities = 94/120 (78%), Positives = 99/120 (82%)
 Frame = +1

Query: 1   LEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQTMLDKLHLQD 180
           LEP+LTVSILPRCITVALALSIVSFFEG N S              NFVQ  LDKL L+D
Sbjct: 337 LEPSLTVSILPRCITVALALSIVSFFEGANASVTAAAVVVTGLVGANFVQATLDKLRLRD 396

Query: 181 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGTLLCSIPAVRQSLLFVVG 360
           PIARGIATASS HGLGTAALSAKEPEALPFCAIAYALTGIFG++LCSIPAVRQSLL V+G
Sbjct: 397 PIARGIATASSCHGLGTAALSAKEPEALPFCAIAYALTGIFGSILCSIPAVRQSLLAVIG 456


>gb|AFK45792.1| unknown [Lotus japonicus]
          Length = 290

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/120 (76%), Positives = 98/120 (81%)
 Frame = +1

Query: 1   LEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQTMLDKLHLQD 180
           LEP+LTVSILPRCITVALALSIVS F+G NPS              NFVQ  LDKL  QD
Sbjct: 171 LEPSLTVSILPRCITVALALSIVSLFDGANPSLTAAVVVVTGLVGANFVQATLDKLRFQD 230

Query: 181 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGTLLCSIPAVRQSLLFVVG 360
           PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYAL GIFG+LLCSIPAVRQSL+ ++G
Sbjct: 231 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALNGIFGSLLCSIPAVRQSLIAIIG 290


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