BLASTX nr result

ID: Coptis24_contig00025900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025900
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282364.1| PREDICTED: uncharacterized protein LOC100245...   114   1e-23
emb|CAN75323.1| hypothetical protein VITISV_003765 [Vitis vinifera]   114   1e-23
ref|NP_001242678.1| uncharacterized protein LOC100804037 [Glycin...   108   5e-22
ref|XP_003549618.1| PREDICTED: uncharacterized protein LOC100781...   106   2e-21
ref|XP_003525464.1| PREDICTED: uncharacterized protein LOC100787...   106   2e-21

>ref|XP_002282364.1| PREDICTED: uncharacterized protein LOC100245004 [Vitis vinifera]
           gi|297733765|emb|CBI15012.3| unnamed protein product
           [Vitis vinifera]
          Length = 326

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/108 (52%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = +2

Query: 2   EDEAWKPRLKKIHPAWXXXXXXXXXXXXXXXXXXXXXXDGGGIFYFYTQWTFTLVTVYFG 181
           EDE WKP LK+IHP W                      DGG IFYFYTQWTFTL+T+YFG
Sbjct: 60  EDEVWKPCLKEIHPVWLLAFRVFAFFVLLVLLIINAIVDGGSIFYFYTQWTFTLITIYFG 119

Query: 182 LGSLLSVYGCYKYRNKVSGARM---GSDAEQGMYVSPTHDENTNACNS 316
           LGSLLS+YGCY+Y NKV G  +   G DAEQG      H EN N  N+
Sbjct: 120 LGSLLSMYGCYQYHNKVGGESVDDAGLDAEQGR----VHGENFNLSNT 163


>emb|CAN75323.1| hypothetical protein VITISV_003765 [Vitis vinifera]
          Length = 286

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/108 (52%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = +2

Query: 2   EDEAWKPRLKKIHPAWXXXXXXXXXXXXXXXXXXXXXXDGGGIFYFYTQWTFTLVTVYFG 181
           EDE WKP LK+IHP W                      DGG IFYFYTQWTFTL+T+YFG
Sbjct: 60  EDEVWKPCLKEIHPVWLLAFRVFAFFVLLVLLIINAIVDGGSIFYFYTQWTFTLITIYFG 119

Query: 182 LGSLLSVYGCYKYRNKVSGARM---GSDAEQGMYVSPTHDENTNACNS 316
           LGSLLS+YGCY+Y NKV G  +   G DAEQG      H EN N  N+
Sbjct: 120 LGSLLSMYGCYQYHNKVGGESVDDAGLDAEQGR----VHGENFNLSNT 163


>ref|NP_001242678.1| uncharacterized protein LOC100804037 [Glycine max]
           gi|255636033|gb|ACU18361.1| unknown [Glycine max]
          Length = 348

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = +2

Query: 2   EDEAWKPRLKKIHPAWXXXXXXXXXXXXXXXXXXXXXXDGGGIFYFYTQWTFTLVTVYFG 181
           EDE W+P LK IHPAW                      DGG IFY+YTQWTFT +T+YFG
Sbjct: 76  EDETWRPCLKGIHPAWLMALRIVAFIALLVLLIINAIVDGGSIFYYYTQWTFTSITIYFG 135

Query: 182 LGSLLSVYGCYKYRNKVSGARMGS---DAEQGMYVSPTHDENTN 304
           LGSLLS+YGCY++  K +G ++G+   DAEQGMY +    +++N
Sbjct: 136 LGSLLSIYGCYQHHKKAAGDKIGNVDGDAEQGMYDASALPQSSN 179


>ref|XP_003549618.1| PREDICTED: uncharacterized protein LOC100781639 [Glycine max]
          Length = 349

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
 Frame = +2

Query: 2   EDEAWKPRLKKIHPAWXXXXXXXXXXXXXXXXXXXXXXDGGGIFYFYTQWTFTLVTVYFG 181
           EDE W+P LK I+P W                      DGG IFYFYTQWTF  VT+YFG
Sbjct: 77  EDEIWRPCLKGINPVWLLGFRVFAFAVLLVLLILIATEDGGSIFYFYTQWTFAAVTIYFG 136

Query: 182 LGSLLSVYGCYKYRNKVSGARMGS---DAEQGMYVSPTHDENTNACN 313
           LGSLLS++GCY++  K SG ++G+    AEQG+Y +PT  +N+N  N
Sbjct: 137 LGSLLSMHGCYQHLKKASGGKVGNVDGYAEQGIYDAPTPPQNSNPSN 183


>ref|XP_003525464.1| PREDICTED: uncharacterized protein LOC100787604 [Glycine max]
          Length = 350

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
 Frame = +2

Query: 2   EDEAWKPRLKKIHPAWXXXXXXXXXXXXXXXXXXXXXXDGGGIFYFYTQWTFTLVTVYFG 181
           EDE W+P LK IHP W                      DGG IFYFYTQWTF  VT+YFG
Sbjct: 78  EDEIWRPCLKGIHPVWLLGFRVFAFVVLLVLLILTATEDGGSIFYFYTQWTFAAVTIYFG 137

Query: 182 LGSLLSVYGCYKYRNKVSGARMGS---DAEQGMYVSPTHDENTNACN 313
           LGSLLS++GCY++  K SG ++G+   DAEQG+Y + T  + +N  N
Sbjct: 138 LGSLLSMHGCYQHLKKASGDKVGNVDGDAEQGIYDASTPPQGSNPSN 184


Top